-
1
-
-
0015504248
-
Rate of depurination of native deoxyribonucleic acid
-
Lindahl, T. and Nyberg, B. (1972) Rate of depurination of native deoxyribonucleic acid Biochemistry 11, 3610-3618
-
(1972)
Biochemistry
, vol.11
, pp. 3610-3618
-
-
Lindahl, T.1
Nyberg, B.2
-
2
-
-
0027278557
-
Instability and decay of the primary structure of DNA
-
Lindahl, T. (1993) Instability and decay of the primary structure of DNA Nature 362, 709-715
-
(1993)
Nature
, vol.362
, pp. 709-715
-
-
Lindahl, T.1
-
3
-
-
0033152195
-
Endogenous apurinic/apyrimidinic sites in genomic DNA of mammalian tissues
-
Nakamura, J. and Swenberg, J. A. (1999) Endogenous apurinic/apyrimidinic sites in genomic DNA of mammalian tissues Cancer Res. 59, 2522-2526
-
(1999)
Cancer Res.
, vol.59
, pp. 2522-2526
-
-
Nakamura, J.1
Swenberg, J.A.2
-
4
-
-
0345448125
-
Repair of abasic sites in DNA
-
Dianov, G. L., Sleeth, K. M., Dianova, II, and Allinson, S. L. (2003) Repair of abasic sites in DNA Mutat. Res. 531, 157-163
-
(2003)
Mutat. Res.
, vol.531
, pp. 157-163
-
-
Dianov, G.L.1
Sleeth, K.M.2
Dianova, I.I.3
Allinson, S.L.4
-
5
-
-
0034113805
-
Suppression of spontaneous mutagenesis in human cells by DNA base excision-repair
-
Lindahl, T. (2000) Suppression of spontaneous mutagenesis in human cells by DNA base excision-repair Mutat. Res. 462, 129-135
-
(2000)
Mutat. Res.
, vol.462
, pp. 129-135
-
-
Lindahl, T.1
-
7
-
-
27844501168
-
Molecular and biological roles of Ape1 protein in mammalian base excision repair
-
Demple, B. and Sung, J. S. (2005) Molecular and biological roles of Ape1 protein in mammalian base excision repair DNA Repair 4, 1442-1449
-
(2005)
DNA Repair
, vol.4
, pp. 1442-1449
-
-
Demple, B.1
Sung, J.S.2
-
8
-
-
0034719372
-
DNA-bound structures and mutants reveal abasic DNA binding by APE1 and DNA repair coordination
-
Mol, C. D., Izumi, T., Mitra, S., and Tainer, J. A. (2000) DNA-bound structures and mutants reveal abasic DNA binding by APE1 and DNA repair coordination Nature 403, 451-456
-
(2000)
Nature
, vol.403
, pp. 451-456
-
-
Mol, C.D.1
Izumi, T.2
Mitra, S.3
Tainer, J.A.4
-
9
-
-
0035837587
-
The major human abasic endonuclease: Formation, consequences and repair of abasic lesions in DNA
-
Wilson, D. M., III and Barsky, D. (2001) The major human abasic endonuclease: formation, consequences and repair of abasic lesions in DNA Mutat. Res. 485, 283-307
-
(2001)
Mutat. Res.
, vol.485
, pp. 283-307
-
-
Barsky, D.1
-
10
-
-
15944381621
-
Protein-protein interactions and posttranslational modifications in mammalian base excision repair
-
Fan, J. and Wilson, D. M., III (2005) Protein-protein interactions and posttranslational modifications in mammalian base excision repair Free Radical Biol. Med. 38, 1121-1138
-
(2005)
Free Radical Biol. Med.
