Identification of the feline humoral immune response to Bartonella henselae infection by protein microarray

PLoS ONE

Volumn 5, Issue 7, 2010, Pages

  Vigil, Adam ^a   Ortega, Rocio ^a   Jain, Aarti ^a   Nakajima Sasaki, Rie ^a   Tan, Xiaolin ^a   Chomel, Bruno B ^b   Kasten, Rickie W ^b   Koehler, Jane E ^c   Felgner, Philip L ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MEMBRANE PROTEIN;

ALGORITHM; AMINO ACID METABOLISM; AMINO ACID TRANSPORT; ANTIGEN EXPRESSION; ARTICLE; CAT SCRATCH DISEASE; CELLULAR DISTRIBUTION; CONTROLLED STUDY; GENETIC ASSOCIATION; GENOMICS; HIGH THROUGHPUT SCREENING; HOST PATHOGEN INTERACTION; HUMORAL IMMUNITY; NONHUMAN; OPEN READING FRAME; PROTEIN EXPRESSION; PROTEIN FUNCTION; PROTEIN LOCALIZATION; PROTEIN MICROARRAY; ANIMAL; BARTONELLA HENSELAE; BARTONELLOSIS; CAT; GENETICS; HEMANGIOMATOSIS; IMMUNOLOGY; METABOLISM; METHODOLOGY; MICROBIOLOGY; PATHOGENICITY; PHYSIOLOGY; POLYMERASE CHAIN REACTION;

ANIMALIA; BACTERIA (MICROORGANISMS); BARTONELLA HENSELAE; FELIDAE; PROTEOBACTERIA;

ANGIOMATOSIS, BACILLARY; ANIMALS; BARTONELLA HENSELAE; BARTONELLA INFECTIONS; CATS; IMMUNITY, HUMORAL; OPEN READING FRAMES; POLYMERASE CHAIN REACTION; PROTEIN ARRAY ANALYSIS;

EID: 77955393671     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0011447     Document Type: Article

References (37)

