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Volumn 171, Issue 2 SPEC. ISS., 2007, Pages 55-67

Biological Transactions for Quantitative Models

Author keywords

biological transactions; stochastic calculus; Systems Biology

Indexed keywords

MATHEMATICAL MODELS; SEMANTICS; SYNTACTICS;

EID: 34250811943     PISSN: 15710661     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.entcs.2007.05.007     Document Type: Article
Times cited : (9)

References (21)
  • 1
    • 0242308133 scopus 로고    scopus 로고
    • On Representing Biological Systems through Multiset Rewriting
    • Proc. of Workshop on Computational Methods in Biomathematics (CMB'03), Springer-Verlag
    • Bistarelli S., Cervesato I., Lenzini G., Marangoni R., and Martinelli F. On Representing Biological Systems through Multiset Rewriting. Proc. of Workshop on Computational Methods in Biomathematics (CMB'03). LNCS 2809 (2003), Springer-Verlag
    • (2003) LNCS , vol.2809
    • Bistarelli, S.1    Cervesato, I.2    Lenzini, G.3    Marangoni, R.4    Martinelli, F.5
  • 3
    • 34250853078 scopus 로고    scopus 로고
    • Blossey, R., C. Kuttler and J. Niehren, Gene regulation in the π-calculus: simulating cooperativity at the lambda switch, Proc. of BioConcur 2004, 2004.
  • 4
    • 26444563415 scopus 로고    scopus 로고
    • A trace semantics for long-running transactions
    • Proc. of 25 year of CSP, Springer-Verlag
    • Butler M., Hoare T., and Ferreira C. A trace semantics for long-running transactions. Proc. of 25 year of CSP. LNCS 3525 (2005), Springer-Verlag 133-150
    • (2005) LNCS , vol.3525 , pp. 133-150
    • Butler, M.1    Hoare, T.2    Ferreira, C.3
  • 5
    • 0344118797 scopus 로고    scopus 로고
    • A Calculus for Long-running Transactions
    • Proc. of the 6th IFIP International Conference on Formal Methods for Open Object-based Distributed Systems (FMOODS'03), Springer-Verlag
    • Bocchi L., Laneve C., and Zavattaro G. A Calculus for Long-running Transactions. Proc. of the 6th IFIP International Conference on Formal Methods for Open Object-based Distributed Systems (FMOODS'03). LNCS 2884 (2003), Springer-Verlag
    • (2003) LNCS , vol.2884
    • Bocchi, L.1    Laneve, C.2    Zavattaro, G.3
  • 6
    • 19144370269 scopus 로고    scopus 로고
    • On the Serializability of Transactions in JavaSpaces
    • Proc. o CONCOORD'01, Springer-Verlag
    • Busi N., and Zavattaro G. On the Serializability of Transactions in JavaSpaces. Proc. o CONCOORD'01. LNCS 54 (2001), Springer-Verlag
    • (2001) LNCS , vol.54
    • Busi, N.1    Zavattaro, G.2
  • 8
    • 4544321024 scopus 로고    scopus 로고
    • Modelling and Simulation of IntraCellular Dynamics: Choosing an Appropriate Framework
    • Cho K.H., Kolch W., Ullah M., and Wolkenhauer O. Modelling and Simulation of IntraCellular Dynamics: Choosing an Appropriate Framework. IEEE Transactions on NanoBioScience 3 (2004) 200-207
    • (2004) IEEE Transactions on NanoBioScience , vol.3 , pp. 200-207
    • Cho, K.H.1    Kolch, W.2    Ullah, M.3    Wolkenhauer, O.4
  • 9
    • 34250798722 scopus 로고    scopus 로고
    • Ciocchetta, F. and C. Priami, "The stochastic π-calculus with biological transactions", Technical Report TR-02-2006, The Microsoft Research-University of Trento Centre for Computational and Systems Biology, 2006.
  • 11
    • 34250856448 scopus 로고    scopus 로고
    • Danos, V. and J. Krivine, Formal molecular biology done in CCS-R, Proc. of Workshop on Concurrent Models in MolecularBiology (BioConcur '03), 2003.
  • 12
    • 35248870587 scopus 로고    scopus 로고
    • Core Formal Molecular Biology
    • Proc. of ESOP'03, Springer-Verlag
    • Danos V., and Laneve C. Core Formal Molecular Biology. Proc. of ESOP'03. LNCS 2618 (2003), Springer-Verlag 302-318
    • (2003) LNCS , vol.2618 , pp. 302-318
    • Danos, V.1    Laneve, C.2
  • 13
    • 33645429016 scopus 로고
    • Exact stochastic simulation of coupled chemical reactions
    • Gillespie D.T. Exact stochastic simulation of coupled chemical reactions. Journal of Physical Chemistry 81 (1977) 2340-2361
    • (1977) Journal of Physical Chemistry , vol.81 , pp. 2340-2361
    • Gillespie, D.T.1
  • 14
    • 0036500993 scopus 로고    scopus 로고
    • Systems Biology: A Brief Overview
    • Kitano H. Systems Biology: A Brief Overview. Science 295 (2002) 1662-1664
    • (2002) Science , vol.295 , pp. 1662-1664
    • Kitano, H.1
  • 15
    • 24644473737 scopus 로고    scopus 로고
    • Foundations of web transactions
    • Proc. of Foundations of Software Science and Computation Structure (FOSSACS 2005), Springer-Verlag
    • Laneve C., and Zavattaro G. Foundations of web transactions. Proc. of Foundations of Software Science and Computation Structure (FOSSACS 2005). LNCS 3441 (2005), Springer-Verlag 282-298
    • (2005) LNCS , vol.3441 , pp. 282-298
    • Laneve, C.1    Zavattaro, G.2
  • 17
    • 0035888407 scopus 로고    scopus 로고
    • Application of a stochastic name-passing calculus to representation and simulation of molecular processes
    • Priami C., Regev A., Silverman W., and Shapiro E. Application of a stochastic name-passing calculus to representation and simulation of molecular processes. Information Processing Letters 80 (2001) 25-31
    • (2001) Information Processing Letters , vol.80 , pp. 25-31
    • Priami, C.1    Regev, A.2    Silverman, W.3    Shapiro, E.4
  • 18
    • 34250891665 scopus 로고    scopus 로고
    • Priami, C. and P. Quaglia, Beta-binders for biological interactions, Proc. of Computational Methods in Systems Biology '04 (CMSB04), 2004.
  • 19
    • 34250897687 scopus 로고    scopus 로고
    • Regev, A., Representation and simulation of molecular pathways in the stochastic π-calculus, Proc. of the 2nd workshop on Computation of Biochemical Pathways and Genetic Networks, 2001.
  • 21
    • 4244101701 scopus 로고
    • Some Further Studies of Nonlinear Oscillators in Chemical Systems
    • Tyson J. Some Further Studies of Nonlinear Oscillators in Chemical Systems. J. Chem. Phys. 58 (1973) 3919-3930
    • (1973) J. Chem. Phys. , vol.58 , pp. 3919-3930
    • Tyson, J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.