메뉴 건너뛰기




Volumn 20, Issue 5, 2010, Pages 853-861

Cultivation-dependent and -independent characterization of microbial community producing polyhydroxyalkanoates from raw glycerol

Author keywords

Glycerol; Microbial communities; Polyhydroxyalkanoates; Ribosomal intergenic spacer

Indexed keywords

BACTERIAL RNA; GLYCEROL; POLYHYDROXYALKANOATE SYNTHASE; POLYHYDROXYALKANOIC ACID; RNA 16S;

EID: 77954985807     PISSN: 10177825     EISSN: 17388872     Source Type: Journal    
DOI: 10.4014/jmb.0909.09038     Document Type: Article
Times cited : (26)

References (39)
  • 1
    • 0025226099 scopus 로고
    • Occurence, metabolism, metabolic role and industrial uses of bacterial polyhydroxyalkanoates
    • Anderson, A. J. and E. A. Dawes. 1990. Occurence, metabolism, metabolic role and industrial uses of bacterial polyhydroxyalkanoates. Microbiol. Rev. 54: 450-472.
    • (1990) Microbiol Rev , vol.54 , pp. 450-472
    • Anderson, A.J.1    Dawes, E.A.2
  • 2
    • 0037275491 scopus 로고    scopus 로고
    • Continuous cultures of Clostridium acetobutylicum: Culture stability and low-grade glycerol utilizations
    • Andrade, J. C. and I. Vasconcelos. 2003. Continuous cultures of Clostridium acetobutylicum: Culture stability and low-grade glycerol utilizations. Biotechnol. Lett. 25: 121-125.
    • (2003) Biotechnol. Lett , vol.25 , pp. 121-125
    • Andrade, J.C.1    Vasconcelos, I.2
  • 3
    • 4344563172 scopus 로고    scopus 로고
    • Bacterial poly(hydroxyalkanoate) polymer production from the biodiesel co-product stream
    • Ashby, R. D., D. K. Y. Solaiman, and T. A. Foglia. 2004. Bacterial poly(hydroxyalkanoate) polymer production from the biodiesel co-product stream. J. Polym. Environ. 12: 105-112.
    • (2004) J. Polym. Environ , vol.12 , pp. 105-112
    • Ashby, R.D.1    Solaiman, D.K.Y.2    Foglia, T.A.3
  • 5
    • 0018122036 scopus 로고
    • A rapid gas chromatographic method for the determination of poly-β-hydroxybutyric acid in Microbial biomass
    • Braunegg, G., B. Sonnleitner, and R. M. Lafferty. 1978. A rapid gas chromatographic method for the determination of poly-β-hydroxybutyric acid in Microbial biomass. Eur. J. Appl. Microbiol. 6: 29-37.
    • (1978) Eur. J. Appl. Microbiol , vol.6 , pp. 29-37
    • Braunegg, G.1    Sonnleitner, B.2    Lafferty, R.M.3
  • 6
    • 49049105130 scopus 로고    scopus 로고
    • Engineering microbial consortia: A new frontier in synthetic biology
    • Brenner, K., L. You, and F. H. Arnold. 2008. Engineering microbial consortia: A new frontier in synthetic biology. Trends iotechnol. 26: 483-489.
    • (2008) Trends Iotechnol , vol.26 , pp. 483-489
    • Brenner, K.1    You, L.2    Arnold, F.H.3
  • 7
    • 33745465912 scopus 로고    scopus 로고
    • Molecular detection and diversity of medium-chain-length polyhydroxyalkanoates producing bacteria enriched from activated sludge
    • Ciesielski, S., A. Cydzik-Kwiatkowska, T. Pokoj, and E. Klimiuk. 2006. Molecular detection and diversity of medium-chain-length polyhydroxyalkanoates producing bacteria enriched from activated sludge. J. Appl. Microbiol. 101: 190-199.
    • (2006) J. Appl. Microbiol , vol.101 , pp. 190-199
    • Ciesielski, S.1    Cydzik-Kwiatkowska, A.2    Pokoj, T.3    Klimiuk, E.4
  • 8
    • 69549115114 scopus 로고    scopus 로고
    • Changes in microbial community structures during adaptation towards polyhydroxyalkanoates production
    • Ciesielski, S., E. Klimiuk, J. MoŻejko, E. Nowakowska, and T. Pokoj. 2009. Changes in microbial community structures during adaptation towards polyhydroxyalkanoates production. Pol. J. Microbiol. 58: 131-139.
    • (2009) Pol J. Microbiol , vol.58 , pp. 131-139
    • Ciesielski, S.1    Klimiuk, E.2    Mozejko, J.3    Nowakowska, E.4    Pokoj, T.5
