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Volumn 19, Issue 16, 2010, Pages 3315-3327

Rampant drift in artificially fragmented populations of the endangered tidewater goby (Eucyclogobius newberryi)

Author keywords

conservation genetics; endangered species; fish; habitat fragmentation

Indexed keywords

MICROSATELLITE DNA; MITOCHONDRIAL DNA;

EID: 77955372816     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/j.1365-294X.2010.04755.x     Document Type: Article
Times cited : (21)

References (63)
  • 1
    • 13444311100 scopus 로고    scopus 로고
    • Geographical variation in the cephalic lateral line canals of Eucyclogobius newberryi (Teleostei, Gobiidae) and its comparison with molecular phylogeography
    • Ahnelt H, Goschl J, Dawson MN, Jacobs DK (2004) Geographical variation in the cephalic lateral line canals of Eucyclogobius newberryi (Teleostei, Gobiidae) and its comparison with molecular phylogeography. Folia Zoologica, 53, 385 398.
    • (2004) Folia Zoologica , vol.53 , pp. 385-398
    • Ahnelt, H.1    Goschl, J.2    Dawson, M.N.3    Jacobs, D.K.4
  • 3
    • 0000620617 scopus 로고
    • Intraspecific phylogeography: The mitochondrial DNA bridge between population genetics and systematics
    • Avise JC, Arnold J, Ball RM et al. (1987) Intraspecific phylogeography: the mitochondrial DNA bridge between population genetics and systematics. Annual Review of Ecology and Systematics, 18, 498 522.
    • (1987) Annual Review of Ecology and Systematics , vol.18 , pp. 498-522
    • Avise, J.C.1    Arnold, J.2    Ball, R.M.3
  • 6
    • 7044264955 scopus 로고    scopus 로고
    • How to track and assess genotyping errors in population genetics studies
    • Bonin A, Bellemain E, Eidesen PB et al. (2004) How to track and assess genotyping errors in population genetics studies. Molecular Ecology, 13, 3261 3273.
    • (2004) Molecular Ecology , vol.13 , pp. 3261-3273
    • Bonin, A.1    Bellemain, E.2    Eidesen, P.B.3
  • 7
    • 77955407347 scopus 로고    scopus 로고
    • California Coastal Commission. Application file number: 1-97-76. San Francisco, CA
    • California Coastal Commission (1999) Staff report regular calendar. Application file number: 1-97-76. San Francisco, CA.
    • (1999) Staff Report Regular Calendar
  • 9
    • 0033166229 scopus 로고    scopus 로고
    • Effects of natural habitat fragmentation on an endemic scrub lizard (Sceloporus woodi): An historical perspective based on a mitochondrial DNA gene geneology
    • Clark AM, Bowen BW, Branch LC (1999) Effects of natural habitat fragmentation on an endemic scrub lizard (Sceloporus woodi): an historical perspective based on a mitochondrial DNA gene geneology. Molecular Ecology, 8, 1093 1104.
    • (1999) Molecular Ecology , vol.8 , pp. 1093-1104
    • Clark, A.M.1    Bowen, B.W.2    Branch, L.C.3
  • 10
    • 0002962808 scopus 로고
    • Allozyme variability in the tidewater goby, Eucyclogobius newberryi (Pisces: Gobiidea)
    • Crabtree CB (1985) Allozyme variability in the tidewater goby, Eucyclogobius newberryi (Pisces: Gobiidea). Isozyme Bulletin, 18, 70.
    • (1985) Isozyme Bulletin , vol.18 , pp. 70
    • Crabtree, C.B.1
  • 11
    • 0034913922 scopus 로고    scopus 로고
    • Phylogeography of the tidewater goby, Eucyclogobius newberryi (Teleostei, Gobiidae), in coastal California
    • Dawson MN, Stanton JL, Jacobs DK (2001) Phylogeography of the tidewater goby, Eucyclogobius newberryi (Teleostei, Gobiidae), in coastal California. Evolution, 55, 1167 1179.
    • (2001) Evolution , vol.55 , pp. 1167-1179
    • Dawson, M.N.1    Stanton, J.L.2    Jacobs, D.K.3
  • 12
    • 0036017138 scopus 로고    scopus 로고
    • Comparative phylogeography of sympatric sister species, Clevelandia ios and Eucyclogobius newberryi (Teleostei, Gobiidae), across the California transition zone
    • Dawson MN, Louie KD, Jacobs DK et al. (2002) Comparative phylogeography of sympatric sister species, Clevelandia ios and Eucyclogobius newberryi (Teleostei, Gobiidae), across the California transition zone. Molecular Ecology, 11, 1065 1075.