, vol.38
, pp. 1121-1138
-
-
Fan, J.1
-
11
-
-
0037049975
-
Alternative nucleotide incision repair pathway for oxidative DNA damage
-
Ischenko, A. A. and Saparbaev, M. K. (2002) Alternative nucleotide incision repair pathway for oxidative DNA damage Nature 415, 183-187
-
(2002)
Nature
, vol.415
, pp. 183-187
-
-
Ischenko, A.A.1
Saparbaev, M.K.2
-
12
-
-
0025077481
-
Redox regulation of fos and jun DNA-binding activity in vitro
-
Abate, C., Patel, L., Rauscher, F. J., III, and Curran, T. (1990) Redox regulation of fos and jun DNA-binding activity in vitro Science 249, 1157-1161
-
(1990)
Science
, vol.249
, pp. 1157-1161
-
-
Abate, C.1
Patel, L.2
Curran, T.3
-
13
-
-
0033570048
-
Ref-1 regulates the transactivation and pro-apoptotic functions of p53 in vivo
-
Gaiddon, C., Moorthy, N. C., and Prives, C. (1999) Ref-1 regulates the transactivation and pro-apoptotic functions of p53 in vivo EMBO J. 18, 5609-5621
-
(1999)
EMBO J.
, vol.18
, pp. 5609-5621
-
-
Gaiddon, C.1
Moorthy, N.C.2
Prives, C.3
-
14
-
-
0026583944
-
Identification and characterization of Ref-1, a nuclear protein that facilitates AP-1 DNA-binding activity
-
Xanthoudakis, S. and Curran, T. (1992) Identification and characterization of Ref-1, a nuclear protein that facilitates AP-1 DNA-binding activity EMBO J. 11, 653-665
-
(1992)
EMBO J.
, vol.11
, pp. 653-665
-
-
Xanthoudakis, S.1
Curran, T.2
-
15
-
-
0026714672
-
Redox activation of Fos-Jun DNA binding activity is mediated by a DNA repair enzyme
-
Xanthoudakis, S., Miao, G., Wang, F., Pan, Y. C., and Curran, T. (1992) Redox activation of Fos-Jun DNA binding activity is mediated by a DNA repair enzyme EMBO J. 11, 3323-3335
-
(1992)
EMBO J.
, vol.11
, pp. 3323-3335
-
-
Xanthoudakis, S.1
Miao, G.2
Wang, F.3
Pan, Y.C.4
Curran, T.5
-
16
-
-
0029829265
-
The redox/DNA repair protein, Ref-1, is essential for early embryonic development in mice
-
Xanthoudakis, S., Smeyne, R. J., Wallace, J. D., and Curran, T. (1996) The redox/DNA repair protein, Ref-1, is essential for early embryonic development in mice Proc. Natl Acad. Sci. U.S.A. 93, 8919-8923
-
(1996)
Proc. Natl Acad. Sci. U.S.A.
, vol.93
, pp. 8919-8923
-
-
Xanthoudakis, S.1
Smeyne, R.J.2
Wallace, J.D.3
Curran, T.4
-
17
-
-
33845229846
-
DNA repair protein involved in heart and blood development
-
Wang, Y., Shupenko, C. C., Melo, L. F., and Strauss, P. R. (2006) DNA repair protein involved in heart and blood development Mol. Cell. Biol. 26, 9083-9093
-
(2006)
Mol. Cell. Biol.
, vol.26
, pp. 9083-9093
-
-
Wang, Y.1
Shupenko, C.C.2
Melo, L.F.3
Strauss, P.R.4
-
18
-
-
0036718792
-
The apurinic/apyrimidinic endonuclease activity of Ape1/Ref-1 contributes to human glioma cell resistance to alkylating agents and is elevated by oxidative stress
-
Silber, J. R., Bobola, M. S., Blank, A., Schoeler, K. D., Haroldson, P. D., Huynh, M. B., and Kolstoe, D. D. (2002) The apurinic/apyrimidinic endonuclease activity of Ape1/Ref-1 contributes to human glioma cell resistance to alkylating agents and is elevated by oxidative stress Clin. Cancer Res. 8, 3008-3018
-
(2002)
Clin. Cancer Res.
, vol.8
, pp. 3008-3018
-
-
Silber, J.R.1
Bobola, M.S.2
Blank, A.3
Schoeler, K.D.4
Haroldson, P.D.5
Huynh, M.B.6
Kolstoe, D.D.7
-
19
-
-
2442684173
-
Blockage of abasic site repair enhances antitumor efficacy of 1,3-bis-(2-chloroethyl)-1-nitrosourea in colon tumor xenografts
-
Liu, L., Yan, L., Donze, J. R., and Gerson, S. L. (2003) Blockage of abasic site repair enhances antitumor efficacy of 1,3-bis-(2-chloroethyl)-1- nitrosourea in colon tumor xenografts Mol. Cancer Ther. 2, 1061-1066
-
(2003)
Mol. Cancer Ther.
