메뉴 건너뛰기




Volumn 84, Issue 16, 2010, Pages 8219-8230

Multiple ASF/SF2 sites in the human papillomavirus type 16 (HPV-16) E4-coding region promote splicing to the most commonly used 3′-splice site on the HPV-16 genome

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; PROTEIN ASF; PROTEIN E4; PROTEIN E6; PROTEIN E7; PROTEIN SF2; UNCLASSIFIED DRUG; VIRUS PROTEIN;

EID: 77954989177     PISSN: 0022538X     EISSN: 10985514     Source Type: Journal    
DOI: 10.1128/JVI.00462-10     Document Type: Article
Times cited : (42)

References (37)
  • 1
    • 0012899213 scopus 로고    scopus 로고
    • Maps of papillomavirus mRNA transcripts
    • S. R. Billakanti, C. E. Calef, A. D. Farmer, A. L. Halpern, and G. L. Myers (ed.), Los Alamos National Laboratory, Los Alamos, NM
    • Baker, C., and C. Calef. 1997. Maps of papillomavirus mRNA transcripts. In S. R. Billakanti, C. E. Calef, A. D. Farmer, A. L. Halpern, and G. L. Myers (ed.), Human papillomaviruses: a compilation and analysis of nucleic acid and amino acid sequences. Los Alamos National Laboratory, Los Alamos, NM.
    • (1997) Human Papillomaviruses: A Compilation and Analysis of Nucleic Acid and Amino Acid Sequences
    • Baker, C.1    Calef, C.2
  • 2
    • 0026582451 scopus 로고
    • Nucleotide 880 splice donor site required for efficient transformation and RNA accumulation by human papillomavirus type 16 E7 gene
    • Belaguli, N. S., M. M. Pater, and A. Pater. 1992. Nucleotide 880 splice donor site required for efficient transformation and RNA accumulation by human papillomavirus type 16 E7 gene. J. Virol. 66:2724-2730.
    • (1992) J. Virol. , vol.66 , pp. 2724-2730
    • Belaguli, N.S.1    Pater, M.M.2    Pater, A.3
  • 3
    • 2642577338 scopus 로고    scopus 로고
    • A bidirectional SF2/ASF- and SRp40-dependent splicing enhancer regulates human immunodeficiency virus type 1 rev, env, vpu, and nef gene expression
    • Caputi, M., M. Freund, S. Kammler, C. Asang, and H. Schaal. 2004. A bidirectional SF2/ASF- and SRp40-dependent splicing enhancer regulates human immunodeficiency virus type 1 rev, env, vpu, and nef gene expression. J. Virol. 78:6517-6526.
    • (2004) J. Virol. , vol.78 , pp. 6517-6526
    • Caputi, M.1    Freund, M.2    Kammler, S.3    Asang, C.4    Schaal, H.5
  • 4
    • 0042242582 scopus 로고    scopus 로고
    • ESEfinder: A web resource to identify exonic splicing enhancers
    • Cartegni, L., J. Wang, Z. Zhu, M. Q. Zhang, and A. R. Krainer. 2003. ESEfinder: a web resource to identify exonic splicing enhancers. Nucleic Acids Res. 31:3568-3571.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3568-3571
    • Cartegni, L.1    Wang, J.2    Zhu, Z.3    Zhang, M.Q.4    Krainer, A.R.5
  • 5
    • 0023224637 scopus 로고
    • Human papillomavirus types 6 and 11 mRNAs from genital condylomata acuminata
    • Chow, L. T., M. Nasseri, S. M. Wolinsky, and T. R. Broker. 1987. Human papillomavirus types 6 and 11 mRNAs from genital condylomata acuminata. J. Virol. 61:2581-2588.
    • (1987) J. Virol. , vol.61 , pp. 2581-2588
    • Chow, L.T.1    Nasseri, M.2    Wolinsky, S.M.3    Broker, T.R.4
  • 6
    • 0025148460 scopus 로고
    • Detection of novel splicing patterns in a HPV16-containing keratinocyte cell line
    • Doorbar, J., A. Parton, K. Hartley, L. Banks, T. Crook, M. Stanley, and L. Crawford. 1990. Detection of novel splicing patterns in a HPV16-containing keratinocyte cell line. Virology 178:254-262.
