Molecular detection of transcriptionally active bacteria from failed prosthetic hip joints removed during revision arthroplasty

European Journal of Clinical Microbiology and Infectious Diseases

Volumn 29, Issue 7, 2010, Pages 823-834

  Riggio, M P ^a   Dempsey, Kate E ^a   Lennon, Allan ^a   Allan, David ^b   Ramage, Gordon ^a   Bagg, Jeremy ^a  

^a GLASGOW DENTAL HOSPITAL AND SCHOOL   (United Kingdom)

^b QUEEN ELIZABETH UNIVERSITY HOSPITAL   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL RNA; COMPLEMENTARY DNA; ERYTHROMYCIN; METICILLIN; PENICILLIN G; RNA 16S; BACTERIAL DNA;

ACINETOBACTER; ADULT; AGED; ANTIBIOTIC RESISTANCE; ARTICLE; BACILLUS; BACTERIUM ADHERENCE; BACTERIUM CULTURE; BACTERIUM IDENTIFICATION; BIOFILM; BRADYRHIZOBIUM; BREVUNDIMONAS; CAULOBACTER; CLINICAL ARTICLE; CLOSTRIDIA; COAGULASE NEGATIVE STAPHYLOCOCCUS; COMAMONADACEAE; ESCHERICHIA; ESCHERICHIA COLI; FEMALE; GENE AMPLIFICATION; HIP ARTHROPLASTY; HIP PROSTHESIS; HUMAN; LYSOBACTER; MALE; METHICILLIN RESISTANT STAPHYLOCOCCUS AUREUS; METHYLOBACTERIUM; MOLECULAR CLONING; NUCLEOTIDE SEQUENCE; OXALOBACTERACEAE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROSTHESIS FAILURE; PROSTHESIS INFECTION; PROSTHESIS LOOSENING; PROTEOBACTERIA; REOPERATION; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RHODOCOCCUS; RNA EXTRACTION; ROSEOBACTER; SEQUENCE ANALYSIS; SEQUENCE DATABASE; SHIGELLA; SPECIES IDENTIFICATION; SPHINGOMONAS; STAPHYLOCOCCUS; STAPHYLOCOCCUS AUREUS; ULTRASOUND; ARTHROPLASTY; BACTERIA; CASE REPORT; CLASSIFICATION; DNA FINGERPRINTING; DNA SEQUENCE; GENETIC TRANSCRIPTION; GENETICS; GROWTH, DEVELOPMENT AND AGING; HIP; INFECTION; ISOLATION AND PURIFICATION; METABOLISM; MICROBIAL VIABILITY; MICROBIOLOGY; MIDDLE AGED; SURGERY;

ADULT; AGED; ARTHROPLASTY; BACTERIA; CLONING, MOLECULAR; DNA FINGERPRINTING; DNA, BACTERIAL; DNA, COMPLEMENTARY; HIP JOINT; HUMANS; MALE; MICROBIAL VIABILITY; MIDDLE AGED; POLYMERASE CHAIN REACTION; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; PROSTHESIS-RELATED INFECTIONS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; TRANSCRIPTION, GENETIC;

EID: 77955343582     PISSN: 09349723     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10096-010-0934-y     Document Type: Article

References (61)

