Arenicella xantha gen. nov., sp. nov., a gammaproteobacterium isolated from a marine sandy sediment

International Journal of Systematic and Evolutionary Microbiology

Volumn 60, Issue 8, 2010, Pages 1832-1836

  Romanenko, Lyudmila A ^a   Tanaka, Naoto ^b   Frolova, Galina M ^a   Mikhailov, Valery V ^a  

^a PACIFIC INSTITUTE OF BIOORGANIC CHEMISTRY   (Russian Federation)

^b TOKYO UNIVERSITY OF AGRICULTURE   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

AMINOPHOSPHOLIPID; AMPICILLIN; BACTERIAL DNA; CARBENICILLIN; CARDIOLIPIN; CEFALEXIN; CEFAZOLIN; CHLORAMPHENICOL; ERYTHROMYCIN; FATTY ACID; GENTAMICIN; KANAMYCIN; LINCOMYCIN; NALIDIXIC ACID; NEOMYCIN; OFLOXACIN; OLEANDOMYCIN; OXACILLIN; PENICILLIN G; PHOSPHATIDYLETHANOLAMINE; PHOSPHATIDYLGLYCEROL; PHOSPHOLIPID; POLYMYXIN; RIFAMPICIN; RNA 16S; STREPTOMYCIN; TETRACYCLINE; UBIQUINONE DERIVATIVE; VANCOMYCIN;

AEROBIC BACTERIUM; ANTIBIOTIC SENSITIVITY; ARENICELLA XANTHA; ARTICLE; BACTERIAL STRAIN; BACTERIUM CULTURE; BACTERIUM ISOLATE; BACTERIUM ISOLATION; CULTURE MEDIUM; GAMMAPROTEOBACTERIA; GENE SEQUENCE; GRAM NEGATIVE BACTERIUM; JAPAN; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PHYLOGENY; PRIORITY JOURNAL; RNA GENE; SEASHORE; SEDIMENT; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY;

DNA, BACTERIAL; DNA, RIBOSOMAL; FATTY ACIDS; GAMMAPROTEOBACTERIA; GEOLOGIC SEDIMENTS; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, RIBOSOMAL, 16S;

ALCANIVORAX; BACTERIA (MICROORGANISMS); GAMMAPROTEOBACTERIA; KANGIELLA; MICROBULBIFER; NEGIBACTERIA; NITRINCOLA LACISAPONENSIS;

EID: 77955593961     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.017194-0     Document Type: Article

References (23)