    • (2002) Molecular Ecology , vol.11 , pp. 1065-1075
    • Dawson, M.N.1    Louie, K.D.2    Jacobs, D.K.3
  • 13
    • 33751330712 scopus 로고    scopus 로고
    • Mitigating scoring errors in microsatellite data from wild populations
    • DeWoody J, Nason JD, Hipkins VD (2006) Mitigating scoring errors in microsatellite data from wild populations. Molecular Ecology Notes, 6, 951 957.
    • (2006) Molecular Ecology Notes , vol.6 , pp. 951-957
    • Dewoody, J.1    Nason, J.D.2    Hipkins, V.D.3
  • 14
    • 74749087068 scopus 로고    scopus 로고
    • Rangewide microsatellite phylogeography of the endangered tidewater goby, (Eucyclogobius newberryi) (Teleostei: Gobionellidae), a genetically subdivided coastal fish with marine dispersal
    • Earl DA, Louie KD, Bardeleben C et al. (2010) Rangewide microsatellite phylogeography of the endangered tidewater goby, (Eucyclogobius newberryi) (Teleostei: Gobionellidae), a genetically subdivided coastal fish with marine dispersal. Conservation Genetics, 11, 103 114.
    • (2010) Conservation Genetics , vol.11 , pp. 103-114
    • Earl, D.A.1    Louie, K.D.2    Bardeleben, C.3
  • 15
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study
    • Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Molecular Ecology, 14, 2611 2620.
    • (2005) Molecular Ecology , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 16
    • 0041817568 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies
    • Falush D, Stephens M, Pritchard JK (2003) Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics, 164, 1567 1587.
    • (2003) Genetics , vol.164 , pp. 1567-1587
    • Falush, D.1    Stephens, M.2    Pritchard, J.K.3
  • 18
    • 0141494461 scopus 로고    scopus 로고
    • Genetics and conservation biology
    • Frankham R (2003) Genetics and conservation biology. CR Biologies, 326, S22 S29.
    • (2003) CR Biologies , vol.326
    • Frankham, R.1
  • 20
    • 18744385584 scopus 로고    scopus 로고
    • Extreme genetic differentiation among the remnant populations of marble trout (Salmo marmoratus) in Slovenia
    • Fumagalli L, Snoj A, Jesensek D et al. (2002) Extreme genetic differentiation among the remnant populations of marble trout (Salmo marmoratus) in Slovenia. Molecular Ecology, 11, 2711 2716.
    • (2002) Molecular Ecology , vol.11 , pp. 2711-2716
    • Fumagalli, L.1    Snoj, A.2    Jesensek, D.3
  • 21
    • 77955371519 scopus 로고    scopus 로고
    • Geospiza, Inc. Seattle, WA
    • Geospiza, Inc (2006) FINCH TV 1.4. Seattle, WA.
    • (2006) FINCH TV 1.4.
  • 22
    • 0345679697 scopus 로고
    • Seasonal ovarian cycle in the tidewater goby, Eucyclogobius newberryi (Gobiidae)
    • Goldberg SR (1977) Seasonal ovarian cycle in the tidewater goby, Eucyclogobius newberryi (Gobiidae). The Southwestern Naturalist, 22, 557 559.
    • (1977) The Southwestern Naturalist , vol.22 , pp. 557-559
    • Goldberg, S.R.1
  • 23
    • 0034987132 scopus 로고    scopus 로고
    • Bottlenecks, drift and differentiation: The population structure and demographic history of sika deer (Cervus nippon) in the Japanese archipelago
    • Goodman SJ, Tamate HB, Wilson R et al. (2001) Bottlenecks, drift and differentiation: the population structure and demographic history of sika deer (Cervus nippon) in the Japanese archipelago. Molecular Ecology, 10, 1357 1370.
    • (2001) Molecular Ecology , vol.10 , pp. 1357-1370
    • Goodman, S.J.1    Tamate, H.B.2    Wilson, R.3
  • 24
    • 85007320774 scopus 로고
    • FSTAT Version 1.2.: A computer program to calculate F-statistics
    • Goudet J (1995) FSTAT Version 1.2.: a computer program to calculate F-statistics. Journal of Heredity, 86, 485 486.