1. R Patel DR Osmon AD Hanssen 2005 The diagnosis of prosthetic joint infection: current techniques and emerging technologies Clin Orthop Relat Res 437 55 58 10.1097/01.blo.0000175121.73675.fd 16056026 (Pubitemid 41099066)
2. AD Toms D Davidson BA Masri CP Duncan 2006 The management of peri-prosthetic infection in total joint arthroplasty J Bone Joint Surg Br 88 149 155 1:STN:280:DC%2BD28%2FksFyjtA%3D%3D 16434514
3. NHS Direct Health Encyclopaedia. Hip replacement. Available online at: http://www.nhsdirect.nhs.uk/articles/article.aspx?articleId=522
4. JR Lentino 2003 Prosthetic joint infections: bane of orthopedists, challenge for infectious disease specialists Clin Infect Dis 36 1157 1161 10.1086/374554 12715311 (Pubitemid 36549638)
5. PF Lachiewicz GD Rogers HC Thomason 1996 Aspiration of the hip joint before revision total hip arthroplasty. Clinical and laboratory factors influencing attainment of a positive culture J Bone Joint Surg Am 78 749 754 1:STN:280:DyaK283hvFShtg%3D%3D 8642032
6. Thomas JG, Ramage G, Lopez-Ribot JL (2004) Biofilms and implant infections. In: Ghannoum M, O'Toole G (eds) Microbial biofilms. American Society of Microbiology Press, Washington, pp 269-293
7. BL Atkins N Athanasou JJ Deeks DWM Crook H Simpson TEA Peto P McLardy-Smith AR Berendt 1998 Prospective evaluation of criteria for microbiological diagnosis of prosthetic-joint infection at revision arthroplasty. The OSIRIS Collaborative Study Group J Clin Microbiol 36 2932 2939 1:STN:280:DyaK1cvhtFCjtA%3D%3D 9738046
8. MM Tunney S Patrick SP Gorman JR Nixon N Anderson RI Davis D Hanna G Ramage 1998 Improved detection of infection in hip replacements. A currently underestimated problem J Bone Joint Surg Br 80 568 572 10.1302/0301-620X.80B4. 8473 1:STN:280:DyaK1czmtleqsQ%3D%3D 9699813 (Pubitemid 28351963)
9. KE Dempsey MP Riggio A Lennon VE Hannah G Ramage D Allan J Bagg 2007 Identification of bacteria on the surface of clinically infected and non-infected prosthetic hip joints removed during revision arthroplasties by 16S rRNA gene sequencing and by microbiological culture Arthritis Res Ther 9 R46 10.1186/ar2201 17501992 (Pubitemid 46888032)
10. A Trampuz KE Piper MJ Jacobson AD Hanssen KK Unni DR Osmon JN Mandrekar FR Cockerill JM Steckelberg JF Greenleaf R Patel 2007 Sonication of removed hip and knee prostheses for diagnosis of infection N Engl J Med 357 654 663 10.1056/NEJMoa061588 1:CAS:528:DC%2BD2sXptFKru7w%3D 17699815 (Pubitemid 47267235)
11. MT Clarke CP Roberts PTH Lee J Gray GS Keene N Rushton 2004 Polymerase chain reaction can detect bacterial DNA in aseptically loose total hip arthroplasties Clin Orthop Relat Res 427 132 137 10.1097/01.blo.0000136839. 90734.b7 15552149 (Pubitemid 39362843)
12. MM Tunney S Patrick MD Curran G Ramage D Hanna JR Nixon SP Gorman RI Davis N Anderson 1999 Detection of prosthetic hip infection at revision arthroplasty by immunofluorescence microscopy and PCR amplification of the bacterial 16S rRNA gene J Clin Microbiol 37 3281 3290 1:CAS:528: DyaK1MXmsFekt7k%3D 10488193
13. BD Mariani RS Tuan 1998 Advances in the diagnosis of infection in prosthetic joint implants Mol Med Today 4 207 213 10.1016/S1357-4310(98)80007-5 1:STN:280:DyaK1c3nsFOntQ%3D%3D 9612800 (Pubitemid 28255551)
14. MJ Levine BA Mariani RS Tuan RE Booth Jr 1995 Molecular genetic diagnosis of infected total joint arthroplasty J Arthroplasty 10 93 94 10.1016/S0883-5403(05)80107-X 1:STN:280:DyaK2M3kvVehsQ%3D%3D 7730838
15. CJ Cox KE Kempsell JS Hill Gaston 2003 Investigation of infectious agents associated with arthritis by reverse transcription PCR of bacterial rRNA Arthritis Res Ther 5 R1 R8 10.1186/ar602 1:CAS:528:DC%2BD38XpsFWls7Y%3D 12716447
