Lipidome profiling of Saccharomyces cerevisiae reveals pitching rate-dependent fermentative performance

Applied Microbiology and Biotechnology

Volumn 87, Issue 4, 2010, Pages 1507-1516

  Tian, Hong Chi ^a   Zhou, Jian ^a   Qiao, Bin ^a   Liu, Ying ^a   Xia, Jin Mei ^a   Yuan, Ying Jin ^a  

^a TIANJIN UNIVERSITY   (China)

Author keywords

Cell density; Fermentation; Phospholipids; Saccharomyces cerevisiae; Sterols

Indexed keywords

BIO-ETHANOL PRODUCTION; CELL DENSITY; FATTY ACYL CHAINS; HIGH CELL DENSITY; HIGH DENSITY; LIPID PROFILE; LIPIDOMES; MOLECULAR BASIS; PHOSPHATIDYLGLYCEROLS; PHOSPHATIDYLINOSITOL; PHOSPHATIDYLSERINE; SACCHAROMYCES CEREVISIAE; TIME OF FLIGHT MASS SPECTROMETRY; YEAST CELL;

BIOETHANOL; ETHANOL; FERMENTATION; GAS CHROMATOGRAPHY; MASS SPECTROMETRY; PHOSPHOLIPIDS; PRINCIPAL COMPONENT ANALYSIS;

YEAST;

LIPIDOME; PHOSPHATIDYLGLYCEROL; PHOSPHOLIPID; STEROL;

BACTERIUM; ETHANOL; FERMENTATION; GAS CHROMATOGRAPHY; LIPID; MASS SPECTROMETRY; PRINCIPAL COMPONENT ANALYSIS; STEROL; YEAST;

ALCOHOL PRODUCTION; ARTICLE; CELL DENSITY; CELL GROWTH; ELECTROSPRAY MASS SPECTROMETRY; FERMENTATION TECHNIQUE; GAS CHROMATOGRAPHY; LIPID COMPOSITION; NONHUMAN; PROTEIN ANALYSIS; SACCHAROMYCES CEREVISIAE; TIME OF FLIGHT MASS SPECTROMETRY; CHEMISTRY; FERMENTATION; METABOLISM;

FERMENTATION; PHOSPHOLIPIDS; SACCHAROMYCES CEREVISIAE; STEROLS;

SACCHAROMYCES CEREVISIAE;

EID: 77955554901     PISSN: 01757598     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00253-010-2615-2     Document Type: Article

References (39)