, vol.2
, pp. 1061-1066
-
-
Liu, L.1
Yan, L.2
Donze, J.R.3
Gerson, S.L.4
-
20
-
-
33846976720
-
A dominant-negative form of the major human abasic endonuclease enhances cellular sensitivity to laboratory and clinical DNA-damaging agents
-
McNeill, D. R. and Wilson, D. M., III (2007) A dominant-negative form of the major human abasic endonuclease enhances cellular sensitivity to laboratory and clinical DNA-damaging agents Mol. Cancer Res. 5, 61-70
-
(2007)
Mol. Cancer Res.
, vol.5
, pp. 61-70
-
-
McNeill, D.R.1
-
21
-
-
0028596574
-
A role for the human DNA repair enzyme HAP1 in cellular protection against DNA damaging agents and hypoxic stress
-
Walker, L. J., Craig, R. B., Harris, A. L., and Hickson, I. D. (1994) A role for the human DNA repair enzyme HAP1 in cellular protection against DNA damaging agents and hypoxic stress Nucleic Acids Res. 22, 4884-4889
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4884-4889
-
-
Walker, L.J.1
Craig, R.B.2
Harris, A.L.3
Hickson, I.D.4
-
22
-
-
4444327784
-
Human apurinic endonuclease 1 (APE1) expression and prognostic significance in osteosarcoma: Enhanced sensitivity of osteosarcoma to DNA damaging agents using silencing RNA APE1 expression inhibition
-
Wang, D., Luo, M., and Kelley, M. R. (2004) Human apurinic endonuclease 1 (APE1) expression and prognostic significance in osteosarcoma: enhanced sensitivity of osteosarcoma to DNA damaging agents using silencing RNA APE1 expression inhibition Mol. Cancer Ther. 3, 679-686
-
(2004)
Mol. Cancer Ther.
, vol.3
, pp. 679-686
-
-
Wang, D.1
Luo, M.2
Kelley, M.R.3
-
23
-
-
0034734377
-
Abasic site recognition by two apurinic/apyrimidinic endonuclease families in DNA base excision repair: The 3′ ends justify the means
-
Mol, C. D., Hosfield, D. J., and Tainer, J. A. (2000) Abasic site recognition by two apurinic/apyrimidinic endonuclease families in DNA base excision repair: the 3′ ends justify the means Mutat. Res. 460, 211-229
-
(2000)
Mutat. Res.
, vol.460
, pp. 211-229
-
-
Mol, C.D.1
Hosfield, D.J.2
Tainer, J.A.3
-
24
-
-
0031021533
-
Substrate binding by human apurinic/apyrimidinic endonuclease indicates a Briggs-Haldane mechanism
-
Strauss, P. R., Beard, W. A., Patterson, T. A., and Wilson, S. H. (1997) Substrate binding by human apurinic/apyrimidinic endonuclease indicates a Briggs-Haldane mechanism J. Biol. Chem. 272, 1302-1307
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 1302-1307
-
-
Strauss, P.R.1
Beard, W.A.2
Patterson, T.A.3
Wilson, S.H.4
-
25
-
-
35648950472
-
Pre-steady-state kinetic characterization of the AP endonuclease activity of human AP endonuclease 1
-
Maher, R. L. and Bloom, L. B. (2007) Pre-steady-state kinetic characterization of the AP endonuclease activity of human AP endonuclease 1 J. Biol. Chem. 282, 30577-30585
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 30577-30585
-
-
Maher, R.L.1
Bloom, L.B.2
-
26
-
-
37049247536
-
Rapid Mixing and Sampling Techniques
-
Chance, B., Gibson, Q. H., Eisenhardt, R. H., and Lonberg-Holm, K. K. (1964) Rapid Mixing and Sampling Techniques Science 146, 1697-1699
-
(1964)
Science
, vol.146
, pp. 1697-1699
-
-
Chance, B.1
Gibson, Q.H.2
Eisenhardt, R.H.3
Lonberg-Holm, K.K.4
-
27
-
-
0031933081
-
Advances in transient-state kinetics
-
Johnson, K. A. (1998) Advances in transient-state kinetics Curr. Opin. Biotechnol. 9, 87-89
-
(1998)
Curr. Opin. Biotechnol.