  • 9
    • 0030024243 scopus 로고    scopus 로고
    • Sequence heterogeneities among 16S ribosomal RNA sequences, and their effect on phylogenetic analyses at the species level
    • Cilia, V., B. Lafay, and R. Christen. 1996. Sequence heterogeneities among 16S ribosomal RNA sequences, and their effect on phylogenetic analyses at the species level. Mol. Biol. Evol. 13: 451-461.
    • (1996) Mol. Biol. Evol , vol.13 , pp. 451-461
    • Cilia, V.1    Lafay, B.2    Christen, R.3
  • 10
    • 0001058550 scopus 로고
    • Determination of poly-β-hydroxybutyrate and poly-β-hydroxyvalerate in activated sludge by gas-liquid chromatography
    • Comeau, Y., K. J. Hall, and W. K. Oldham. 1988. Determination of poly-β-hydroxybutyrate and poly-β-hydroxyvalerate in activated sludge by gas-liquid chromatography. Appl. Environ. Microbiol. 54: 2325-2327.
    • (1988) Appl. Environ. Microbiol , vol.54 , pp. 2325-2327
    • Comeau, Y.1    Hall, K.J.2    Oldham, W.K.3
  • 11
    • 0036624813 scopus 로고    scopus 로고
    • Molecular community analysis of microbial diversity
    • Dahllöf, I. 2002. Molecular community analysis of microbial diversity. Curr. Opin. Biotechnol. 13: 213-217.
    • (2002) Curr. Opin. Biotechnol , vol.13 , pp. 213-217
    • Dahllöf, I.1
  • 12
    • 57349088282 scopus 로고    scopus 로고
    • Glycerol: A promising and abundant carbon source for industrial microbiology
    • da Silva, G. P., M. Mack, and J. Contiero. 2009. Glycerol: A promising and abundant carbon source for industrial microbiology. Biotechnol. Adv. 27: 30-39.
    • (2009) Biotechnol. Adv , vol.27 , pp. 30-39
    • da Silva, G.P.1    Mack, M.2    Contiero, J.3
  • 14
    • 0028956886 scopus 로고    scopus 로고
    • Identification of Acinetobacter isolates in the A. calcoaceticus-A. baumannii complex by restriction analysis of the 16S-23S rRNA intergenic-spacer sequences
    • Dolzani, L., E. Tonin, C. Lagatolla, L. Prandin, and C. Monti-Bragadin. 1996. Identification of Acinetobacter isolates in the A. calcoaceticus-A. baumannii complex by restriction analysis of the 16S-23S rRNA intergenic-spacer sequences. J. Clin. Microbiol. 33: 1108-1113.
    • (1996) J. Clin. Microbiol , vol.33 , pp. 1108-1113
    • Dolzani, L.1    Tonin, E.2    Lagatolla, C.3    Prandin, L.4    Monti-Bragadin, C.5
  • 15
    • 0032879764 scopus 로고    scopus 로고
    • Automated approach for ribosomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities
    • Fisher, M. M. and E. W. Triplett. 1999. Automated approach for ribosomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities. Appl. Environ. Microbiol. 65: 4630-4636.
    • (1999) Appl. Environ. Microbiol , vol.65 , pp. 4630-4636
    • Fisher, M.M.1    Triplett, E.W.2
  • 17
    • 0030054296 scopus 로고    scopus 로고
    • New approaches to typing and identification ofbacteria using the 16S-23S rDNA spacer region
    • Gürtler, V. and V. A. Stanisich. 1996. New approaches to typing and identification ofbacteria using the 16S-23S rDNA spacer region. Microbiology 142: 3-16.
    • (1996) Microbiology , vol.142 , pp. 3-16
    • Gürtler, V.1    Stanisich, V.A.2
  • 18
    • 19944369426 scopus 로고    scopus 로고
    • Ecological and agricultural significance of bacterial polyhydroxyalkanoates
    • Kadouri, D., E. Jurkevitch, Y. Okon, and S. Castro-Sowinski. 2005. Ecological and agricultural significance of bacterial polyhydroxyalkanoates. Crit. Rev. Microbiol. 31: 55-67.
    • (2005) Crit. Rev. Microbiol , vol.31 , pp. 55-67
    • Kadouri, D.1    Jurkevitch, E.2    Okon, Y.3    Castro-Sowinski, S.4
  • 19
    • 0038654457 scopus 로고    scopus 로고
    • Combining culture-dependent and -independent methodologies for estimation of richness of estuarine bacterioplankton consuming river in dissolved organic matter