1. GW Becker RL Lester 1977 Changes in phospholipids of Saccharomyces cerevisiae associated with inositol-less death J Biol Chem 252 8684 8691 1:CAS:528:DyaE2sXlvFOjsL8%3D
2. L Beney P Gervais 2001 Influence of the fluidity of the membrane on the response of microorganisms to environmental stresses Appl Microbiol Biotechnol 57 34 42 10.1007/s002530100754 1:CAS:528:DC%2BD3MXotVSnurg%3D (Pubitemid 32938349)
3. A Blomberg L Adler 1992 Physiology of osmotolerance in fungi Adv Microb Physiol 33 145 212 10.1016/S0065-2911(08)60217-9 1:CAS:528:DyaK3sXhs1CktL8%3D
4. GM Carman SA Henry 1999 Phospholipid biosynthesis in the yeast Saccharomyces cerevisiae and interrelationship with other metabolic processes Prog Lipid Res 38 361 399 10.1016/S0163-7827(99)00010-7 1:CAS:528: DC%2BD3cXjslKmsg%3D%3D
5. MA Casadei P Manas G Niven E Needs BM Mackey 2002 Role of membrane fluidity in pressure resistance of Escherichia coli NCTC 8164 Appl Environ Microbiol 68 5965 5972 10.1128/AEM.68.12.5965-5972.2002 1:CAS:528: DC%2BD38Xptlartr8%3D (Pubitemid 36342429)
6. JS Cheng MZ Ding HC Tian YJ Yuan 2009 Inoculation-density-dependent responses and pathway shifts in Saccharomyces cerevisiae Proteomics 9 4704 4713 10.1002/pmic.200900249 1:CAS:528:DC%2BD1MXht1Ort7rJ
7. G Daum ND Lees M Bard R Dickson 1998 Biochemistry, cell biology and molecular biology of lipids of Saccharomyces cerevisiae Yeast 14 1471 1510 10.1002/(SICI)1097-0061(199812)14:16<1471::AID-YEA353>3.0.CO;2-Y 1:CAS:528:DyaK1MXlslOnsQ%3D%3D (Pubitemid 29015365)
8. P Delmas B Coste N Gamper MS Shapiro 2005 Phosphoinositide lipid second messengers: new paradigms for calcium channel modulation Neuron 47 179 182 10.1016/j.neuron.2005.07.001 1:CAS:528:DC%2BD2MXntVSmsbw%3D (Pubitemid 41019249)
9. M-Z Ding H-C Tian J-S Cheng Y-J Yuan 2009 Inoculum size-dependent interactive regulation of metabolism and stress response of Saccharomyces cerevisiae revealed by comparative metabolomics J Biotechnol 144 279 286 10.1016/j.jbiotec.2009.09.020 1:CAS:528:DC%2BD1MXhsV2htbfK
10. CS Ejsing JL Sampaio V Surendranath E Duchoslav K Ekroos RW Klemm K Simons A Shevchenko 2009 Global analysis of the yeast lipidome by quantitative shotgun mass spectrometry P Natl Acad Sci U S A 106 2136 2141 10.1073/pnas.0811700106 1:CAS:528:DC%2BD1MXitlaqtr4%3D
11. JS Fang MJ Barcelona 1998 Structural determination and quantitative analysis of bacterial phospholipids using liquid chromatography electrospray ionization mass spectrometry J Microbiol Meth 33 23 35 10.1016/S0167-7012(98) 00037-2 1:CAS:528:DyaK1cXktFKmsrk%3D (Pubitemid 28288950)
12. AE Farrell RJ Plevin BT Turner AD Jones M O'Hare DM Kammen 2006 Ethanol can contribute to energy and environmental goals Science 311 506 508 10.1126/science.1121416 1:CAS:528:DC%2BD28XmvVynuw%3D%3D (Pubitemid 43157725)
13. P Gambert C Lallemant A Archambault BF Maume P Padieu 1979 Assessment of serum-cholesterol by 2 methods-gas-liquid-chromatography on a capillary column and chemical ionization-mass fragmentography with isotopic dilution of [3, 4-c-13] cholesterol as internal standard J Chromatogr 162 1 6 10.1016/S0378-4347(00)82057-5 1:CAS:528:DyaE1MXltVyjtg%3D%3D
14. ML Greenberg S Hubbell C Lam 1988 Inositol regulates phosphatidylglycerolphosphate synthase expression in Saccharomyces cerevisiae Mol Cell Biol 8 4773 4779 1:CAS:528:DyaL1MXitVyqtA%3D%3D
15. PP Han YJ Yuan 2009 Lipidomic analysis reveals activation of phospholipid signaling in mechanotransduction of taxus cuspidata cells in response to shear stress FASEB J 23 623 630 10.1096/fj.08-119362 1:CAS:528:DC%2BD1MXhs1Klsr0%3D
16. J Hill E Nelson D Tilman S Polasky D Tiffany 2006 Environmental, economic, and energetic costs and benefits of biodiesel and ethanol biofuels Proc Natl Acad Sci U S A 103 11206 11210 10.1073/pnas.0604600103 1:CAS:528:DC%2BD28XnvValsb0%3D (Pubitemid 44156497)
17. R Homan HJ Pownall 1988 Transbilayer diffusion of phospholipids- dependence on headgroup structure and acyl chain-length Biochim Biophys Acta 938 155 166 10.1016/0005-2736(88)90155-1 1:CAS:528:DyaL1cXhvVanurk%3D
18. CH Huang 2001 Mixed-chain phospholipids: structures and chain-melting behavior Lipids 36 1077 1097 10.1007/s11745-001-0818-1 1:CAS:528: DC%2BD3MXptVGntbY%3D
19. MJ Kelley AM Bailis SA Henry GM Carman 1988 Regulation of phospholipid biosynthesis in Saccharomyces cerevisiae by inositol-inositol is an inhibitor of phosphatidylserine synthase activity J Biol Chem 263 18078 18085 1:CAS:528:DyaL1cXlvVOjsbg%3D