, vol.9
, pp. 87-89
-
-
Johnson, K.A.1
-
28
-
-
0030979205
-
Beyond enzyme kinetics: Direct determination of mechanisms by stopped-flow mass spectrometry
-
Northrop, D. B. and Simpson, F. B. (1997) Beyond enzyme kinetics: direct determination of mechanisms by stopped-flow mass spectrometry Bioorg. Med. Chem. 5, 641-644
-
(1997)
Bioorg. Med. Chem.
, vol.5
, pp. 641-644
-
-
Northrop, D.B.1
Simpson, F.B.2
-
29
-
-
13444306219
-
Kinetic mechanism of rat polymerase beta-dsDNA interactions. Fluorescence stopped-flow analysis of the cooperative ligand binding to a two-site one-dimensional lattice
-
Galletto, R., Jezewska, M. J., and Bujalowski, W. (2005) Kinetic mechanism of rat polymerase beta-dsDNA interactions. Fluorescence stopped-flow analysis of the cooperative ligand binding to a two-site one-dimensional lattice Biochemistry 44, 1251-1267
-
(2005)
Biochemistry
, vol.44
, pp. 1251-1267
-
-
Galletto, R.1
Jezewska, M.J.2
Bujalowski, W.3
-
30
-
-
0037022175
-
Stopped-flow kinetic studies of the interaction between Escherichia coli Fpg protein and DNA substrates
-
Fedorova, O. S., Nevinsky, G. A., Koval, V. V., Ishchenko, A. A., Vasilenko, N. L., and Douglas, K. T. (2002) Stopped-flow kinetic studies of the interaction between Escherichia coli Fpg protein and DNA substrates Biochemistry 41, 1520-1528
-
(2002)
Biochemistry
, vol.41
, pp. 1520-1528
-
-
Fedorova, O.S.1
Nevinsky, G.A.2
Koval, V.V.3
Ishchenko, A.A.4
Vasilenko, N.L.5
Douglas, K.T.6
-
31
-
-
2342487278
-
Pre-steady-state kinetics shows differences in processing of various DNA lesions by Escherichia coli formamidopyrimidine-DNA glycosylase
-
Koval, V. V., Kuznetsov, N. A., Zharkov, D. O., Ishchenko, A. A., Douglas, K. T., Nevinsky, G. A., and Fedorova, O. S. (2004) Pre-steady-state kinetics shows differences in processing of various DNA lesions by Escherichia coli formamidopyrimidine-DNA glycosylase Nucleic Acids Res. 32, 926-935
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 926-935
-
-
Koval, V.V.1
Kuznetsov, N.A.2
Zharkov, D.O.3
Ishchenko, A.A.4
Douglas, K.T.5
Nevinsky, G.A.6
Fedorova, O.S.7
-
32
-
-
33846223901
-
Pre-steady-state kinetic study of substrate specificity of Escherichia coli formamidopyrimidine - DNA glycosylase
-
Kuznetsov, N. A., Koval, V. V., Zharkov, D. O., Vorobjev, Y. N., Nevinsky, G. A., Douglas, K. T., and Fedorova, O. S. (2007) Pre-steady-state kinetic study of substrate specificity of Escherichia coli formamidopyrimidine - DNA glycosylase Biochemistry 46, 424-435
-
(2007)
Biochemistry
, vol.46
, pp. 424-435
-
-
Kuznetsov, N.A.1
Koval, V.V.2
Zharkov, D.O.3
Vorobjev, Y.N.4
Nevinsky, G.A.5
Douglas, K.T.6
Fedorova, O.S.7
-
33
-
-
22444442634
-
Kinetics of substrate recognition and cleavage by human 8-oxoguanine-DNA glycosylase
-
Kuznetsov, N. A., Koval, V. V., Zharkov, D. O., Nevinsky, G. A., Douglas, K. T., and Fedorova, O. S. (2005) Kinetics of substrate recognition and cleavage by human 8-oxoguanine-DNA glycosylase Nucleic Acids Res. 33, 3919-3931
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 3919-3931
-
-
Kuznetsov, N.A.1
Koval, V.V.2
Zharkov, D.O.3
Nevinsky, G.A.4
Douglas, K.T.5
Fedorova, O.S.6
-
34
-
-
33847718732
-
Kinetic conformational analysis of human 8-oxoguanine-DNA glycosylase
-
Kuznetsov, N. A., Koval, V. V., Nevinsky, G. A., Douglas, K. T., Zharkov, D. O., and Fedorova, O. S. (2007) Kinetic conformational analysis of human 8-oxoguanine-DNA glycosylase J. Biol. Chem. 282, 1029-1038
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 1029-1038
-
-
Kuznetsov, N.A.1
Koval, V.V.2
Nevinsky, G.A.3
Douglas, K.T.4
Zharkov, D.O.5
Fedorova, O.S.6
