Sum frequency generation and solid-state NMR study of the structure, orientation, and dynamics of polystyrene-adsorbed peptides

Proceedings of the National Academy of Sciences of the United States of America

Volumn 107, Issue 30, 2010, Pages 13288-13293

  Weidner, Tobias ^a   Breen, Nicholas F ^b   Li, Kun ^b   Drobny, Gary P ^b   Castner, David G ^a,c  

^a University of Washington   (United States)

^b UNIVERSITY OF WASHINGTON   (United States)

^c University of Washington   (United States)

Author keywords

Isotope labels; Protein; Solid liquid interface; Surface

Indexed keywords

AMINO ACID; DEUTERIUM; ISOPROPYL THIOGALACTOSIDE; LEUCINE; LYSINE; PEPTIDE; POLYSTYRENE; POLYSTYRENE DERIVATIVE;

ADSORPTION; ARTICLE; CORRELATION ANALYSIS; DYNAMICS; HUMAN; LIQUID; NUCLEAR MAGNETIC RESONANCE; ORIENTATION; PRIORITY JOURNAL; PROTEIN SECONDARY STRUCTURE; PROTON NUCLEAR MAGNETIC RESONANCE; QUANTITATIVE ANALYSIS; SOLID STATE; SPECTROSCOPY; SURFACE PROPERTY; ALGORITHM; AMINO ACID SEQUENCE; CHEMICAL MODEL; CHEMICAL STRUCTURE; CHEMISTRY; MOLECULAR DYNAMICS; PROCEDURES;

ADSORPTION; ALGORITHMS; AMINO ACID SEQUENCE; LEUCINE; LYSINE; MODELS, CHEMICAL; MODELS, MOLECULAR; MOLECULAR DYNAMICS SIMULATION; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PEPTIDES; POLYSTYRENES; PROTEIN STRUCTURE, SECONDARY; SPECTRUM ANALYSIS;

EID: 77955786270     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1003832107     Document Type: Article

References (56)