    • (1990) Virology , vol.178 , pp. 254-262
    • Doorbar, J.1    Parton, A.2    Hartley, K.3    Banks, L.4    Crook, T.5    Stanley, M.6    Crawford, L.7
  • 7
    • 65649117294 scopus 로고    scopus 로고
    • Increased expression of cellular RNA-binding proteins in HPV-induced neoplasia and cervical cancer
    • Fay, J., P. Kelehan, H. Lambkin, and S. Schwartz. 2009. Increased expression of cellular RNA-binding proteins in HPV-induced neoplasia and cervical cancer. J. Med. Virol. 81:897-907.
    • (2009) J. Med. Virol. , vol.81 , pp. 897-907
    • Fay, J.1    Kelehan, P.2    Lambkin, H.3    Schwartz, S.4
  • 8
    • 52049125935 scopus 로고    scopus 로고
    • Papillomavirus 3′ UTR regulatory elements
    • Graham, S. V. 2008. Papillomavirus 3′ UTR regulatory elements. Front. Biosci. 13:5646-5663.
    • (2008) Front. Biosci. , vol.13 , pp. 5646-5663
    • Graham, S.V.1
  • 9
    • 0029869006 scopus 로고    scopus 로고
    • Identification of a differentiation-inducible promoter in the E7 open reading frame of human papillomavirus type 16 (HPV-16) in raft cultures of a new cell line containing high copy numbers of episomal HPV-16 DNA
    • Grassmann, K., B. Rapp, H. Maschek, K. U. Petry, and T. Iftner. 1996. Identification of a differentiation-inducible promoter in the E7 open reading frame of human papillomavirus type 16 (HPV-16) in raft cultures of a new cell line containing high copy numbers of episomal HPV-16 DNA. J. Virol. 70:2339-2349.
    • (1996) J. Virol. , vol.70 , pp. 2339-2349
    • Grassmann, K.1    Rapp, B.2    Maschek, H.3    Petry, K.U.4    Iftner, T.5
  • 10
    • 0001414735 scopus 로고    scopus 로고
    • Papillomaviridae and their replication
    • Knipe, D. M., P. M. Howley, D. E. Griffin, R. A. Lamb, M. A. Martin, B. Roizman, and S. E. Straus (ed.), 4th ed., Lippincott Williams & Wilkins, Philadelphia, PA
    • Howley, P. M., and D. R. Lowy. 2001. Papillomaviridae and their replication, p. 2197-2229. In Knipe, D. M., P. M. Howley, D. E. Griffin, R. A. Lamb, M. A. Martin, B. Roizman, and S. E. Straus (ed.), Fields virology, 4th ed., vol. 2. Lippincott Williams & Wilkins, Philadelphia, PA.
    • (2001) Fields Virology , vol.2 , pp. 2197-2229
    • Howley, P.M.1    Lowy, D.R.2
  • 11
    • 0026671624 scopus 로고
    • Differentiation-induced and constitutive transcription of human papillomavirus type 31b in cell lines containing viral episomes
    • Hummel, M., J. B. Hudson, and L. A. Laimins. 1992. Differentiation- induced and constitutive transcription of human papillomavirus type 31b in cell lines containing viral episomes. J. Virol. 66:6070-6080.
    • (1992) J. Virol. , vol.66 , pp. 6070-6080
    • Hummel, M.1    Hudson, J.B.2    Laimins, L.A.3
  • 12
    • 0029069859 scopus 로고
    • Human papillomavirus type 31b late gene expression is regulated through protein kinase C-mediated changes in RNA processing
    • Hummel, M., H. B. Lim, and L. A. Laimins. 1995. Human papillomavirus type 31b late gene expression is regulated through protein kinase C-mediated changes in RNA processing. J. Virol. 69:3381-3388.
    • (1995) J. Virol. , vol.69 , pp. 3381-3388
    • Hummel, M.1    Lim, H.B.2    Laimins, L.A.3
  • 13
    • 24044454331 scopus 로고    scopus 로고
    • Impact of the interaction between adenovirus E1A and CtBP on host cell gene expression
    • Johansson, C., H. Zhao, E. Bajak, F. Granberg, U. Pettersson, and C. Svensson. 2005. Impact of the interaction between adenovirus E1A and CtBP on host cell gene expression. Virus Res. 113:51-63.
