An investigation into fragmentation of hEGF in triple quadrupole mass spectrometry and its quantitative application to human plasma

International Journal of Mass Spectrometry

Volumn 295, Issue 1-2, 2010, Pages 7-12

  Chen, Yun ^a   Qiao, Shanlei ^a   Wang, Xianlong ^b   Liu, Yuan ^c  

^a NANJING MEDICAL UNIVERSITY   (China)

^b UNIVERSITY OF ELECTRONIC SCIENCE AND TECHNOLOGY OF CHINA   (China)

^c THE FIRST AFFILIATED HOSPITAL OF NANJING MEDICAL UNIVERSITY   (China)

Author keywords

Human epidermal growth factor (hEGF); Immonium ion; Intra chain disulfide bond; Polypeptide; Quantum chemical calculation; Triple quadrupole mass spectrometer

Indexed keywords

EID: 77955562809     PISSN: 13873806     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ijms.2010.06.010     Document Type: Article

References (41)

1. Tamvakopoulos C. Mass Spectrom. Rev. 2007, 26:389-402.
2. Bondar O.P., Barnidge D.R., Klee E.W., Davis B.J., Klee G.G. Clin. Chem. 2007, 53:673-678.
3. Hortin G.L. Clin. Chem. 2007, 53:543-544.
4. Shipkova P., Drexler D.M., Langish R., Smalley J., Salyan M.E., Sanders M. Rapid Commun. Mass Spectrom. 2008, 22:1359-1366.
5. Murao N., Ishigai M., Yasuno H., Shimonaka Y., Aso Y. Rapid Commun. Mass Spectrom. 2007, 21:4033-4038.
6. Matrix Science Ltd., Available from: , 2007 (accessed 16.04.10). http://www.matrixscience.com/help/fragmentation_help.html.
7. Hohmann L.J., Eng J.K., Gemmill A., Klimek J., Vitek O., Reid G.E., Martin D.B. Anal. Chem. 2008, 80:5596-5606.
8. Pereira A.S., DiLeone L., Souza F.H., Lilla S., Richter M., Schwartsmann G., De Nucci G. J. Chromatogr. B Anal. Technol. Biomed. Life Sci. 2005, 816:321-326.
9. Salek M., Lehmann W.D. Proteomics 2005, 5:351-353.
10. Chen Y., Qiao S., Wang C. Int. J. Mass Spectrom. 2009, 288:68-74.
11. Son K., Kwon C. Pharm. Res. 1995, 12:451-454.
12. Stoscheck C.M., King L.E. Cancer Res. 1986, 46:1030-1037.
13. Gorgoulis V., Aninos D., Mikou P., Kanavaros P., Karameris A., Joardanoglou J., Rasidakis A., Veslemes M., Ozanne B., Spandidos D.A. Anticancer Res. 1992, 12:1183-1187.
14. Berlanga-Acosta J., Gavilondo-Cowley J., Lopez-Saura P., Gonzalez-Lopez T., Castro-Santana M.D., Lopez-Mola E., Guillen-Nieto G., Herrera-Martinez L. Int. Wound J. 2009, 6:331-346.
15. Tuyet H.L., Nguyen Quynh T.T., Vo Hoang Minh H., Thi Bich D.N., Do Dinh T., Le Tan D., Van H.L., Le Huy T., Doan Huu H., Tran Trong T.N. Int. Wound J. 2009, 6:159-166.
16. Falanga V., Eaglstein W.H., Bucalo B., Katz M.H., Harris B., Carson P. J. Dermatol. Surg. Oncol. 1992, 18:604-606.
17. McCormack A.L., Somogyi A., Dongre A.R., Wysocki V.H. Anal. Chem. 1993, 65:2859-2872.
18. Alonso-Salces R.M., Guillou C., Berrueta L.A. Rapid Commun. Mass Spectrom. 2009, 23:363-383.
19. Shimadzu Corporation, Available from: , 2009 (accessed 16.04.10). http://www.shimadzu.com/products/lab/ms/glossary/oh80jt00000009k1.html.
