Degradation and utilization of protein derived from Pseudomonas aeruginosa by marine microbial community

Journal of Oceanography

Volumn 66, Issue 4, 2010, Pages 513-521

  Obayashi, Yumiko ^a,b   Ueoka, Nahomi ^a   Suzuki, Satoru ^a  

^a EHIME UNIVERSITY   (Japan)

^b YOKOHAMA NATIONAL UNIVERSITY   (Japan)

Author keywords

Degradation of protein; Marine microbial community; Microbial loop; OprP; Protease; Pseudomonas aeruginosa

Indexed keywords

BACTERIUM; BIODEGRADATION; DETECTION METHOD; ENZYME ACTIVITY; MICROBIAL COMMUNITY; MICROBIAL LOOP; MICROBIOLOGY; MICROCOSM; PROTEIN;

BACTERIA (MICROORGANISMS); PSEUDOMONAS AERUGINOSA;

EID: 77954936450     PISSN: 09168370     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10872-010-0043-7     Document Type: Article

References (23)

1. Amon, R. M. W. and R. Benner (1994): Rapid cycling of high-molecular-weight dissolved organic matter in the ocean. Nature, 369, 549-552.
2. Arnosti, C., S. Durkin and W. H. Jeffrey (2005): Patterns of extracellular enzyme activities among pelagic marine microbial communities: implications for cycling of dissolved organic carbon. Aquat. Microb. Ecol., 38, 135-145.
3. Benner, R. and K. Kaiser (2003): Abundance of aminosugars and peptidoglycan in marine particulate and dissolved organic matter. Limnol. Oceanogr., 42, 506-518.
4. Hancock, R. E. W., V. J. Raffle and T. I. Nicas (1981): Involvement of the outer membrane in gentamicin and streptomycin uptake and killing in Pseudomonas aeruginosa. Antimicrob. Agents Chemother., 19, 777-785.
5. Hancock, R. E. W., K. Poole and R. Benz (1982): Outer membrane protein P of Pseudomonas aeruginosa: regulation by phosphate deficiency and formation of small anion-specific channels in lipid bilayer membranes. J. Bacteriol., 150, 730-738.
6. Kaiser, K. and R. Benner (2008): Major bacterial contribution to the ocean reservoir of detrital organic carbon and nitro gen. Limnol. Oceanogr., 53, 99-112.
7. Khan, N. H., Y. Ishii, N. Kimata-Kino, H. Esaki, T. Nishino, M. Nishimura and K. Kogure (2007): Isolation of Pseudomonas aeruginosa from open ocean and comparison with freshwater, clinical, and animal isolates. Microb. Ecol., 47, 41-47.
8. Kiørboe, T. and G. A. Jackson (2001): Marine snow, organic solute plumes, and optimal chemosensory behavior of bacteria. Limnol. Oceanogr., 46, 1309-1318.
9. Kiørboe, T., H. Ploug and U. H. Thygesen (2001): Fluid motion and solute distribution around sinking aggregates. I. Small-scale fluxes and heterogeneity of nutrients in the pelagic environment. Mar. Ecol. Prog. Ser., 211, 1-13.
10. McCarthy, M. D., J. I. Hedges and R. Benner (1998): Major bacterial contribution to marine dissolved organic nitrogen. Science, 281, 231-234.
11. Nagata, T., R. Fukuda, I. Koike, K. Kogure and D. L. Kirchman (1998): Degradation by bacteria of membrane and soluble protein in seawater. Aquat. Microb. Ecol., 14, 29-37.
12. Obayashi, Y. and S. Suzuki (2005): Proteolytic enzymes in coastal surface seawater: Significant activity of endopeptidases and exopeptidases. Limnol. Oceanogr., 50, 722-726.
13. Obayashi, Y. and S. Suzuki (2008): Occurrence of exo- and endopeptidases in dissolved and particulate fractions of coastal seawater. Aquat. Microb. Ecol., 50, 231-237.
14. Smith, D. C., M. Simon, A. L. Alldredge and F. Azam (1992): Intense hydrolytic enzyme-activity on marine aggregates and implications for rapid particle dissolution. Nature, 359, 139-142.
15. Suzuki, S., K. Kogure and E. Tanoue (1997): Immunochemical detection of dissolved proteins and their source bacteria in marine environments. Mar. Ecol. Prog. Ser., 158, 1-9.
16. Tanoue, E. (1995): Detection of dissolved protein molecules in oceanic waters. Mar. Chem., 51, 239-252.
17. Tanoue, E. (2000): Proteins in the sea-Synthesis. p. 383-463. In Dynamics and Characterization of Marine Organic Matter, ed. by N. Handa, E. Tanoue and T. Hama, TERRAPUB, Tokyo.
18. Tanoue, E., S. Nishiyama, M. Kamo and A. Tsugita (1995): Bacterial membranes: Possible source of a major dissolved protein in seawater. Geochim. Cosmochim. Acta, 59, 2643-2648.
19. Towbin, H., T. Staehelin and J. Gordon (1979): Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. Proc. Natl. Acad. Sci. USA, 76, 4350-4354.
20. Yamada, N. and E. Tanoue (2003): Detection and partial characterization of dissolved glycoproteins in oceanic waters. Limnol. Oceanogr., 48, 1037-1048.
21. Yamada, N. and E. Tanoue (2006): The inventory and chemical characterization of dissolved proteins in oceanic waters. Prog. Oceanogr., 69, 1-18.
22. Yamada, N. and E. Tanoue (2009): Similarity of electrophoretic dissolved protein spectra from coastal to pelagic seawaters. J. Oceanogr., 65, 223-233.
23. Yamada, N., S. Suzuki and E. Tanoue (2000): Detection of Vibrio (Listonella) anguillarum porin homologue proteins and their source bacteria from coastal seawater. J. Oceanogr., 56, 583-590.