    • (2005) Virus Res. , vol.113 , pp. 51-63
    • Johansson, C.1    Zhao, H.2    Bajak, E.3    Granberg, F.4    Pettersson, U.5    Svensson, C.6
  • 15
    • 0030819089 scopus 로고    scopus 로고
    • Differential effects of the splice acceptor at nucleotide 3295 of human papillomavirus 31 on stable and transient viral replication
    • Klumpp, D., F. Stubenrauch, and L. A. Laimins. 1997. Differential effects of the splice acceptor at nucleotide 3295 of human papillomavirus 31 on stable and transient viral replication. J. Virol. 71:8186-8194.
    • (1997) J. Virol. , vol.71 , pp. 8186-8194
    • Klumpp, D.1    Stubenrauch, F.2    Laimins, L.A.3
  • 16
    • 2942618208 scopus 로고    scopus 로고
    • Pathogenesis of human papillomaviruses in differentiating epithelia
    • Longworth, M. S., and L. A. Laimins. 2004. Pathogenesis of human papillomaviruses in differentiating epithelia. Microbiol. Mol. Biol. Rev. 68:362-372.
    • (2004) Microbiol. Mol. Biol. Rev. , vol.68 , pp. 362-372
    • Longworth, M.S.1    Laimins, L.A.2
  • 17
    • 33847350903 scopus 로고    scopus 로고
    • Analysis of novel human papillomavirus type 16 late mRNAs in differentiated W12 cervical epithelial cells
    • Milligan, S. G., T. Veerapraditsin, B. Ahamet, S. Mole, and S. V. Graham. 2007. Analysis of novel human papillomavirus type 16 late mRNAs in differentiated W12 cervical epithelial cells. Virology 360:172-181.
    • (2007) Virology , vol.360 , pp. 172-181
    • Milligan, S.G.1    Veerapraditsin, T.2    Ahamet, B.3    Mole, S.4    Graham, S.V.5
  • 19
    • 58149378393 scopus 로고    scopus 로고
    • Human papillomavirus type 16 E2 protein transcriptionally activates the promoter of a key cellular splicing factor, SF2/ASF
    • Mole, S., S. G. Milligan, and S. V. Graham. 2009. Human papillomavirus type 16 E2 protein transcriptionally activates the promoter of a key cellular splicing factor, SF2/ASF. J. Virol. 83:357-367.
    • (2009) J. Virol. , vol.83 , pp. 357-367
    • Mole, S.1    Milligan, S.G.2    Graham, S.V.3
  • 20
    • 0023242005 scopus 로고
    • A human papillomavirus type 11 transcript encoding and E1-E4 protein
    • Nasseri, M., R. Hirochika, T. R. Broker, and L. Chow. 1987. A human papillomavirus type 11 transcript encoding and E1-E4 protein. Virology 159:433-439.
    • (1987) Virology , vol.159 , pp. 433-439
    • Nasseri, M.1    Hirochika, R.2    Broker, T.R.3    Chow, L.4
  • 21
    • 77950629888 scopus 로고    scopus 로고
    • Identification and activity of promoters in the HPV genome
    • B. Norrild (ed.), Transworld Research Network, Trivandrum, India
    • Norrild, B., C. H. Hansen, and J. A. Glahder. 2007. Identification and activity of promoters in the HPV genome, p. 1-26. In B. Norrild (ed.), Human papillomavirus gene regulation and transformation. Transworld Research Network, Trivandrum, India.
    • (2007) Human Papillomavirus Gene Regulation and Transformation , pp. 1-26
    • Norrild, B.1    Hansen, C.H.2    Glahder, J.A.3
  • 22
    • 0030959260 scopus 로고    scopus 로고
    • Characterization of late gene transcripts expressed during vegetative replication of human papillomavirus type 31b
    • Ozbun, M. A., and C. Meyers. 1997. Characterization of late gene transcripts expressed during vegetative replication of human papillomavirus type 31b. J. Virol. 71:5161-5172.