    • Kisand, V. and J. Wikner. 2003. Combining culture-dependent and -independent methodologies for estimation of richness of estuarine bacterioplankton consuming river in dissolved organic matter. Appl. Environ. Microbiol. 69: 3607-3616.
    • (2003) Appl. Environ. Microbiol , vol.69 , pp. 3607-3616
    • Kisand, V.1    Wikner, J.2
  • 20
  • 21
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular Evolutionary Genetics Analysis software
    • Kumar, S., K. Tamura, I. B. Jakobsen, and M. Nei. 2001. MEGA2: Molecular Evolutionary Genetics Analysis software. Bioinformatics 17: 1244-1245.
    • (2001) Bioinformatics , vol.17 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.B.3    Nei, M.4
  • 22
    • 47049103410 scopus 로고    scopus 로고
    • Emticicia ginsengisoli sp. nov., a species of the family 'Flexibacteraceae' isolated from soil of a ginseng field
    • Liu, Q.-M., L. N. Ten, H.-S. Yu, F.-X. Jin, W.-T. Im, and S.-T. Lee. 2008. Emticicia ginsengisoli sp. nov., a species of the family 'Flexibacteraceae' isolated from soil of a ginseng field. Int. J. Syst. Evol. Microbiol. 58: 1100-1105.
    • (2008) Int. J. Syst. Evol. Microbiol , vol.58 , pp. 1100-1105
    • Liu, Q.-M.1    Ten, L.N.2    Yu, H.-S.3    Jin, F.-X.4    Im, W.-T.5    Lee, S.-T.6
  • 23
    • 0032846469 scopus 로고    scopus 로고
    • Identification of novel bacterial lineages as active members of microbial populations in a freshwater sediment using a rapid RNA extraction procedure and RT-PCR
    • Miskin, I. P., P. Farrimond, and I. M. Head. 1999. Identification of novel bacterial lineages as active members of microbial populations in a freshwater sediment using a rapid RNA extraction procedure and RT-PCR. Microbiology 145: 1977-1987.
    • (1999) Microbiology , vol.145 , pp. 1977-1987
    • Miskin, I.P.1    Farrimond, P.2    Head, I.M.3
  • 24
    • 33749026908 scopus 로고    scopus 로고
    • Microbial production of 1,3-propanediol by Klebsiella pneumoniae using crude glycerol from biodiesel preparations
    • Mu, Y., H. Teng, D. J. Zhang, W. Wang, and Z. L. Xiu. 2006. Microbial production of 1,3-propanediol by Klebsiella pneumoniae using crude glycerol from biodiesel preparations. Biotechnol. Lett. 28: 1755-1759.
    • (2006) Biotechnol. Lett , vol.28 , pp. 1755-1759
    • Mu, Y.1    Teng, H.2    Zhang, D.J.3    Wang, W.4    Xiu, Z.L.5
  • 25
    • 43649105041 scopus 로고    scopus 로고
    • Value added utilization of crude glycerol from biodiesel production: A survey of current research activities
    • Pachauri, N. and B. He. 2006. Value added utilization of crude glycerol from biodiesel production: A survey of current research activities. ASABE Meeting Presentation.
    • (2006) ASABE Meeting Presentation
    • Pachauri, N.1    He, B.2
  • 26
    • 0344436087 scopus 로고    scopus 로고
    • Biochemical and genetic analysis of PHA synthases and other proteins required for PHA synthesis
    • Rehm, B. H. A. and A. Steinbüchel. 2003. Biochemical and genetic analysis of PHA synthases and other proteins required for PHA synthesis. Int. J. Biol. Macromolec. 25: 3-19.
    • (2003) Int. J. Biol. Macromolec , vol.25 , pp. 3-19
    • Rehm, B.H.A.1    Steinbüchel, A.2
  • 28
    • 36048951328 scopus 로고    scopus 로고
    • A most effective method for selecting a broad range of short and medium-chain-length polyhydroxyalkanoates producing microorganisms
    • Romo, D. M. R., M. V. Grosso, N. C. M. Solano, and D. M. Castaňo. 2007. A most effective method for selecting a broad range of short and medium-chain-length polyhydroxyalkanoates producing microorganisms. Electron. J. Biotechnol. 10: 348-357.
    • (2007) Electron. J. Biotechnol , vol.10 , pp. 348-357