16. KE Kempsell CJ Cox M Hurle A Wong S Wilkie ED Zanders JS Hill Gaston JS Crowe 2000 Reverse transcriptase-PCR analysis of bacterial rRNA for detection and characterization of bacterial species in arthritis synovial tissue Infect Immun 68 6012 6026 10.1128/IAI.68.10.6012-6026.2000 1:CAS:528: DC%2BD3cXmvVGntL4%3D 10992514
17. Lane DJ (1991) 16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M (eds) Nucleic acid techniques in bacterial systematics. John Wiley and Sons, New York, pp 115-175
18. MP Riggio A Lennon D Wray 2000 Detection of Helicobacter pylori DNA in recurrent aphthous stomatitis tissue by PCR J Oral Pathol Med 29 507 513 10.1034/j.1600-0714.2000.291005.x 1:CAS:528:DC%2BD3cXnslCnsbY%3D 11048967
19. SF Altschul TL Madden AA Schäffer J Zhang Z Zhang W Miller DJ Lipman 1997 Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res 25 3389 3402 10.1093/nar/25.17.3389 1:CAS:528:DyaK2sXlvFyhu7w%3D 9254694 (Pubitemid 27359211)
20. A Shimizu M Akiyama Y Ishijima K Hama T Kunimaru T Naganuma 2006 Molecular characterization of microbial communities in fault-bordered aquifers in the Miocene formation of northernmost Japan Geobiol 4 203 213 10.1111/j.1472-4669.2006.00077.x 1:CAS:528:DC%2BD28XhtVKju7bF (Pubitemid 44259405)
21. CA Bartzokas R Johnson M Jane MV Martin PK Pearce Y Saw 1994 Relation between mouth and haematogenous infection in total joint replacements Br Med J 309 506 508 1:STN:280:DyaK2cznt1Kquw%3D%3D
22. T Stoll G Stucki P Brühlmann M Vogt N Gschwend BA Michel 1996 Infection of a total knee joint prosthesis by Peptostreptococcus micros and Propionibacterium acnes in an elderly RA patient: implant salvage with longterm antibiotics and needle aspiration/irrigation Clin Rheumatol 15 399 402 10.1007/BF02230366 1:STN:280:DyaK2s%2FgsFykug%3D%3D 8853177 (Pubitemid 26239960)
23. BJ Waldman MA Mont DS Hungerford 1997 Total knee arthroplasty infections associated with dental procedures Clin Orthop Relat Res 343 164 172 10.1097/00003086-199710000-00027 9345222
24. DM LaPorte BJ Waldman MA Mont DS Hungerford 1999 Infections associated with dental procedures in total hip arthroplasty J Bone Joint Surg Br 81 56 59 10.1302/0301-620X.81B1.8608 1:STN:280:DyaK1M7msFemtw%3D%3D 10068004 (Pubitemid 29043410)
25. L Tronstad PT Sunde 2003 The evolving new understanding of endodontic infections Endod Top 6 57 77 10.1111/j.1601-1546.2003.00039.x
26. PB Lockhart B Loven MT Brennan PC Fox 2007 The evidence base for the efficacy of antibiotic prophylaxis in dental practice J Am Dent Assoc 138 458 474 17403736
27. F Fenollar V Roux A Stein M Drancourt D Raoult 2006 Analysis of 525 samples to determine the usefulness of PCR amplification and sequencing of the 16S rRNA gene for diagnosis of bone and joint infections J Clin Microbiol 44 1018 1028 10.1128/JCM.44.3.1018-1028.2006 1:CAS:528:DC%2BD28XjsVylurY%3D 16517890
28. W Zimmerli A Trampuz PE Ochsner 2004 Prosthetic-joint infections N Engl J Med 351 1645 1654 10.1056/NEJMra040181 1:CAS:528:DC%2BD2cXos1Whtbo%3D 15483283 (Pubitemid 39350425)
29. K Panousis P Grigoris I Butcher B Rana JH Reilly DL Hamblen 2005 Poor predictive value of broad-range PCR for the detection of arthroplasty infection in 92 cases Acta Orthop 76 341 346 16156461
30. SY An M Asahara K Goto H Kasai A Yokota 2007 Virgibacillus halophilus sp. nov., spore-forming bacteria isolated from soil in Japan Int J Syst Evol Microbiol 57 1607 1611 10.1099/ijs.0.64307-0 17625203 (Pubitemid 47163016)
31. D Graur T Pupko 2001 The Permian bacterium that isn't Mol Biol Evol 18 1143 1146 1:CAS:528:DC%2BD3MXktFemu70%3D 11371604
32. M D'Amico S Mangano M Spinelli E Sala EF Vigano R Grilli M Fraticelli C Grillo A Limido 2005 Epidemic of infections caused by 'aquatic' bacteria in patients undergoing hemodialysis via central venous catheters G Ital Nefrol 22 508 513 16267809