    • (1997) J. Virol. , vol.71 , pp. 5161-5172
    • Ozbun, M.A.1    Meyers, C.2
  • 23
    • 0024407710 scopus 로고
    • Characterisation of rare human papillomavirus type 11 mRNAs coding for regulatory and structural proteins, using the polymerase chain reaction
    • Rotenberg, M. O., L. T. Chow, and T. R. Broker. 1989. Characterisation of rare human papillomavirus type 11 mRNAs coding for regulatory and structural proteins, using the polymerase chain reaction. Virology 172:489-497.
    • (1989) Virology , vol.172 , pp. 489-497
    • Rotenberg, M.O.1    Chow, L.T.2    Broker, T.R.3
  • 24
    • 24644522723 scopus 로고    scopus 로고
    • A splicing enhancer in the E4 coding region of human papillomavirus type 16 is required for early mRNA splicing and polyadenylation as well as inhibition of premature late gene expression
    • Rush, M., X. Zhao, and S. Schwartz. 2005. A splicing enhancer in the E4 coding region of human papillomavirus type 16 is required for early mRNA splicing and polyadenylation as well as inhibition of premature late gene expression. J. Virol. 79:12002-12015.
    • (2005) J. Virol. , vol.79 , pp. 12002-12015
    • Rush, M.1    Zhao, X.2    Schwartz, S.3
  • 25
    • 75149186947 scopus 로고    scopus 로고
    • Diagnosing cervical cancer and high-grade precursors by HPV-16 transcription patterns
    • Schmitt, M., V. Dalstein, T. Waterboer, C. Clavel, L. Gissman, and M. Pawlita. 2010. Diagnosing cervical cancer and high-grade precursors by HPV-16 transcription patterns Cancer Res. 70:249-256.
    • (2010) Cancer Res. , vol.70 , pp. 249-256
    • Schmitt, M.1    Dalstein, V.2    Waterboer, T.3    Clavel, C.4    Gissman, L.5    Pawlita, M.6
  • 26
    • 52049104181 scopus 로고    scopus 로고
    • HPV-16 RNA processing
    • Schwartz, S. 2008. HPV-16 RNA processing. Front. Biosci. 13:5880-5891.
    • (2008) Front. Biosci. , vol.13 , pp. 5880-5891
    • Schwartz, S.1
  • 27
    • 0042552760 scopus 로고
    • Transcription of human papillomavirus type 16 early genes in a cervical cancer and a cancer-derived cell line and identification of the E7 protein
    • Smotkin, D., and F. O. Wettstein. 1986. Transcription of human papillomavirus type 16 early genes in a cervical cancer and a cancer-derived cell line and identification of the E7 protein. Proc. Natl. Acad. Sci. U. S. A. 83:4680-4684.
    • (1986) Proc. Natl. Acad. Sci. U. S. A. , vol.83 , pp. 4680-4684
    • Smotkin, D.1    Wettstein, F.O.2
  • 28
    • 0032927192 scopus 로고    scopus 로고
    • The inhibitory activity of the AU-rich RNA element in the human papillomavirus type 1 late 3′ untranslated region correlates with its affinity for the elav-like HuR protein
    • Sokolowski, M., H. Furneaux, and S. Schwartz. 1999. The inhibitory activity of the AU-rich RNA element in the human papillomavirus type 1 late 3′ untranslated region correlates with its affinity for the elav-like HuR protein. J. Virol. 73:1080-1091.
    • (1999) J. Virol. , vol.73 , pp. 1080-1091
    • Sokolowski, M.1    Furneaux, H.2    Schwartz, S.3
  • 30
    • 41149123857 scopus 로고    scopus 로고
    • PTB induces HPV-16 late gene expression by interfering with splicing inhibitory elements at the major late 5′-splice site SD3632
    • Somberg, M., X. Zhao, M. Fröhlich, M. Evander, and S. Schwartz. 2008. PTB induces HPV-16 late gene expression by interfering with splicing inhibitory elements at the major late 5′-splice site SD3632. J. Virol. 82:3665-3678.