    • Romo, D.M.R.1    Grosso, M.V.2    Solano, N.C.M.3    Castaňo, D.M.4
  • 29
    • 33744730311 scopus 로고    scopus 로고
    • Emticicia oligotrophica gen. nov., sp. nov., a new member of the family 'Flexibacteraceae', phylum Bacteroidetes
    • Saha, P. and T. Chakrabarti. 2006. Emticicia oligotrophica gen. nov., sp. nov., a new member of the family 'Flexibacteraceae', phylum Bacteroidetes. Int. J. Syst. Evol. Microbiol. 56: 991-995.
    • (2006) Int. J. Syst. Evol. Microbiol , vol.56 , pp. 991-995
    • Saha, P.1    Chakrabarti, T.2
  • 30
    • 33846230131 scopus 로고    scopus 로고
    • Molecular biology techniques used in wastewater treatment: An overview
    • Sanz, J. L. and T. Köchling. 2007. Molecular biology techniques used in wastewater treatment: An overview. Process Biochem. 42: 119-133.
    • (2007) Process Biochem , vol.42 , pp. 119-133
    • Sanz, J.L.1    Köchling, T.2
  • 31
    • 3042710803 scopus 로고    scopus 로고
    • Optimization of polyhydroxybutyrate production by mixed cultures submitted to aerobic dynamic feeding conditions
    • Serafim, L. S., P. C. Lemos, R. Oliveira, and M. A. M. Reis. 2004. Optimization of polyhydroxybutyrate production by mixed cultures submitted to aerobic dynamic feeding conditions. Biotechnol. Bioeng. 87: 145-160.
    • (2004) Biotechnol. Bioeng , vol.87 , pp. 145-160
    • Serafim, L.S.1    Lemos, P.C.2    Oliveira, R.3    Reis, M.A.M.4
  • 33
    • 16844371599 scopus 로고    scopus 로고
    • Microbacterium oleovorans sp. nov. and Microbacterium hydrocarbonoxydans sp. nov., novel crude-oil-degrading Gram-positive bacteria
    • Schippers, A., K. Bosecker, C. Spröer, and P. Schumann. 2005. Microbacterium oleovorans sp. nov. and Microbacterium hydrocarbonoxydans sp. nov., novel crude-oil-degrading Gram-positive bacteria. Int. J. Syst. Evol. Microbiol. 55: 655-660.
    • (2005) Int. J. Syst. Evol. Microbiol , vol.55 , pp. 655-660
    • Schippers, A.1    Bosecker, K.2    Spröer, C.3    Schumann, P.4
  • 35
    • 0033936224 scopus 로고    scopus 로고
    • Rapid identification of medium-chain-length polyhydroxyalkanoate synthase gene by polymerase chain reaction
    • Solaiman, D. K. Y., R. D. Ashby, and T. A. Foglia. 2000. Rapid identification of medium-chain-length polyhydroxyalkanoate synthase gene by polymerase chain reaction. Appl. Microbiol. Biotechnol. 53: 690-694.
    • (2000) Appl. Microbiol. Biotechnol , vol.53 , pp. 690-694
    • Solaiman, D.K.Y.1    Ashby, R.D.2    Foglia, T.A.3
  • 36
    • 0028028182 scopus 로고
    • A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt, E. and B. M. Goebel. 1994. A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int. J. Syst. Bacteriol. 44: 846-849.
    • (1994) Int. J. Syst. Bacteriol , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 37
    • 0026033649 scopus 로고
    • Physiology and molecular genetics of poly (β-hydroxy-alkanoic acid) synthesis in Alcaligenes eutrophus
    • Steinbüchel, A. and H. G. Schlegel. 1991. Physiology and molecular genetics of poly (β-hydroxy-alkanoic acid) synthesis in Alcaligenes eutrophus. Mol. Microbiol. 5: 535-542.
    • (1991) Mol. Microbiol , vol.5 , pp. 535-542
    • Steinbüchel, A.1    Schlegel, H.G.2
  • 38
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 39
    • 34249936957 scopus 로고    scopus 로고
    • Anaerobic fermentation of glycerol: A path to economic viability for the biofuels industry
    • Yazdani, S. S. and R. Gonzalez. 2007. Anaerobic fermentation of glycerol: A path to economic viability for the biofuels industry. Curr. Opin. Biotechnol. 18: 213-219.
    • (2007) Curr. Opin. Biotechnol , vol.18 , pp. 213-219
    • Yazdani, S.S.1    Gonzalez, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.