-
35
-
-
0035815108
-
Two divalent metal ions in the active site of a new crystal form of human apurinic/apyrimidinic endonuclease, Ape1: Implications for the catalytic mechanism
-
Beernink, P. T., Segelke, B. W., Hadi, M. Z., Erzberger, J. P., Wilson, D. M., III, and Rupp, B. (2001) Two divalent metal ions in the active site of a new crystal form of human apurinic/apyrimidinic endonuclease, Ape1: implications for the catalytic mechanism J. Mol. Biol. 307, 1023-1034
-
(2001)
J. Mol. Biol.
, vol.307
, pp. 1023-1034
-
-
Beernink, P.T.1
Segelke, B.W.2
Hadi, M.Z.3
Erzberger, J.P.4
Rupp, B.5
-
36
-
-
66949137867
-
Conformational dynamics of human AP endonuclease in base excision and nucleotide incision repair pathways
-
Timofeyeva, N. A., Koval, V. V., Knorre, D. G., Zharkov, D. O., Saparbaev, M. K., Ishchenko, A. A., and Fedorova, O. S. (2009) Conformational dynamics of human AP endonuclease in base excision and nucleotide incision repair pathways J. Biomol. Struct. Dyn. 26, 637-652
-
(2009)
J. Biomol. Struct. Dyn.
, vol.26
, pp. 637-652
-
-
Timofeyeva, N.A.1
Koval, V.V.2
Knorre, D.G.3
Zharkov, D.O.4
Saparbaev, M.K.5
Ishchenko, A.A.6
Fedorova, O.S.7
-
37
-
-
0034607548
-
Mapping the protein-DNA interface and the metal-binding site of the major human apurinic/apyrimidinic endonuclease
-
Nguyen, L. H., Barsky, D., Erzberger, J. P., and Wilson, D. M., III (2000) Mapping the protein-DNA interface and the metal-binding site of the major human apurinic/apyrimidinic endonuclease J. Mol. Biol. 298, 447-459
-
(2000)
J. Mol. Biol.
, vol.298
, pp. 447-459
-
-
Nguyen, L.H.1
Barsky, D.2
Erzberger, J.P.3
-
38
-
-
33847258902
-
Role of active site tyrosines in dynamic aspects of DNA binding by AP endonuclease
-
Melo, L. F., Mundle, S. T., Fattal, M. H., O'Regan, N. E., and Strauss, P. R. (2007) Role of active site tyrosines in dynamic aspects of DNA binding by AP endonuclease DNA Repair 6, 374-382
-
(2007)
DNA Repair
, vol.6
, pp. 374-382
-
-
Melo, L.F.1
Mundle, S.T.2
Fattal, M.H.3
O'regan, N.E.4
Strauss, P.R.5
-
39
-
-
4544362837
-
Novel role of tyrosine in catalysis by human AP endonuclease 1
-
Mundle, S. T., Fattal, M. H., Melo, L. F., Coriolan, J. D., O'Regan, N. E., and Strauss, P. R. (2004) Novel role of tyrosine in catalysis by human AP endonuclease 1 DNA Repair 3, 1447-1455
-
(2004)
DNA Repair
, vol.3
, pp. 1447-1455
-
-
Mundle, S.T.1
Fattal, M.H.2
Melo, L.F.3
Coriolan, J.D.4
O'regan, N.E.5
Strauss, P.R.6
-
40
-
-
58549101715
-
Enzymatic mechanism of human apurinic/apyrimidinic endonuclease against a THF AP site model substrate
-
Mundle, S. T., Delaney, J. C., Essigmann, J. M., and Strauss, P. R. (2009) Enzymatic mechanism of human apurinic/apyrimidinic endonuclease against a THF AP site model substrate Biochemistry 48, 19-26
-
(2009)
Biochemistry
, vol.48
, pp. 19-26
-
-
Mundle, S.T.1
Delaney, J.C.2
Essigmann, J.M.3
Strauss, P.R.4
-
41
-
-
0035881038
-
Solution structure of an oligonucleotide containing an abasic site: Evidence for an unusual deoxyribose conformation
-
Hoehn, S. T., Turner, C. J., and Stubbe, J. (2001) Solution structure of an oligonucleotide containing an abasic site: evidence for an unusual deoxyribose conformation Nucleic Acids Res. 29, 3413-3423
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 3413-3423
-
-
Hoehn, S.T.1
Turner, C.J.2
Stubbe, J.3
-
42
-
-
0001550068
-
Predicting DNA duplex stability from the base sequence
-
Breslauer, K. J., Frank, R., Blocker, H., and Marky, L. A. (1986) Predicting DNA duplex stability from the base sequence Proc. Natl. Acad. Sci. U.S.A. 83, 3746-3750
-
(1986)
Proc. Natl. Acad. Sci. U.S.A.