33. C-Y Chi C-P Fung W-W Wong C-Y Liu 2004 Brevundimonas bacteremia: two case reports and literature review Scand J Infect Dis 36 59 61 10.1080/ 00365540310018879 15000562 (Pubitemid 38219774)
34. Y Sofer S Zmira J Amir 2007 Brevundimonas vesicularis septic arthritis in an immunocompetent child Eur J Pediatr 166 77 78 10.1007/s00431-006-0216-y 16941131 (Pubitemid 44900528)
35. R Marques da Silva DA Caugant ERK Eribe JA Aas PS Lingaas O Geiran L Tronstad I Olsen 2006 Bacterial diversity in aortic aneurysms determined by 16S ribosomal RNA gene analysis J Vasc Surg 44 1055 1060 10.1016/j.jvs.2006.07.021 17098542 (Pubitemid 46107234)
36. BJ Paster WA Falkler Jr CO Enwonwu EO Idigbe KO Savage VA Levanos MA Tamer RL Ericson CN Lau FE Dewhirst 2002 Prevalent bacterial species and novel phylotypes in advanced noma lesions J Clin Microbiol 40 2187 2191 10.1128/JCM.40.6.2187-2191.2002 1:STN:280:DC%2BD38zitlynsw%3D%3D 12037085 (Pubitemid 34596405)
37. ACM Wildeboer-Veloo HJM Harmsen GW Welling JE Degener 2007 Development of 16S rRNA-based probes for the identification of Gram-positive anaerobic cocci isolated from human clinical specimens Clin Microbiol Infect 13 985 992 10.1111/j.1469-0691.2007.01803.x 1:CAS:528:DC%2BD2sXht1WnsrfI 17714522 (Pubitemid 47382254)
38. Y Song C Liu SM Finegold 2007 Peptoniphilus gorbachii sp. nov., Peptoniphilus olsenii sp. nov., and Anaerococcus murdochii sp. nov. isolated from clinical specimens of human origin J Clin Microbiol 45 1746 1752 10.1128/JCM.00213-07 1:CAS:528:DC%2BD2sXnsVKrtLc%3D 17428937 (Pubitemid 46933901)
39. WJ Looney 2005 Role of Stenotrophomonas maltophilia in hospital-acquired infection Br J Biomed Sci 62 145 154 1:STN:280:DC%2BD2Mrit1ykug%3D%3D 16196464
40. MR Guilhabert BC Kirkpatrick 2005 Identification of Xylella fastidiosa antivirulence genes: hemagglutinin adhesins contribute to X. fastidiosa biofilm maturation and colonization and attenuate virulence Mol Plant Microbe Interact 18 856 868 10.1094/MPMI-18-0856 1:CAS:528:DC%2BD2MXmslGhsr0%3D 16134898 (Pubitemid 41061484)
41. M-A Jacques K Josi A Darrasse R Samson 2005 Xanthomonas axonopodis pv. phaseoli var. fuscans is aggregated in stable biofilm population sizes in the phyllosphere of field-grown beans Appl Environ Microbiol 71 2008 2015 10.1128/AEM.71.4.2008-2015.2005 1:CAS:528:DC%2BD2MXjsVOqurY%3D 15812033 (Pubitemid 40546125)
42. T-P Huang EB Somers ACL Wong 2006 Differential biofilm formation and motility associated with lipopolysaccharide/exopolysaccharide-coupled biosynthetic genes in Stenotrophomonas maltophilia J Bacteriol 188 3116 3120 10.1128/JB.188.8.3116-3120.2006 1:CAS:528:DC%2BD28Xjslejtb0%3D 16585771
43. P Kämpfer R Rosselló-Mora M Hermansson F Persson B Huber E Falsen HJ Busse 2007 Undibacterium pigrum gen. nov., sp. nov., isolated from drinking water Int J Syst Evol Microbiol 57 1510 1515 10.1099/ijs.0.64785-0 17625185 (Pubitemid 47162998)
44. LC Simões M Simões MJ Vieira 2007 Biofilm interactions between distinct bacterial genera isolated from drinking water Appl Environ Microbiol 73 6192 6200 10.1128/AEM.00837-07 17675433 (Pubitemid 47548029)
45. N Saxena R Misra A Aggarwal 2006 Is the enthesitis-related arthritis subtype of juvenile idiopathic arthritis a form of chronic reactive arthritis? Rheumatology 45 1129 1132 10.1093/rheumatology/kel056 1:STN:280: DC%2BD28ritVKqtw%3D%3D 16522678 (Pubitemid 44542102)