20. Kinter M., Sherman N.E. Protein Sequencing and Identification Using Tandem Mass Spectrometry 2000, John Wiley and Sons.
21. March R.E., Li H., Belgacemb O., Papanastasiou D. Int. J. Mass Spectrom. 2007, 262:51-66.
22. Rafferty T.L., Gallagher R.T., Derrick P.J., Heck J.R., Duncan A., Robins S.P. Int. J. Mass Spectrom. 1996, 160:377-386.
23. Protein Data Bank, Available from: , 2010 (accessed 11.05.10). http://www.rcsb.org/pdb/explore/explore.do?structureId=1JL9.
24. Becke A.D. J. Chem. Phys. 1993, 98:5648-5652.
25. Frisch M.J., Pople J.A., Binkley J.S. J. Chem. Phys. 1984, 80:3265.
26. M.J. Frisch, G.W. Trucks, H.B. Schlegel, G.E. Scuseria, M.A. Robb, J.R. Cheeseman, J.J.A. Montgomery, T. Vreven, K.N. Kudin, J.C. Burant, J.M. Millam, S.S. Iyengar, J. Tomasi, V. Barone, B. Mennucci, M. Cossi, G. Scalmani, N. Rega, G.A. Petersson, H. Nakatsuji, M. Hada, M. Ehara, K. Toyota, R. Fukuda, J. Hasegawa, M. Ishida, T. Nakajima, Y. Honda, O. Kitao, H. Nakai, M. Klene, X. Li, J.E. Knox, H.P. Hratchian, J.B. Cross, V. Bakken, C. Adamo, J. Jaramillo, R. Gomperts, R.E. Stratmann, O. Yazyev, A.J. Austin, R. Cammi, C. Pomelli, J.W. Ochterski, P.Y. Ayala, K. Morokuma, G.A. Voth, P. Salvador, J.J. Dannenberg, V.G. Zakrzewski, S. Dapprich, A.D. Daniels, M.C. Strain, O. Farkas, D.K. Malick, A.D. Rabuck, K. Raghavachari, J.B. Foresman, J.V. Ortiz, Q. Cui, A.G. Baboul, S. Clifford, J. Cioslowski, B.B. Stefanov, G. Liu, A. Liashenko, P. Piskorz, I. Komaromi, R.L. Martin, D.J. Fox, T. Keith, M.A. Al-Laham, C.Y. Peng, A. Nanayakkara, M. Challacombe, P.M.W. Gill, B. Johnson, W. Chen, M.W. Wong, C. Gonzalez, J.A. Pople, Gaussian, Inc., Wallingford, CT, 2004.
27. Iavarone A.T., Jurchen J.C., Williams E.R. J. Am. Soc. Mass Spectrom. 2000, 11:976-985.
28. Wang G., Cole R.B. Anal. Chem. 1994, 66:3702-3708.
29. Schronk L.R., Cotter R.J. Biol. Mass Spectrom. 1986, 13:395-400.
30. Papayannopoulos I.A. Mass Spectrom. Rev. 1995, 14:49-73.
31. Loo J.A., Edmonds C.G., Smith R.D. Anal. Chem. 1993, 65:425-438.
32. Grewal R.N., Aribi H.E., Harrison A.G., Siu K.W., Hopkinson A.C. J. Phys. Chem. B 2004.
33. Trelle M.B., Jensen O.N. Anal. Chem. 2008, 80:3422-3430.
34. Kaminskii A.Y., Efremov Y.A., Kotlyar S.A., Gorodnyuk V.P. Russ. J. Gen. Chem. 1996, 66:266-269.
35. Bredehoft M., Schanzer W., Thevis M. Rapid Commun. Mass Spectrom. 2008, 22:477-485.
36. Olsson A.O., Nguyen J.V., Sadowski M.A., Barr D.B. Anal. Bioanal. Chem. 2003, 376:808-815.
37. Daniel Y.A., Turner C., Haynes R.M., Hunt B.J., Dalton R.N. Br. J. Haematol. 2005, 130:635-643.
38. Navarro M.A., Mesia R., Diez-Gibert O., Rueda A., Ojeda B., Alonso M.C. Breast Cancer Res. Treat. 1997, 42:83-86.
39. Snow N.H. J. Chromatogr. A 2000, 885:445-455.
40. Li M., Alnouti Y., Leverence R., Bi H., Gusev A.I. J. Chromatogr. B Anal. Technol. Biomed. Life Sci. 2005, 825:152-160.
41. Hoofnagle A.N., Becker J.O., Wener M.H., Heinecke J.W. Clin. Chem. 2008, 54:1796-1804.