    • (2008) J. Virol. , vol.82 , pp. 3665-3678
    • Somberg, M.1    Zhao, X.2    Fröhlich, M.3    Evander, M.4    Schwartz, S.5
  • 31
    • 0034284997 scopus 로고    scopus 로고
    • HuR, a protein implicated in oncogene and growth factor mRNA decay, binds to the 3′ ends of hepatitis C virus RNA of both polarities
    • Spångberg, K., L. Wiklund, and S. Schwartz. 2000. HuR, a protein implicated in oncogene and growth factor mRNA decay, binds to the 3′ ends of hepatitis C virus RNA of both polarities. Virology 274:378-390.
    • (2000) Virology , vol.274 , pp. 378-390
    • Spångberg, K.1    Wiklund, L.2    Schwartz, S.3
  • 32
    • 0037174853 scopus 로고    scopus 로고
    • Inhibtion of translation by UAUUUAU and UAUUUUUAU motifs of the AU-rich RNA instability in the HPV-1 late 3′ untranslated region
    • Wiklund, L., M. Sokolowski, A. Carlsson, M. Rush, and S. Schwartz. 2002. Inhibtion of translation by UAUUUAU and UAUUUUUAU motifs of the AU-rich RNA instability in the HPV-1 late 3′ untranslated region. J. Biol. Chem. 277:40462-40471.
    • (2002) J. Biol. Chem. , vol.277 , pp. 40462-40471
    • Wiklund, L.1    Sokolowski, M.2    Carlsson, A.3    Rush, M.4    Schwartz, S.5
  • 33
    • 15244354499 scopus 로고    scopus 로고
    • A 57-nucleotide upstream early polyadenylation element in human papillomavirus type 16 interacts with hFIP1, CstF-64, hnRNP C1/C2, and polypyrimidine tract binding protein
    • Zhao, X., D. Öberg, M. Rush, J. Fay, H. Lambkin, and S. Schwartz. 2005. A 57-nucleotide upstream early polyadenylation element in human papillomavirus type 16 interacts with hFIP1, CstF-64, hnRNP C1/C2, and polypyrimidine tract binding protein. J. Virol. 79:4270-4288.
    • (2005) J. Virol. , vol.79 , pp. 4270-4288
    • Zhao, X.1    Öberg, D.2    Rush, M.3    Fay, J.4    Lambkin, H.5    Schwartz, S.6
  • 34
    • 34247109992 scopus 로고    scopus 로고
    • The presence of inhibitory RNA elements in the late 3′-untranslated region is a conserved property of human papillomaviruses
    • Zhao, X., M. Rush, A. Carlsson, and S. Schwartz. 2007. The presence of inhibitory RNA elements in the late 3′-untranslated region is a conserved property of human papillomaviruses. Virus Res. 125:135-144.
    • (2007) Virus Res. , vol.125 , pp. 135-144
    • Zhao, X.1    Rush, M.2    Carlsson, A.3    Schwartz, S.4
  • 35
    • 4644304868 scopus 로고    scopus 로고
    • Identification of an hnRNP A1-dependent splicing silencer in the human papillomavirus type 16 L1 coding region that prevents premature expression of the late L1 gene
    • Zhao, X., M. Rush, and S. Schwartz. 2004. Identification of an hnRNP A1-dependent splicing silencer in the human papillomavirus type 16 L1 coding region that prevents premature expression of the late L1 gene. J. Virol. 78:10888-10905.
    • (2004) J. Virol. , vol.78 , pp. 10888-10905
    • Zhao, X.1    Rush, M.2    Schwartz, S.3
  • 36
    • 33744756020 scopus 로고    scopus 로고
    • Papillomavirus genome structure, expression, and posttranscriptional regulation
    • Zheng, Z. M., and C. C. Baker. 2006. Papillomavirus genome structure, expression, and posttranscriptional regulation. Front. Biosci. 11:2286-2302.
    • (2006) Front. Biosci. , vol.11 , pp. 2286-2302
    • Zheng, Z.M.1    Baker, C.C.2
  • 37
    • 0036559896 scopus 로고    scopus 로고
    • Papillomaviruses and cancer: From basic studies to clinical application
    • zur Hausen, H. 2002. Papillomaviruses and cancer: from basic studies to clinical application. Nat. Rev. Cancer 2:342-350.
    • (2002) Nat. Rev. Cancer , vol.2 , pp. 342-350
    • Zur Hausen, H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.