1. Healy KE (1999) Molecular engineering of materials for bioreactivity. Curr Opin Solid St M 4:381-387.
2. Angelova N, Hunkeler D (1999) Rationalizing the design of polymeric biomaterials. Trends Biotechnol 17:409-421.
3. Ratner BD, Bryant SJ (2004) Biomaterials: where we have been and where we are going. Annu Rev Biomed Eng 6:41-75.
4. Vasita R, Shanmugam K, Katti DS (2008) Improved biomaterials for tissue engineering applications: surface modification of polymers. Curr Top Med Chem 8:341-353.
5. Borkenhagen M, Clemence JF, Sigrist H, Aebischer P (1998) Three-dimensional extracellular matrix engineering in the nervous system. J Biomed Mater Res 40:392-400.
6. Rezania A, Healy KE (1999) Biomimetic peptide surfaces that regulate adhesion, spreading, cytoskeletal organization, and mineralization of the matrix deposited by osteoblast-like cells. Biotechnol Progr 15:19-32.
7. Venugopal J, Low S, Choon AT, Ramakrishna S (2008) Interaction of cells and nanofiber scaffolds in tissue engineering. J Biomed Mater Res B 84B:34-48.
8. Wang J, Buck SM, Chen Z (2002) Sum frequency generation vibrational spectroscopy studies on protein adsorption. J Phys Chem B 106:11666-11672.
9. Samuel NT (2005) Structural characterization of adsorbed helical and beta-sheet peptides (University of Washington, Seattle, WA).
10. Mermut O, et al. (2006) In situ adsorption studies of a 14-amino acid leucine-lysine peptide onto hydrophobic polystyrene and hydrophilic silica surfaces using quartz crystal microbalance, atomic force microscopy, and sum frequency generation vibrational spectroscopy. J Am Chem Soc 128:3598-3607.
11. Wang J, Chen X, Clarke ML, Chen Z (2006) Vibrational spectroscopic studies on fibrinogen adsorption at polystyrene/protein solution interfaces: hydrophobic side chain and secondary structure changes. J Phys Chem B 110:5017-5024.
12. York RL, et al. (2007) Influence of ionic strength on the adsorption of a model peptide on hydrophilic silica and hydrophobic polystyrene surfaces: insight from SFG vibrational spectroscopy. J Phys Chem C 111:8866-8871.
13. Phillips DC, et al. (2007) Side chain, chain length, and sequence effects on amphiphilic peptide adsorption at hydrophobic and hydrophilic surfaces studied by sum frequency generation vibrational spectroscopy and quartz crystal microbalance. J Phys Chem C 111:255-261.
14. Chen X, Wang J, Sniadecki JJ, Even MA, Chen Z (2005) Probing alpha-helical and beta-sheet structures of peptides at solid/liquid interfaces with SFG. Langmuir 21:2662-2664.
15. Jung SY, et al. (2003) The Vroman effect: a molecular level description of fibrinogen displacement. J Am Chem Soc 125:12782-12786.
16. Weidner T, et al. (2010) Assembly and structure of alpha-helical peptide films on hydrophobic fluorocarbon surfaces. Biointerphases 5:9-16.
17. Shen YR (1984) The principles of nonlinear optics (John Wiley & Sons, New York), 1 Ed.
18. Weidner T, Apte JS, Gamble LJ, Castner DG (2010) Probing the orientation and conformation of alpha-helix and beta-strand model peptides on self-assembled monolayers using sum frequency generation and NEXAFS spectroscopy. Langmuir 26:3433-3440.
19. Singh BR, ed. (2000) Infrared analysis of peptides and proteins (American Chemical Society, Washington D.C.), Vol 750.
20. Samuel NT, McCrea KR, Gamble LJ, Ward RS, Castner DG (2005) In situ sum frequency generation characterization of adsorbed alpha-helical peptides. Abstr Pap Am Chem S 229:U671-U671.
21. Clarke ML, Wang J, Chen Z (2005) Conformational changes of fibrinogen after adsorption. J Phys Chem B 109:22027-22035.
22. Igumenova TI, et al. (2004) Assignments of carbon NMR resonances for microcrystalline ubiquitin. J Am Chem Soc 126:6720-6727.
23. van Rossum BJ, Castellani F, Rehbein K, Pauli J, Oschkinat H (2001) Assignment of the nonexchanging protons of the alpha-spectrin SH3 domain by two- and three-dimensional H-1-C-13 solid-state magic-angle spinning NMR and comparison of solution and solid-state proton chemical shifts. Chembiochem 2:906-914.
24. Gibson JM, Raghunathan V, Popham JM, Stayton PS, Drobny GP (2005) A REDOR NMR study of a phosphorylated statherin fragment bound to hydroxyapatite crystals. J Am Chem Soc 127:9350-9351.
25. Goobes G, et al. (2006) Folding of the C-terminal bacterial binding domain in statherin upon adsorption onto hydroxyapatite crystals. Proc Nat'l Acad Sci USA 103:16083-16088.
26. Raghunathan V, et al. (2006) Homonuclear and heteronuclear NMR studies of a statherin fragment bound to hydroxyapatite crystals. J Phys Chem B 110:9324-9332.
27. Ndao M, et al. (2009) A 13C{31P} REDOR NMR investigation of the role of glutamic acid residues in statherin- hydroxyapatite recognition. Langmuir 25:12136-12143.
28. Makrodimitris K, Masica DL, Kim ET, Gray JJ (2007) Structure prediction of protein-solid surface interactions reveals a molecular recognition motif of statherin for hydroxyapatite. J Am Chem Soc 129:13713-13722.
