Immunochemical detection of dissolved proteins and their source bacteria in marine environments

Marine Ecology Progress Series

Volumn 158, Issue 1, 1997, Pages 1-9

  Suzuki, Satoru ^a   Kogure, Kazuhiro ^b   Tanoue, Eiichiro ^c,d  

^a KOCHI UNIVERSITY   (Japan)

^b UNIVERSITY OF TOKYO   (Japan)

^c METEOROLOGICAL RESEARCH INSTITUTE   (Japan)

^d NAGOYA UNIVERSITY   (Japan)

Author keywords

Bacteria; Dissolved protein; Porin

Indexed keywords

BACTERIA; DISSOLVED ORGANIC MATTER; PROTEINS;

BACTERIA (MICROORGANISMS); LISTONELLA ANGUILLARUM; PSEUDOMONAS; PSEUDOMONAS AERUGINOSA;

EID: 0030668610     PISSN: 01718630     EISSN: None     Source Type: Journal    
DOI: 10.3354/meps158001     Document Type: Article

References (37)

1. Amon RM, Benner R (1994) Rapid cycling of high-molecular-weight dissolved organic matter in the ocean. Nature 369: 549-552
2. Azam F, Fenchel T, Field JG, Gray JS, Meyer-Reil LA, Thingstad F (1983) The ecological role of water-column microbes in the sea. Mar Ecol Prog Ser 10:257-263
3. Benner RJ, Pakulski JD, McCarthy MD, Hedges JI, Hathcer PG (1992) Bulk chemical characteristics of dissolved organic matter in the ocean. Science 255:1561-1564
4. Bohlool BB, Schmidt EL (1968) Nonspecific staining: its control in immunofluorescence examination of soil. Science 162:1012-1014
5. Cauwet G (1978) Organic chemistry of seawater particulates. Concepts and developments. Oceanol Acta 1:99-105
6. Ducklow HW, Carlson CA (1992) Oceanic bacterial production. Adv Microb Ecol 12:113-181
7. Gerbl-Rieger S, Peters J, Kellermann J, Lottspeich F, Baumeister W (1991) Nucleotide and derived amino acid sequences of the major porin of Comamonas acidovorans and comparison of porin primary structures. J Bacteriol 173:2196-2205
8. Giovannoni SJ, Britschgi TB, Moyer CL, Field KG (1990) Genetic diversity in Sargasso Sea bacterioplankton. Nature 345:60-63
9. Guo L, Coleman CH Jr, Santschi PH (1994) The distribution of colloidal and dissolved organic carbon in the Gulf of Mexico. Mar Chem 40:1392-1403
10. Guo L, Santschi PH, Warnken KW (1995) Dynamics of dissoved organic carbon (DOC) in oceanic environment. Limnol Oceanogr 40:1392-1403
11. Hancock RE, Pool K, Benz R (1982) Outer membrane protein P of Pseudomonas aeruginosa: regulation by phosphate deficiency and formation of small anion-specific channels in lipid bilayer membrane. J Bacteriol 150:730-738
12. Harlow E, Lane D (1988) Immunoprecipitation. In: Antibodies, a laboratory manual. Cold Spring Harbor Laboratory, New York, p 421-470
13. Hedges JI (1987) Organic matter in sea water. Nature 330: 205-206
14. Holt JG, Krieg NR, Sneath PHA, Staley JT, Williams ST (1994) Genus Vibrio. In: Williams RH (ed) Bergey's manual of determinative bacteriology, 9th edn. Williams and Wilkins, Baltimore, p 192-193
15. Ishiwatari R (1992) Macromolecular material (humic substance) in the water column and sediments. Mar Chem 39:151-166
16. Jeanteur D, Lakey JH, Pattus F (1994) The porin superfamily: diversity and common features. In: Ghuysen JM, Hakenbeck R (eds) Bacterial cell wall. Elsevier, New York, p 363-380
17. Keil RG, Kirchman DL (1991) Dissolved combined amino acids in marine waters as determined by a vapor-phase hydrolysis method. Mar Chem 33:243-259
18. Keil RG, Kirchman DL (1993) Dissolved combined amino acids: chemical form and utilization by marine bacteria. Linmol Oceanogr 38:1256-1270
19. Kogure K, Simidu U, Taga N (1979) A tentative direct microscopic method for counting living marine bacteria. Can J Microbiol 25:415-420
20. Kragelund L, Nybroe O (1994) Culturability and expression of outer membrane proteins during carbon, nitrogen, or phosphorus starvation of Pseudomonas fluorescens DF57 and Pseudomonas purida DF14. Appl Environ Microbiol 60:2944-2948
21. Lee C, Wakeham SG (1989) Organic matter in seawater: biogeochemical processes. Chem Oceanogr 9:2-51
22. Morita J, Suzuki S, Kusuda R (1996) Metalloprotease produced by Listonella anguillarum shows similar activity to plasma activated protein C in rainbow trout coagulation cascade. Fish Pathol 31:9-17
23. Pomeroy LR (1974) The ocean's food web: a changing paradigm. BioScience 24:499-504
24. Porter K, Feig YS (1980) The use of DAPI for identifying and counting aquatic microflora. Limnol Oceanogr 25:943-948
25. Pukulski JD, Benner R (1994) Abundance and distribution of carbohaydrates in the ocean. Limnol Oceanogr 39:930-940
26. Rashid MA (1985) Geochemistry of marine humic compounds. Springer-Verlag, New York
27. Schmidt TM, DeLong EF, Pace NR (1991) Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing. J Bacteriol 173:4371-4378
28. Simon M, Mathes A, Blanch A, Engelhardt H (1996) Characterization of a porin from the outer membrane of Vibrio anguillarum. J Bacteriol 178:4182-4188
29. Suzuki S, Kawaguchi M, Mizuno K, Takama K, Yuki N (1994) Immunological properties and ganglioside recognitions by Campylobacter jejuni-enterotoxin and cholera toxin. FEMS Immunol Med Microbiol 8:207-212
30. Suzuki S, Kuroe K, Kusuda R (1993) Characteristics of porin-like major outer membrane proteins of Listonella anguillara serotypes J-O-1, -2 and -3. Biochem Mol Biol Int 32:605-613
31. Suzuki S, Kuroe K, Yasue K, Kusuda R (1996) Antigenicity and N-terminal amino acid sequence of a 35 kDa porin-like protein of Listonella (Vibrio) anguillarum: comparison among different serotypes and other bacterial species. Lett Appl Microbiol 19:276-280
32. Tanoue E (1995) Detection of dissolved protein molecules in oceanic waters. Mar Chem 51:239-252
33. Tanoue E, Ishii M, Midorikawa T (1996) Discrete dissolved and particulate proteins in oceanic waters. Limnol Oceanogr 41:1334-1343
34. Tanoue E, Nishimura S, Kamo K, Tsugita A (1995) Bacterial membranes: possible source of a major dissolved protein in seawater. Geochim Cosmochim Acta 59:2643-2648
35. Towbin H, Staehelin T, Gordon J (1979) Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. Proc Natl Acad Sci USA 76:4350-4354
36. Xu HS, Roberts N, Singleton FL, Attwell RW, Grimes DJ, Colwell RR (1982) Survival and viability of nonculturable Escherichia coli and Vibrio cholerae in the estuarine and marine environment. Microb Ecol 8:313-323
37. Yoshihara E, Gotoh N, Nishino T, Nakae T (1996) Protein D2 porin of the Pseudomonas aeruginosa outer membrane bears the protease activity. FEBS Lett 394:179-182