1. Baumann, P. & Baumann, L. (1981). The marine Gram-negative eubacteria: genera Photobacterium, Beneckea, Alteromonas, Pseudomonas and Alcaligenes. In The Prokaryotes, vol. 1, pp. 1302- 1330. Edited by M. P. Starr, H. Stolp, H. G. Trüper, A. Balows & H. Schlegel. Berlin: Springer.
2. Bligh, E. G. & Dyer, W. J. (1959). A rapid method of total lipid extraction and purification. Can J Biochem Physiol 37, 911-917.
3. Dimitriu, P. A., Shukla, S. K., Conradt, J., Márquez, M. C., Ventosa, A., Maglia, A., Peyton, B. M., Pinkart, H. C. & Mormile, M. R. (2005). Nitrincola lacisaponensis gen. nov., sp. nov., a novel alkaliphilic bacterium isolated from an alkaline, saline lake. Int J Syst Evol Microbiol 55, 2273-2278.
4. T (Bruns and Berthe-Corti 1999) as Alcanivorax jadensis comb. nov., members of the emended genus Alcanivorax. Int J Syst Evol Microbiol 53, 331-338.
5. Gerhardt, P., Murray, R. G. E., Wood, W. A. & Krieg, N. R. (editors) (1994). Methods for General and Molecular Bacteriology. Washington, DC: American Society for Microbiology.
6. González, J. M., Mayer, F., Moran, A., Hodson, R. E. & Whitman, W. B. (1997). Microbulbifer hydrolyticus gen. nov., sp. nov., and Marinobacterium georgiense gen. nov., sp. nov., two marine bacteria from a lignin-rich pulp mill waste enrichment community. Int J Syst Bacteriol 47, 369-376.
7. Graeber, I., Kaesler, I., Borchert, M. S., Dieckmann, R., Pape, T., Lurz, R., Nielsen, P., Von Döhren, H., Michaelis, W. & Szewzyk, U. (2008). Spongiibacter marinus gen. nov., sp. nov., a halophilic marine bacterium isolated from the boreal sponge Haliclona sp. 1. Int J Syst Evol Microbiol 58, 585-590.
8. Leifson, E. (1963). Determination of carbohydrate metabolism of marine bacteria. J Bacteriol 85, 1183-1184.
9. Marmur, J. & Doty, P. (1962). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5, 109-118.
10. Owen, R. J., Hill, L. R. & Lapage, S. P. (1969). Determination of DNA base composition from melting profiles in dilute buffers. Biopolymers 7, 503-516.
11. Pearson, W. R. & Lipman, D. J. (1988). Improved tools for biological sequence comparison. Proc Natl Acad Sci U S A 85, 2444-2448.
12. Romanenko, L. A., Schumann, P., Zhukova, N. V., Rohde, M., Mikhailov, V. V. & Stackebrandt, E. (2003). Oceanisphaera litoralis gen. nov., sp. nov., a novel halophilic bacterium from marine bottom sediments. Int J Syst Evol Microbiol 53, 1885-1888.
13. Romanenko, L. A., Schumann, P., Rohde, M., Mikhailov, V. V. & Stackebrandt, E. (2004). Reinekea marinisedimentorum gen. nov., sp. nov., a novel gammaproteobacterium from marine coastal sediments. Int J Syst Evol Microbiol 54, 669-673.
14. Romanenko, L. A., Uchino, M., Falsen, E., Frolova, G. M., Zhukova, N. V. & Mikhailov, V. V. (2005). Pseudomonas pachastrellae sp. nov. isolated from a marine sponge. Int J Syst Evol Microbiol 55, 919-924.
15. Shida, O., Takagi, H., Kadowaki, K., Nakamura, L. K. & Komagata, K. (1997). Transfer of Bacillus alginolyticus, Bacillus chondroitinus, Bacillus curdlanolyticus, Bacillus glucanolyticus, Bacillus kobensis, and Bacillus thiaminolyticus to the genus Paenibacillus and emended description of the genus Paenibacillus. Int J Syst Bacteriol 47, 289-298.
16. Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
17. Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA 4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
18. Tang, S.-K., Wang, Y., Cai, M., Lou, K., Mao, P. H., Jin, X., Jiang, C.-L., Xu, L.-H. & Li, W.-J. (2008). Microbulbifer halophilus sp. nov., a moderately halophilic bacterium from north-west China. Int J Syst Evol Microbiol 58, 2036-2040.
19. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
20. Vaskovsky, V. E. & Terekhova, T. A. (1979). HPTLC of phospholipid mixtures containing phosphatidylglycerol. J High Resolut Chromatogr 2, 671-672.
21. Yakimov, M. M., Golyshin, P. N., Lang, S., Moore, E. R. B., Abraham, W.-R., Lünsdorf, H. & Timmis, K. N. (1998). Alcanivorax borkumensis gen. nov., sp. nov., a new, hydrocarbon-degrading and surfactant-producing marine bacterium. Int J Syst Bacteriol 48, 339-348.
22. Yoon, J.-H., Kim, I.-G., Oh, T.-K. & Park, Y.-H. (2004a). Microbulbifer maritimus sp. nov., isolated from an intertidal sediment from the Yellow Sea, Korea. Int J Syst Evol Microbiol 54, 1111-1116.
23. Yoon, J.-H., Oh, T.-K. & Park, Y.-H. (2004b). Kangiella koreensis gen. nov., sp. nov. and Kangiella aquimarina sp. nov., isolated from a tidal flat of the Yellow Sea in Korea. Int J Syst Evol Microbiol 54, 1829-1835.