Extracting protein interactions from text with the unified AkaneRE event extraction system

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Volumn 7, Issue 3, 2010, Pages 442-453

  Stre, Rune ^a   Yoshida, Kazuhiro ^a   Miwa, Makoto ^a   Matsuzaki, Takuya ^a   Kano, Yoshinobu ^a   Tsujii, Jun'Ichi ^a,b  

^a UNIVERSITY OF TOKYO   (Japan)

^b UNIVERSITY OF MANCHESTER   (United Kingdom)

Author keywords

bioinformatics (genome or protein) databases; language parsing and understanding; machine learning; Text mining

Indexed keywords

BIOINFORMATICS (GENOME OR PROTEIN) DATABASE; BIOLOGICAL INFORMATION; CONFIDENCE SCORE; CONFIGURATION LANGUAGES; CORE ENGINES; EVENT EXTRACTION; LANGUAGE PARSING AND UNDERSTANDING; MACHINE-LEARNING; NAMED ENTITY RECOGNITION; ON-MACHINES; PART OF SPEECH TAGGING; PROTEIN INTERACTION; PROTEIN-PROTEIN INTERACTIONS; RELATION EXTRACTION; RESEARCH EFFORTS; SENTENCE BOUNDARY DETECTION; STATISTICAL CLASSIFIER; TOKENIZATION; TRAINING DATA; UNIFIED SYSTEM;

BIOINFORMATICS; GENES; LEARNING SYSTEMS; LINGUISTICS; NATURAL LANGUAGE PROCESSING SYSTEMS; PROTEINS; SPEECH RECOGNITION; SPEECH TRANSMISSION; TEXT PROCESSING;

DATA MINING;

ALGORITHM; ARTICLE; BIOLOGY; DATA MINING; GENETIC DATABASE; INFORMATION RETRIEVAL; METHODOLOGY; NATURAL LANGUAGE PROCESSING; PROTEIN ANALYSIS;

ALGORITHMS; COMPUTATIONAL BIOLOGY; DATA MINING; DATABASES, GENETIC; INFORMATION STORAGE AND RETRIEVAL; NATURAL LANGUAGE PROCESSING; PROTEIN INTERACTION MAPPING;

EID: 77955465839     PISSN: 15455963     EISSN: None     Source Type: Journal    
DOI: 10.1109/TCBB.2010.46     Document Type: Article

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