    • (1995) Journal of Heredity , vol.86 , pp. 485-486
    • Goudet, J.1
  • 25
    • 33645234621 scopus 로고    scopus 로고
    • University of Lausanne. Lausanne, Switzerland
    • Goudet J (1999) PCA-GEN for Windows, University of Lausanne, Lausanne, Switzerland.
    • (1999) PCA-GEN for Windows
    • Goudet, J.1
  • 26
    • 0030454565 scopus 로고    scopus 로고
    • Testing differentiation in diploid populations
    • Goudet J, Raymond M, Demeeus T, Rousset F (1996) Testing differentiation in diploid populations. Genetics, 144, 1933 1940.
    • (1996) Genetics , vol.144 , pp. 1933-1940
    • Goudet, J.1    Raymond, M.2    Demeeus, T.3    Rousset, F.4
  • 27
    • 0942300467 scopus 로고    scopus 로고
    • Phylogeography of the common goby, Pomatoschitus microps, with particular emphasis on the colonization of the Mediterranean and the North Sea
    • Gysels ES, Hellemans B, Pampoulie C, Volckaert FAM (2004) Phylogeography of the common goby, Pomatoschitus microps, with particular emphasis on the colonization of the Mediterranean and the North Sea. Molecular Ecology, 13, 403 417.
    • (2004) Molecular Ecology , vol.13 , pp. 403-417
    • Gysels, E.S.1    Hellemans, B.2    Pampoulie, C.3    Volckaert, F.A.M.4
  • 29
    • 0032965634 scopus 로고    scopus 로고
    • Perspective: Highly variable loci and their interpretation in evolution and conservation
    • Hedrick PW (1999) Perspective: highly variable loci and their interpretation in evolution and conservation. Evolution, 53, 313 318.
    • (1999) Evolution , vol.53 , pp. 313-318
    • Hedrick, P.W.1
  • 31
    • 0031946739 scopus 로고    scopus 로고
    • Loss of genetic diversity and fitness in Common Toad (Bufo bufo) populations isolated by inimical habitat
    • Hitchings SP, Beebee TJC (1998) Loss of genetic diversity and fitness in Common Toad (Bufo bufo) populations isolated by inimical habitat. Journal of Evolutionary Biology, 11, 269 283.
    • (1998) Journal of Evolutionary Biology , vol.11 , pp. 269-283
    • Hitchings, S.P.1    Beebee, T.J.C.2
  • 32
    • 0033427602 scopus 로고    scopus 로고
    • Correlation of pairwise genetic and geographic distance measures: Inferring the relative influences of gene flow and drift on the distribution of genetic variability
    • Hutchinson DW, Templeton AR (1999) Correlation of pairwise genetic and geographic distance measures: inferring the relative influences of gene flow and drift on the distribution of genetic variability. Evolution, 53, 1898 1914.
    • (1999) Evolution , vol.53 , pp. 1898-1914
    • Hutchinson, D.W.1    Templeton, A.R.2
  • 34
    • 34347357663 scopus 로고    scopus 로고
    • Does habitat fragmentation reduce fitness and adaptability? A case study of the common frog (Rana temporara)
    • Johansson M, Primmer CR, Merila J (2007) Does habitat fragmentation reduce fitness and adaptability? A case study of the common frog (Rana temporara). Molecular Ecology, 16, 2693 2700.
    • (2007) Molecular Ecology , vol.16 , pp. 2693-2700
    • Johansson, M.1    Primmer, C.R.2    Merila, J.3
  • 35
    • 0345530941 scopus 로고    scopus 로고
    • Contrasting patterns of mitochondrial and microsatellite population structure in fragmented populations of greater prairie-chickens
    • Johnson JA, Toepfer JE, Dunn P (2003) Contrasting patterns of mitochondrial and microsatellite population structure in fragmented populations of greater prairie-chickens. Molecular Ecology, 12, 3335 3347.
    • (2003) Molecular Ecology , vol.12 , pp. 3335-3347
    • Johnson, J.A.1    Toepfer, J.E.2    Dunn, P.3
  • 36
    • 4344571423 scopus 로고    scopus 로고
    • Temporal changes in allele frequencies and low effective population size in greater prairie-chickens
    • Johnson JA, Bellinger MR, Toepfer JE, Dunn P (2004) Temporal changes in allele frequencies and low effective population size in greater prairie-chickens. Molecular Ecology, 13, 2617 2630.