29. Masica DL, Gray JJ (2009) Solution- and adsorbed-state structural ensembles predicted for the statherin-hydroxyapatite system. Biophys J 96:3082-3091.
30. Batchelder LS, Sullivan CE, Jelinski LW, Torchia DA (1982) Characterization of leucine side-chain reorientation in collagen fibrils by solid-state 2H NMR. Proc Nat'l Acad Sci -Bio 79:386-389.
31. Fernandez VL, Reimer JA, Denn MM (1992) Magnetic resonance studies of polypeptides adsorbed on silica and hydroxyapatite surfaces. J Am Chem Soc 114:9634-9642.
32. Abu-Baker S, et al. (2007) Side chain and backbone dynamics of phospholamban in phospholipid bilayers utilizing H-2 and N-15 solid-state NMR spectroscopy. Biochemistry 46:11695-11706.
33. Ying WW, Irvine SE, Beekman RA, Siminovitch DJ, Smith SO (2000) Deuterium NMR reveals helix packing interactions in phospholamban. J Am Chem Soc 122:11125-11128.
34. Long JR, Mills FD, Ganesh OK, Antharam VC, Farver RS (2010) Partitioning, dynamics, and orientation of lung surfactant peptide KL4 in phospholipid bilayers. BBA-Biomembranes 1798:216-222.
35. Reif B, et al. (2006) Protein side-chain dynamics observed by solution- and solid-state NMR: comparative analysis of methyl H-2 relaxation data. J Am Chem Soc 128:12354-12355.
36. Agarwal V, Reif B (2008) Residual methyl protonation in perdeuterated proteins for multi-dimensional correlation experiments in MAS solid-state NMR spectroscopy. J Magn Reson 194:16-24.
37. Goobes G, et al. (2006) A REDOR study of diammonium hydrogen phosphate: a model for distance measurements from adsorbed molecules to surfaces. Solid State Nucl Mag 29:242-250.
38. Shaw WJ, Ferris K, Tarasevich B, Larson JL (2008) The structure and orientation of the C-terminus of LRAP. Biophys J 94:3247-3257.
39. DeGrado WF, Lear JD (1985) Induction of peptide conformation at apolar water interfaces. 1. A study with model peptides of defined hydrophobic periodicity. J Am Chem Soc 107:7684-7689.
40. Long JR, Oyler N, Drobny GP, Stayton PS (2002) Assembly of alpha-helical peptide coatings on hydrophobic surfaces. J Am Chem Soc 124:6297-6303.
41. Breen NF, Weidner T, Li K, Castner DG, Drobny GP (2009) A solid-state deuterium NMR and sum frequency generation study of the side chain dynamics of peptides adsorbed onto surfaces. J Am Chem Soc 131:14148-14149.
42. 15N isotope labels. J Phys Chem B 113:15423-15426.
43. Apte JS, Collier G, Latour RA, Gamble LJ, Castner DG (2009) XPS and ToF-SIMS investigation of α-helical and β-strand peptide adsorption onto SAMs. Langmuir 26:3423-3432.
44. Bain CD, Davies PB, Ong TH, Ward RN, Brown MA (1991) Quantitative- analysis of monolayer composition by sum frequency vibrational spectroscopy. Langmuir 7:1563-1566.
45. Zhuang X, Miranda PB, Kim D, Shen YR (1999) Mapping molecular orientation and conformation at interfaces by surface nonlinear optics. Phys Rev B 59:12632-12640.
46. Kataoka S, Cremer PS (2006) Probing molecular structure at interfaces for comparison with bulk solution behavior: water/2-propanol mixtures monitored by vibrational sum frequency spectroscopy. J Am Chem Soc 128:5516-5522.
47. Vugmeyster L, et al. (2009) Probing the dynamics of a protein hydrophobic core by deuteron solid-state nuclear magnetic resonance spectroscopy. J Am Chem Soc 131:13651-13658.
48. Torchia DA, Szabo A (1982) Spin-lattice relaxation in solids. J Magn Reson 49:107-121.
49. Greenfield MS, et al. (1987) Deuterium quadrupole-echo NMR-spectroscopy. 3. Practical aspects of line shape calculations for multiaxis rotational processes. J Magn Reson 72:89-107.
50. Vold RL, Vold RR (1991) Deuterium relaxation in molecular solids. Advances in Magnetic and Optical Resonance, ed W Warren (Academic Press, San Diego), Vol 16, pp 85-171.
51. Yang CSC, Richter LJ, Stephenson JC, Briggman KA (2002) In situ vibrational resonant sum frequency spectroscopic study of the self-assembly of dioctadecyl disulfide on gold. Langmuir 18:7549-7556.
52. Nyquist RA (2001) Interpreting infrared, Raman, and nuclear magnetic resonance spectra (Academic Press, London).
53. Polavarapu PL, Smith HE (1988) Methine and methyl stretching vibrations in substituted phenylethanes. J Phys Chem-US 92:1774-1777.
54. Kinnaman CS, Cremeens ME, Romesberg FE, Corcelli SA (2006) Infrared line shape of an r-Carbon deuterium-labeled amino acid. J Am Chem Soc 128:13334-13335.
55. Lambert AG, Neivandt DJ, Briggs AM, Usadi EW, Davies PB (2002) Interference effects in sum frequency spectra from monolayers on composite dielectric/metal substrates. J Phys Chem B 106:5461-5469.
56. McGall SJ, Davies PB, Neivandt DJ (2004) Interference effects in sum frequency vibrational spectra of thin polymer films: an experimental and modeling investigation. J Phys Chem B 108:16030-16039.