1. Chomel BB, Boulouis HJ, Maruyama S, Breitschwerdt EB (2006) Bartonella spp. in pets and effect on human health. Emerg Infect Dis 12: 389-394.
2. Jameson P, Greene C, Regnery R, Dryden M, Marks A, et al. (1995) Prevalence of Bartonella henselae antibodies in pet cats throughout regions of North America. J Infect Dis 172: 1145-1149.
3. Regnery RL, RooneyJA, Johnson AM, Nesby SL, Manzewitsch P, et al. (1996) Experimentally induced Bartonella henselae infections followed by challenge exposure and antimicrobial therapy in cats. AmJ Vet Res 57: 1714-1719.
4. Marano N, Rupprecht C, Regnery R (2007) Vaccines for emerging infections. Rev Sci Tech 26: 203-215.
5. Chang CC, Chomel BB, Kasten RW, Tappero JW, Sanchez MA, et al. (2002) Molecular epidemiology of Bartonella henselae infection in human immunodeficiency virus-infected patients and their cat contacts, using pulsed-field gel electrophoresis and genotyping. J Infect Dis 186: 1733-1739.
6. Davies DH, Liang X, Hernandez JE, Randall A, Hirst S, et al. (2005) Profiling the humoral immune response to infection by using proteome microarrays: High-throughput vaccine and diagnostic antigen discovery. Proc Natl Acad Sci U S A 102: 547-552.
7. Davies DH, Molina DM, Wrammert J, Miller J, Hirst S, et al. (2007) Proteome- wide analysis ofthe serological response to vaccinia and smallpox. Proteomics 7:1678-1686.
8. Barbour AG, Jasinskas A, Kayala MA, Davies DH, Steere AC, et al. (2008) A genome-wide proteome array reveals a limited set of immunogens in natural infections of humans and white-footed mice with Borrelia burgdorferi. Infect Immun 76: 3374-3389.
9. Doolan DL, Mu Y, Unal B, Sundaresh S, Hirst S, et al. (2008) Profiling humoral immune responses to P. falciparum infection with protein microarrays. Proteomics 8: 4680-4694.
10. Eyles JE, Unal B, Hartley MG, Newstead SL, Flick-Smith H, et al. (2007) Immunodominant Francisella tularensis antigens identified using proteome microarray. Crown Copyright 2007 Dstl. Proteomics 7: 2172-2183.
11. Vigil A, Davies DH, Felgner PL (2010) Defining the humoral immune response to infectious agents using high-density protein microarrays. Future Microbiol 5: 241-251.
12. Davies DH, Wyatt LS, Newman FK, Earl PL, Chun S, et al. (2008) Antibody profiling by proteome microarray reveals the immunogenicity of the attenuated smallpox vaccine modified vaccinia virus ankara is comparable to that of Dryvax. J Virol 82: 652-663.
13. Sette A, Moutaftsi M, Moyron-Quiroz J, McCausland MM, Davies DH, et al. (2008) Selective CD4+ T cell help for antibody responses to a large viral pathogen: deterministic linkage of specificities. Immunity 28: 847-858.
14. Benhnia MR, McCausland MM, Su HP, Singh K, Hoffmann J, et al. (2008) Redundancy and plasticity of neutralizing antibody responses are cornerstone attributes of the human immune response to the smallpox vaccine. J Virol 82: 3751-3768.
15. Felgner PL, Kayala MA, Vigil A, Burk C, Nakajima-Sasaki R, et al. (2009) A Burkholderia pseudomallei protein microarray reveals serodiagnostic and cross-reactive antigens. Proc Natl Acad Sci U S A.
16. Chomel BB, Abbott RC, Kasten RW, Floyd-Hawkins KA, Kass PH, et al. (1995) Bartonella henselae prevalence in domestic cats in California: risk factors and association between bacteremia and antibody titers. J Clin Microbiol 33: 2445-2450.
17. Alsmark CM, Frank AC, Karlberg EO, Legault BA, Ardell DH, et al. (2004) The louse-borne human pathogen Bartonella quintana is a genomic derivative of the zoonotic agent Bartonella henselae. Proc Natl Acad Sci U S A 101: 9716-9721.
18. Abramoff MD, Magelhaes PJ, Ram SJ(2004) Image Processing with ImageJ. Biophotonics International 11: 36-42.
19. Pamelard F, Even G, Apostol C, Preda C, Dhaenens C, et al. (2009) PASE: a web-based platform for peptide/protein microarray experiments. Methods Mol Biol 570: 413-30.
20. Taylor CF, Paton NW, Lilley KS, Binz PA, Julian RK, Jr., et al. (2007) The minimum information about a proteomics experiment (MIAPE). Nat Biotechnol 25: 887-893.
21. Felgner PL, Kayala MA, Vigil A, Burk C, Nakajima-Sasaki R, et al. (2009) A Burkholderia pseudomallei protein microarray reveals serodiagnostic and cross-reactive antigens. Proc Natl Acad Sci U S A 106: 13499-13504.
22. Kreil DP, Karp NA, Lilley KS (2004) DNA microarray normalization methods can remove bias from differential protein expression analysis of2D difference gel electrophoresis results. Bioinformatics 20: 2026-2034.
23. Long AD, Mangalam HJ, Chan BY, Tolleri L, Hatfield GW, et al. (2001) Improved statistical inference from DNA microarray data using analysis of variance and a Bayesian statistical framework. Analysis ofglobal gene expression in Escherichia coli K12. J Biol Chem 276: 19937-19944.
24. Baldi P, Long AD (2001) A Bayesian framework for the analysis of microarray expression data: regularized t -test and statistical inferences of gene changes. Bioinformatics 17: 509-519.
25. Sundaresh S, Doolan DL, Hirst S, Mu Y, Unal B, et al. (2006) Identification of humoral immune responses in protein microarrays using DNA microarray data analysis techniques. Bioinformatics 22: 1760-1766.
26. Sundaresh S, Randall A, Unal B, Petersen JM, Belisle JT, et al. (2007) From protein microarrays to diagnostic antigen discovery: a study of the pathogen Francisella tularensis. Bioinformatics 23: i508-i518.
27. Hochberg Y, Benjamini Y (1990) More powerful procedures for multiple significance testing. Stat Med 9: 811-818.
28. Moller S, Croning MD, Apweiler R (2001) Evaluation of methods for the prediction of membrane spanning regions. Bioinformatics 17: 646-653.
29. Bendtsen JD, Nielsen H, Von Heijne G, Brunak S (2004) Improved prediction of signal peptides: SignalP 3.0. J Mol Biol 340: 783-795.
30. Gardy JL, Laird MR, Chen F, Rey S, Walsh CJ, et al. (2005) PSORTb v.2.0: expanded prediction of bacterial protein subcellular localization and insights gained from comparative proteome analysis. Bioinformatics 21: 617-623.
31. Grote A, Hiller K, Scheer M, Munch R, Nortemann B, et al. (2005) JCat: a novel tool to adapt codon usage of a target gene to its potential expression host. Nucleic Acids Res 33: W526-531.
32. Molina DM, Pal S, Kayala MA, Teng A, Kim PJ, et al. (2010) Identification of immunodominant antigens of Chlamydia trachomatis using proteome micro- arrays. Vaccine 28: 3014-3024.
33. Baldi P, Brunak Sr (2001) Bioinformatics: the machine learning approach. Cambridge, Mass: MIT Press. xxi, 452 p.
34. Vapnik V (1995) The nature of statistical learning theory. New YorkNew York: Springer.
35. Lindroos HL, Mira A, Repsilber D, Vinnere O, Naslund K, et al. (2005) Characterization of the genome composition of Bartonella koehlerae by microarray comparative genomic hybridization profiling. J Bacteriol 187: 6155-6165.
36. Greene CE, McDermott M, Jameson PH, Atkins CL, Marks AM (1996) Bartonella henselae infection in cats: evaluation during primary infection, treatment, and rechallenge infection. J Clin Microbiol 34: 1682-1685.
37. Yamamoto K, Chomel BB, Kasten RW, Hew CM, Weber DK, et al. (2003) Infection and re-infection of domestic cats with various Bartonella species or types: B. henselae type I is protective against heterologous challenge with B. henselae type II. Vet Microbiol 92: 73-86.