    • (2004) Molecular Ecology , vol.13 , pp. 2617-2630
    • Johnson, J.A.1    Bellinger, M.R.2    Toepfer, J.E.3    Dunn, P.4
  • 37
    • 39749138756 scopus 로고    scopus 로고
    • Historical fragmentation of islands and genetic drift in populations of Galapagos lava lizards (Microlophus albemarlensis complex)
    • Jordan MA, Snell HL (2008) Historical fragmentation of islands and genetic drift in populations of Galapagos lava lizards (Microlophus albemarlensis complex). Molecular Ecology, 17, 1224 1237.
    • (2008) Molecular Ecology , vol.17 , pp. 1224-1237
    • Jordan, M.A.1    Snell, H.L.2
  • 38
    • 0037460775 scopus 로고    scopus 로고
    • Recent habitat fragmentation caused by major roads leads to reduction of gene flow and loss of genetic variability in ground beetles
    • Keller I, Largiader CR (2003) Recent habitat fragmentation caused by major roads leads to reduction of gene flow and loss of genetic variability in ground beetles. Proceeding of the Royal Society of London, Series B, Biological Sciences, 270, 417 423.
    • (2003) Proceeding of the Royal Society of London, Series B, Biological Sciences , vol.270 , pp. 417-423
    • Keller, I.1    Largiader, C.R.2
  • 39
    • 1442289128 scopus 로고    scopus 로고
    • Barrier breaching process and barrier spit breach, Stone Lagoon, California
    • Krauss NC, Militello A, Todoroff G (2002) Barrier breaching process and barrier spit breach, Stone Lagoon, California. Shore and Beach, 70, 21 28.
    • (2002) Shore and Beach , vol.70 , pp. 21-28
    • Krauss, N.C.1    Militello, A.2    Todoroff, G.3
  • 40
    • 0032715843 scopus 로고    scopus 로고
    • Extirpation and recolonization in a metapopulation of an endangered fish, the tidewater goby
    • Lafferty KD, Swift CC, Ambrose RF (1999) Extirpation and recolonization in a metapopulation of an endangered fish, the tidewater goby. Conservation Biology, 12, 1447 1453.
    • (1999) Conservation Biology , vol.12 , pp. 1447-1453
    • Lafferty, K.D.1    Swift, C.C.2    Ambrose, R.F.3
  • 44
    • 0014054519 scopus 로고
    • The detection of disease clustering and a generalized regression approach
    • Mantel N (1967) The detection of disease clustering and a generalized regression approach. Cancer Research, 27, 209 220.
    • (1967) Cancer Research , vol.27 , pp. 209-220
    • Mantel, N.1
  • 45
    • 41749124522 scopus 로고    scopus 로고
    • Spawning time, fecundity, habitat utilization, and parasites of a northern California population of tidewater goby, Eucyclogobius newberryi
    • McGourty K, Kinziger A, Goldsmith G (2008) Spawning time, fecundity, habitat utilization, and parasites of a northern California population of tidewater goby, Eucyclogobius newberryi. California Fish and Game, 94, 18 32.
    • (2008) California Fish and Game , vol.94 , pp. 18-32
    • McGourty, K.1    Kinziger, A.2    Goldsmith, G.3
  • 47
    • 0034803886 scopus 로고    scopus 로고
    • Isolation and characterization of four microsatellite loci in the tidewater goby (Eucyclogobius newberryi)
    • Mendonca H, Smith J, Brinegar C (2001) Isolation and characterization of four microsatellite loci in the tidewater goby (Eucyclogobius newberryi). Marine Biotechnology, 3, 91 95.
    • (2001) Marine Biotechnology , vol.3 , pp. 91-95
    • Mendonca, H.1    Smith, J.2    Brinegar, C.3
  • 48
    • 0018147653 scopus 로고
    • Estimation of average heterozygosity and genetic distance for small number of individuals
    • Nei M (1978) Estimation of average heterozygosity and genetic distance for small number of individuals. Genetics, 89, 583 590.