46. WR Abraham C Strömpl H Meyer S Lindholst ER Moore R Christ M Vancanneyt BJ Tindall A Bennasar J Smit M Tesar 1999 Phylogeny and polyphasic taxonomy of Caulobacter species. Proposal of Maricaulis gen. nov. with Maricaulis maris (Poindexter) comb. nov. as the type species, and emended description of the genera Brevundimonas and Caulobacter Int J Syst Bacteriol 49 1053 1073 10.1099/00207713-49-3-1053 1:CAS:528:DyaK1MXltVyqtrs%3D 10425763
47. JL Smith PM Fratamico NW Gunther 2007 Extraintestinal pathogenic Escherichia coli Foodborne Pathog Dis 4 134 163 10.1089/fpd.2007.0087 1:CAS:528:DC%2BD2sXntFWksLk%3D 17600482 (Pubitemid 47041354)
48. ME Falagas EA Karveli I Kelesidis T Kelesidis 2007 Community-acquired Acinetobacter infections Eur J Microbiol Infect Dis 26 857 868 10.1007/s10096-007-0365-6 1:STN:280:DC%2BD2snmtlSisQ%3D%3D (Pubitemid 350077206)
49. JC Davies BK Rubin 2007 Emerging and unusual gram-negative infections in cystic fibrosis Semin Respir Crit Car Med 28 312 321 10.1055/s-2007-981652 (Pubitemid 46982062)
50. M Torres-Tortosa J Arrizabalaga JL Villanueva J Gálvez M Leyes ME Valencia J Flores JM Peña E Pérez-Cecilia C Quereda 2003 Prognosis and clinical evaluation of infection caused by Rhodococcus equi in HIV-infected patients: a multicenter study of 67 cases Chest 123 1970 1976 10.1378/chest.123.6.1970 12796176 (Pubitemid 36706720)
51. H Rozsypal V Aster M Stahiková B Horová 2007 Rhodococcus equi infection in subjects infected with human immunodeficiency virus (HIV) Cas Lek Cesk 146 163 167 1:STN:280:DC%2BD2s7nsVertA%3D%3D 17373114
52. NN North SL Dollhopf L Petrie JD Istok DL Balkwill JE Kostka 2004 Change in bacterial community structure during in situ biostimulation of subsurface sediment cocontaminated with uranium and nitrate Appl Environ Microbiol 70 4911 4920 10.1128/AEM.70.8.4911-4920.2004 1:CAS:528:DC%2BD2cXms1eks74%3D 15294831 (Pubitemid 39095521)
53. JA Huber HP Johnson DA Butterfield JA Baross 2006 Microbial life in ridge flank crustal fluids Environ Microbiol 8 88 99 10.1111/j.1462-2920.2005.00872.x 1:CAS:528:DC%2BD28XitFSgur8%3D 16343325
54. O Kaiser A Pühler W Selbitschka 2001 Phylogenetic analysis of microbial diversity in the rhizoplane of oilseed rape (Brassica napus cv. Westar) employing cultivation-dependent and cultivation-independent approaches Microb Ecol 42 136 149 1:CAS:528:DC%2BD3MXmslOqtLo%3D 12024277
55. JF Rawls MA Mahowald RE Ley JI Gordon 2006 Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection Cell 127 423 433 10.1016/j.cell.2006.08.043 1:CAS:528: DC%2BD28XhtFOkt7rO 17055441 (Pubitemid 44572375)
56. MM Williams JWS Domingo MC Meckes CA Kelty HS Rochon 2004 Phylogenetic diversity of drinking water bacteria in a distribution system simulator J Appl Microbiol 96 954 964 10.1111/j.1365-2672.2004.02229.x 1:CAS:528: DC%2BD2cXksFOlsLw%3D 15078511 (Pubitemid 38582141)
57. JL Flanagan EL Brodie L Weng SV Lynch O Garcia R Brown P Hugenholtz TZ DeSantis GL Andersen JP Wiener-Kronish J Bristow 2007 Loss of bacterial diversity during antibiotic treatment of intubated patients colonized with Pseudomonas aeruginosa J Clin Microbiol 45 1954 1962 10.1128/JCM.02187-06 1:CAS:528:DC%2BD2sXnsVKqsb0%3D 17409203 (Pubitemid 46933932)
58. Oliver JD (2005) The viable but nonculturable state in bacteria. J Microbiol 43 Spec No:93-100
59. LJ Giesler GY Yuen 1998 Evaluation of Stenotrophomonas maltophilia strain C3 for biocontrol of brown patch disease Crop Prot 17 509 513 10.1016/S0261-2194(98)00049-0 (Pubitemid 28472231)
60. E Senol 2004 Stenotrophomonas maltophilia: the significance and role as a nosocomial pathogen J Hosp Infect 57 1 7 10.1016/j.jhin.2004.01.033 1:STN:280:DC%2BD2c3ksVGnug%3D%3D 15142709 (Pubitemid 38594514)
61. M Denton KG Kerr 1998 Microbiological and clinical aspects of infection associated with Stenotrophomonas maltophilia Clin Microbiol Rev 11 57 80 1:STN:280:DyaK1c7hvVOmtw%3D%3D 9457429