, vol.83
, pp. 3746-3750
-
-
Breslauer, K.J.1
Frank, R.2
Blocker, H.3
Marky, L.A.4
-
43
-
-
0029859713
-
Improved thermodynamic parameters and helix initiation factor to predict stability of DNA duplexes
-
Sugimoto, N., Nakano, S., Yoneyama, M., and Honda, K. (1996) Improved thermodynamic parameters and helix initiation factor to predict stability of DNA duplexes Nucleic Acids Res. 24, 4501-4505
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 4501-4505
-
-
Sugimoto, N.1
Nakano, S.2
Yoneyama, M.3
Honda, K.4
-
44
-
-
0032546530
-
Thermodynamic consequences of an abasic lesion in duplex DNA are strongly dependent on base sequence
-
Gelfand, C. A., Plum, G. E., Grollman, A. P., Johnson, F., and Breslauer, K. J. (1998) Thermodynamic consequences of an abasic lesion in duplex DNA are strongly dependent on base sequence Biochemistry 37, 7321-7327
-
(1998)
Biochemistry
, vol.37
, pp. 7321-7327
-
-
Gelfand, C.A.1
Plum, G.E.2
Grollman, A.P.3
Johnson, F.4
Breslauer, K.J.5
-
45
-
-
0029902679
-
Program DYNAFIT for the analysis of enzyme kinetic data: Application to HIV proteinase
-
Kuzmic, P. (1996) Program DYNAFIT for the analysis of enzyme kinetic data: application to HIV proteinase Anal. Biochem. 237, 260-273
-
(1996)
Anal. Biochem.
, vol.237
, pp. 260-273
-
-
Kuzmic, P.1
-
47
-
-
0029001186
-
Incision activity of human apurinic endonuclease (Ape) at abasic site analogs in DNA
-
Wilson, D. M., III, Takeshita, M., Grollman, A. P., and Demple, B. (1995) Incision activity of human apurinic endonuclease (Ape) at abasic site analogs in DNA J. Biol. Chem. 270, 16002-16007
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 16002-16007
-
-
Takeshita, M.1
Grollman, A.P.2
Demple, B.3
-
48
-
-
77951895418
-
Probing conformational changes in Ape1 during the progression of base excision repair
-
Yu, E., Gaucher, S. P., and Hadi, M. Z. (2010) Probing conformational changes in Ape1 during the progression of base excision repair Biochemistry 49, 3786-3796
-
(2010)
Biochemistry
, vol.49
, pp. 3786-3796
-
-
Yu, E.1
Gaucher, S.P.2
Hadi, M.Z.3
-
49
-
-
0023664684
-
Oligodeoxynucleotides containing synthetic abasic sites. Model substrates for DNA polymerases and apurinic/apyrimidinic endonucleases
-
Takeshita, M., Chang, C. N., Johnson, F., Will, S., and Grollman, A. P. (1987) Oligodeoxynucleotides containing synthetic abasic sites. Model substrates for DNA polymerases and apurinic/apyrimidinic endonucleases J. Biol. Chem. 262, 10171-10179
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 10171-10179
-
-
Takeshita, M.1
Chang, C.N.2
Johnson, F.3
Will, S.4
Grollman, A.P.5
-
50
-
-
0035969981
-
Conformation and dynamics of abasic sites in DNA investigated by time-resolved fluorescence of 2-aminopurine
-
Rachofsky, E. L., Seibert, E., Stivers, J. T., Osman, R., and Ross, J. B. (2001) Conformation and dynamics of abasic sites in DNA investigated by time-resolved fluorescence of 2-aminopurine Biochemistry 40, 957-967