    • (1978) Genetics , vol.89 , pp. 583-590
    • Nei, M.1
  • 50
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens P, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics, 155, 945 959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, P.2    Donnelly, P.3
  • 51
    • 0000625869 scopus 로고
    • Analyzing tables of statistical tests
    • Rice WR (1989) Analyzing tables of statistical tests. Evolution, 43, 223 225.
    • (1989) Evolution , vol.43 , pp. 223-225
    • Rice, W.R.1
  • 52
    • 0026548159 scopus 로고
    • Population growth makes waves in the distribution of pairwise genetic differences
    • Rogers AR, Harpending H (1992) Population growth makes waves in the distribution of pairwise genetic differences. Molecular Biology and Evolution, 9, 552 569.
    • (1992) Molecular Biology and Evolution , vol.9 , pp. 552-569
    • Rogers, A.R.1    Harpending, H.2
  • 53
    • 1342331102 scopus 로고    scopus 로고
    • Distruct: A program for the graphical display of population structure
    • Rosenberg NA (2004) Distruct: a program for the graphical display of population structure. Molecular Ecology Notes, 4, 137 138.
    • (2004) Molecular Ecology Notes , vol.4 , pp. 137-138
    • Rosenberg, N.A.1
  • 55
    • 0028170269 scopus 로고
    • Worldwide initiation of Holocene marine deltas by deceleration of sea level rise
    • Stanley DJ, Warne AG (1994) Worldwide initiation of Holocene marine deltas by deceleration of sea level rise. Science, 265, 228 231.
    • (1994) Science , vol.265 , pp. 228-231
    • Stanley, D.J.1    Warne, A.G.2
  • 56
    • 0033006020 scopus 로고    scopus 로고
    • The ecology, behavior, and conservation of the tidewater goby, Eucyclogobius newberryi
    • Swenson RO (1999) The ecology, behavior, and conservation of the tidewater goby, Eucyclogobius newberryi. Environmental Biology of Fishes, 55, 99 114.
    • (1999) Environmental Biology of Fishes , vol.55 , pp. 99-114
    • Swenson, R.O.1
  • 59
    • 0003401144 scopus 로고
    • Endangered and threatened wildlife and plants determination of endangered species status for the tidewater goby
    • United States Fish and Wildlife Service
    • United States Fish and Wildlife Service (1994) Endangered and threatened wildlife and plants determination of endangered species status for the tidewater goby. Federal Register, 59, 5494 5498.
    • (1994) Federal Register , vol.59 , pp. 5494-5498
  • 60
    • 77955343011 scopus 로고    scopus 로고
    • United States Fish and Wildlife Service. United States Fish and Wildlife Service. Portland, OR
    • United States Fish and Wildlife Service (2005) Recovery Plan for the Tidewater Goby (Eucyclogobius newberryi). United States Fish and Wildlife Service, Portland, OR.
    • (2005) Recovery Plan for the Tidewater Goby (Eucyclogobius Newberryi).
  • 62
    • 77955349079 scopus 로고    scopus 로고
    • Endangered and threatened wildlife and plants: Revised designation of critical habitat for the tidewater goby (Eucyclogobius newberryi): Final rule
    • United States Fish and Wildlife Service
    • United States Fish and Wildlife Service (2008) Endangered and threatened wildlife and plants: revised designation of critical habitat for the tidewater goby (Eucyclogobius newberryi): final rule. Federal Register, 73, 5920 6006.
    • (2008) Federal Register , vol.73 , pp. 5920-6006
  • 63
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • This work was part of T.M.'s Master's of Science thesis on tidewater goby conservation genetics. G.G. is a biologist with the United States Fish and Wildlife Service and has lead tidewater goby field studies in the North Coast region for the past 8 years. D.J. takes a synthetic approach to reconstructing evolutionary history by combining information from large-scale physical process with molecular approaches. A.K.'s research is focused on using genetic data to study issues involving the conservation, management, systematics and evolution of fishes
    • Weir BS, Cockerham CC (1984) Estimating F-statistics for the analysis of population structure. Evolution, 38, 1358 1370. This work was part of T.M.'s Master's of Science thesis on tidewater goby conservation genetics. G.G. is a biologist with the United States Fish and Wildlife Service and has lead tidewater goby field studies in the North Coast region for the past 8 years. D.J. takes a synthetic approach to reconstructing evolutionary history by combining information from large-scale physical process with molecular approaches. A.K.'s research is focused on using genetic data to study issues involving the conservation, management, systematics and evolution of fishes.
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2


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