20. AG Lee 2003 Lipid-protein interactions in biological membranes: a structural perspective Biochim Biophys Acta Biomembr 1612 1 40 10.1016/S0005-2736(03)00056-7 1:CAS:528:DC%2BD3sXjtlWkt78%3D (Pubitemid 36555684)
21. BA Lewis DM Engelman 1983 Lipid bilayer thickness varies linearly with acyl chain-length in fluid phosphatidylcholine vesicles J Mol Biol 166 211 217 10.1016/S0022-2836(83)80007-2 1:CAS:528:DyaL3sXktlCkurc%3D
22. CM Matsko OC Hunter H Rabinowich MT Lotze AA Amoscato 2001 Mitochondrial lipid alterations during fas- and radiation-induced apoptosis Biochem Biophys Res Commun 287 1112 1120 10.1006/bbrc.2001.5696 1:CAS:528:DC%2BD3MXnt1Oktrw%3D (Pubitemid 32980567)
23. SA Minskoff ML Greenberg 1997 Phosphatidylglycerophosphate synthase from yeast Biochim Biophys Acta 1348 187 191 1:CAS:528:DyaK2sXmtFKhurw%3D
24. E Nevoigt U Stahl 1997 Osmoregulation and glycerol metabolism in the yeast Saccharomyces cerevisiae FEMS Microbiol Rev 21 231 241 10.1111/j.1574-6976.1997.tb00352.x 1:CAS:528:DyaK2sXnvFGkt7c%3D
25. P Nissen D Nielsen N Arneborg 2003 Viable Saccharomyces cerevisiae cells at high concentrations cause early growth arrest of non-Saccharomyces yeasts in mixed cultures by a cell-cell contact-mediated mechanism Yeast 20 331 341 10.1002/yea.965 1:CAS:528:DC%2BD3sXit1Wgtb4%3D (Pubitemid 36335922)
26. S Paula AG Volkov AN VanHoek TH Haines DW Deamer 1996 Permeation of protons, potassium ions, and small polar molecules through phospholipid bilayers as a function of membrane thickness Biophys J 70 339 348 10.1016/S0006-3495(96) 79575-9 1:CAS:528:DyaK28XjslGksQ%3D%3D
27. 12 fatty acid desaturase gene by heterologous expression in Saccharomyces cerevisiae Arch Biochem Biophys 376 399 408 10.1006/abbi.2000.1733 1:CAS:528:DC%2BD3cXisF2jtLo%3D (Pubitemid 30210889)
28. Sluiter A, Hames B, Ruiz R, Scarlata C, Sluiter J, Templeton D (2006) Determination of sugars, byproducts, and degradation products in liquid fraction process samples. National Renewable Energy Laboratory, Golden, CO
29. TM Swan K Watson 1998 Stress tolerance in a yeast sterol auxotroph: role of ergosterol, heat shock proteins and trehalose FEMS Microbiol Lett 169 191 197 10.1111/j.1574-6968.1998.tb13317.x 1:CAS:528:DyaK1cXnslOrtLc%3D
30. JE Vance 2008 Phosphatidylserine and phosphatidylethanolamine in mammalian cells: two metabolically related aminophospholipids J Lipid Res 49 1377 1387 10.1194/jlr.R700020-JLR200 1:CAS:528:DC%2BD1cXotVOqur4%3D
31. PJ Verbelen S Van Mulders D Saison S Van Laere F Delvaux FR Delvaux 2008 Characteristics of high cell density fermentations with different lager yeast strains J Inst Brew 114 127 133
32. PJ Verbelen TML Dekoninck SMG Saerens SE Van Mulders JM Thevelein FR Delvaux 2009 Impact of pitching rate on yeast fermentation performance and beer flavour Appl Microbiol Biotechnol 82 155 167 10.1007/s00253-008-1779-5 1:CAS:528:DC%2BD1MXntVOlsQ%3D%3D
33. GQ Wang SS Li HN Lin C Huang 1997 Influence of cis double bonds in the sn-2 acyl chain of phosphatidylethanolamine on the gel-to-liquid crystalline phase transition Biophys J 73 283 292 10.1016/S0006-3495(97)78069-X 1:CAS:528:DyaK2sXktlaktrs%3D (Pubitemid 27274126)
34. ZX Wang J Zhuge HY Fang BA Prior 2001 Glycerol production by microbial fermentation: a review Biotechnol Adv 19 201 223 10.1016/S0734-9750(01)00060-X 1:CAS:528:DC%2BD3MXlt1Smsb0%3D (Pubitemid 32692995)
35. AE Wheals LC Basso DMG Alves HV Amorim 1999 Fuel ethanol after 25 years Trends Biotechnol 17 482 487 10.1016/S0167-7799(99)01384-0 1:CAS:528: DyaK1MXntlegtLY%3D (Pubitemid 29525595)
36. JM Xia YJ Yuan 2009 Comparative lipidomics of four strains of Saccharomyces cerevisiae reveals different responses to furfural, phenol, and acetic acid J Agric Food Chem 57 99 108 10.1021/jf802720t 1:CAS:528: DC%2BD1cXhsVCrurbK
37. S Yang B Qiao SH Lu YJ Yuan 2007 Comparative lipidomics analysis of cellular development and apoptosis in two Taxus cell lines Biochim Biophys Acta -Mol Cell Biol Lipids 1771 600 612 1:CAS:528:DC%2BD2sXkvFGqurg%3D
38. 4+) Biochim Biophys Acta -Mol Cell Biol Lipids 1781 123 134 1:CAS:528:DC%2BD1cXivVyjtLk%3D
39. A Yu CR McMaster DM Byers ND Ridgway HW Cook 2003 Stimulation of phosphatidylserine biosynthesis and facilitation of UV-induced apoptosis in chinese hamster ovary cells overexpressing phospholipid scramblase 1 J Biol Chem 278 9706 9714 10.1074/jbc.M204614200 1:CAS:528:DC%2BD3sXhvV2iurg%3D (Pubitemid 36800468)