-
(2001)
Biochemistry
, vol.40
, pp. 957-967
-
-
Rachofsky, E.L.1
Seibert, E.2
Stivers, J.T.3
Osman, R.4
Ross, J.B.5
-
51
-
-
43049167396
-
Characterization of abasic endonuclease activity of human Ape1 on alternative substrates, as well as effects of ATP and sequence context on AP site incision
-
Berquist, B. R., McNeill, D. R., and Wilson, D. M., III (2008) Characterization of abasic endonuclease activity of human Ape1 on alternative substrates, as well as effects of ATP and sequence context on AP site incision J. Mol. Biol. 379, 17-27
-
(2008)
J. Mol. Biol.
, vol.379
, pp. 17-27
-
-
Berquist, B.R.1
McNeill, D.R.2
-
52
-
-
0014030247
-
Allosteric enzyme models and their analysis by the theory of graphs
-
Volkenstein, M. V. and Goldstein, B. N. (1966) Allosteric enzyme models and their analysis by the theory of graphs Biochim. Biophys. Acta 115, 478-485
-
(1966)
Biochim. Biophys. Acta
, vol.115
, pp. 478-485
-
-
Volkenstein, M.V.1
Goldstein, B.N.2
-
53
-
-
34249905486
-
A "moving metal mechanism" for substrate cleavage by the DNA repair endonuclease APE-1
-
Oezguen, N., Schein, C. H., Peddi, S. R., Power, T. D., Izumi, T., and Braun, W. (2007) A "moving metal mechanism" for substrate cleavage by the DNA repair endonuclease APE-1 Proteins 68, 313-323
-
(2007)
Proteins
, vol.68
, pp. 313-323
-
-
Oezguen, N.1
Schein, C.H.2
Peddi, S.R.3
Power, T.D.4
Izumi, T.5
Braun, W.6
-
54
-
-
0033586728
-
Single-turnover analysis of mutant human apurinic/apyrimidinic endonuclease
-
Lucas, J. A., Masuda, Y., Bennett, R. A., Strauss, N. S., and Strauss, P. R. (1999) Single-turnover analysis of mutant human apurinic/apyrimidinic endonuclease Biochemistry 38, 4958-4964
-
(1999)
Biochemistry
, vol.38
, pp. 4958-4964
-
-
Lucas, J.A.1
Masuda, Y.2
Bennett, R.A.3
Strauss, N.S.4
Strauss, P.R.5
-
55
-
-
33645533295
-
Role of the tryptophan residue in the vicinity of the catalytic center of exonuclease III family AP endonucleases: AP site recognition mechanism
-
Kaneda, K., Sekiguchi, J., and Shida, T. (2006) Role of the tryptophan residue in the vicinity of the catalytic center of exonuclease III family AP endonucleases: AP site recognition mechanism Nucleic Acids Res. 34, 1552-1563
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 1552-1563
-
-
Kaneda, K.1
Sekiguchi, J.2
Shida, T.3
-
56
-
-
0033538343
-
The role of Mg2+ and specific amino acid residues in the catalytic reaction of the major human abasic endonuclease: New insights from EDTA-resistant incision of acyclic abasic site analogs and site-directed mutagenesis
-
Erzberger, J. P. and Wilson, D. M., III (1999) The role of Mg2+ and specific amino acid residues in the catalytic reaction of the major human abasic endonuclease: new insights from EDTA-resistant incision of acyclic abasic site analogs and site-directed mutagenesis J. Mol. Biol. 290, 447-457
-
(1999)
J. Mol. Biol.
, vol.290
, pp. 447-457
-
-
Erzberger, J.P.1
|