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Volumn 50, Issue 1, 2010, Pages 124-129

Palaeophylogenomics of the vertebrate ancestor - Impact of hidden paralogy on hagfish and lamprey gene phylogeny

Author keywords

[No Author keywords available]

Indexed keywords

BONE MORPHOGENETIC PROTEIN; CDX 2 3 PROTEIN; CDX-2-3 PROTEIN; EMPTY SPIRACLES HOMEOBOX PROTEINS; HOMEODOMAIN PROTEIN; RETINOIC ACID RECEPTOR; TRANSACTIVATOR PROTEIN; TRANSCRIPTION FACTOR;

EID: 77954927657     PISSN: 15407063     EISSN: 15577023     Source Type: Journal    
DOI: 10.1093/icb/icq044     Document Type: Conference Paper
Times cited : (44)

References (38)
  • 1
    • 33645691679 scopus 로고    scopus 로고
    • Evolution of hormone-receptor complexity by molecular exploitation
    • Bridgham JT, Carroll SM, Thornton JW. 2006. Evolution of hormone-receptor complexity by molecular exploitation. Science 312:97-101.
    • (2006) Science , vol.312 , pp. 97-101
    • Bridgham, J.T.1    Carroll, S.M.2    Thornton, J.W.3
  • 2
    • 0035749071 scopus 로고    scopus 로고
    • Bacterial molecular phylogeny using supertree approach
    • Daubin V, Gouy M, Perriere G. 2001. Bacterial molecular phylogeny using supertree approach. Genome Inform 12:155-164
    • (2001) Genome Inform , vol.12 , pp. 155-164
    • Daubin, V.1    Gouy, M.2    Perriere, G.3
  • 3
    • 0036307616 scopus 로고    scopus 로고
    • Structure and expression of three Emx genes in the dogfish Scyliorhinus canicula: Functional and evolutionary implications
    • Derobert Y, Plouhinec JL, Sauka-Spengler T, Le Mentec C, Baratte B, Jaillard D, Mazan S. 2002. Structure and expression of three Emx genes in the dogfish Scyliorhinus canicula: functional and evolutionary implications. Dev Biol 247:390-404.
    • (2002) Dev Biol , vol.247 , pp. 390-404
    • Derobert, Y.1    Plouhinec, J.L.2    Sauka-Spengler, T.3    Le Mentec, C.4    Baratte, B.5    Jaillard, D.6    Mazan, S.7
  • 4
    • 0033603539 scopus 로고    scopus 로고
    • Phylogenetic classification and the universal tree
    • Doolittle WF. 1999. Phylogenetic classification and the universal tree. Science 284:2124-2129
    • (1999) Science , vol.284 , pp. 2124-2129
    • Doolittle, W.F.1
  • 6
    • 74349086025 scopus 로고    scopus 로고
    • The origin of bmp16, a novel Bmp2/4 relative, retained in teleost fish genomes
    • Feiner N, Begemann G, Renz AJ, Meyer A, Kuraku S. 2009. The origin of bmp16, a novel Bmp2/4 relative, retained in teleost fish genomes. BMC Evol Biol 9:277.
    • (2009) BMC Evol Biol , vol.9 , pp. 277
    • Feiner, N.1    Begemann, G.2    Renz, A.J.3    Meyer, A.4    Kuraku, S.5
  • 8
    • 1642350730 scopus 로고    scopus 로고
    • Evolution of the Hox/ ParaHox gene clusters
    • Ferrier DE, Minguillon C. 2003. Evolution of the Hox/ ParaHox gene clusters. Int J Dev Biol 47:605-611
    • (2003) Int J Dev Biol , vol.47 , pp. 605-611
    • Ferrier, D.E.1    Minguillon, C.2
  • 9
    • 0037092011 scopus 로고    scopus 로고
    • Hox cluster organization in the jawless vertebrate Petromyzon marinus
    • Force A, Amores A, Postlethwait JH. 2002. Hox cluster organization in the jawless vertebrate Petromyzon marinus. J Exp Zool 294:30-46.
    • (2002) J Exp Zool , vol.294 , pp. 30-46
    • Force, A.1    Amores, A.2    Postlethwait, J.H.3
  • 10
    • 33748305741 scopus 로고    scopus 로고
    • Evidence that mechanisms of fin development evolved in the midline of early vertebrates
    • Freitas R, Zhang G, Cohn MJ. 2006. Evidence that mechanisms of fin development evolved in the midline of early vertebrates. Nature 442:1033-1037
    • (2006) Nature , vol.442 , pp. 1033-1037
    • Freitas, R.1    Zhang, G.2    Cohn, M.J.3
  • 11
    • 56849106950 scopus 로고    scopus 로고
    • ParaHox cluster evolution- hagfish and beyond
    • Furlong RF, Mulley JF. 2008. ParaHox cluster evolution- hagfish and beyond. Zoolog Sci 25:955-959
    • (2008) Zoolog Sci , vol.25 , pp. 955-959
    • Furlong, R.F.1    Mulley, J.F.2
  • 13
    • 0036593395 scopus 로고    scopus 로고
    • Ancient phylogenetic relationships
    • Gribaldo S, Philippe H. 2002. Ancient phylogenetic relationships. Theor Popul Biol 61:391-408.
    • (2002) Theor Popul Biol , vol.61 , pp. 391-408
    • Gribaldo, S.1    Philippe, H.2
  • 15
    • 34648816680 scopus 로고    scopus 로고
    • The 2R hypothesis: An update
    • Kasahara M. 2007. The 2R hypothesis: an update. Curr Opin Immunol 19:547-552
    • (2007) Curr Opin Immunol , vol.19 , pp. 547-552
    • Kasahara, M.1
  • 16
    • 0036951701 scopus 로고    scopus 로고
    • Developmental expression of zebrafish emx1 during early embryogenesis
    • Kawahara A, Dawid IB. 2002. Developmental expression of zebrafish emx1 during early embryogenesis. Gene Expr Patterns 2:201-206.
    • (2002) Gene Expr Patterns , vol.2 , pp. 201-206
    • Kawahara, A.1    Dawid, I.B.2
  • 17
    • 56849126764 scopus 로고    scopus 로고
    • Insights into cyclostome phylogenomics: Pre-2R or post-2R
    • Kuraku S. 2008. Insights into cyclostome phylogenomics: pre-2R or post-2R. Zoolog Sci 25:960-968
    • (2008) Zoolog Sci , vol.25 , pp. 960-968
    • Kuraku, S.1
  • 18
    • 69449108407 scopus 로고    scopus 로고
    • The evolution and maintenance of Hox gene clusters in vertebrates and the teleost-specific genome duplication
    • Kuraku S, Meyer A. 2009. The evolution and maintenance of Hox gene clusters in vertebrates and the teleost-specific genome duplication. Int J Dev Biol 53:765-773
    • (2009) Int J Dev Biol , vol.53 , pp. 765-773
    • Kuraku, S.1    Meyer, A.2
  • 19
    • 57749184792 scopus 로고    scopus 로고
    • Timing of genome duplications relative to the origin of the vertebrates: Did cyclostomes diverge before or after?
    • Kuraku S, Meyer A, Kuratani S. 2009a. Timing of genome duplications relative to the origin of the vertebrates: Did cyclostomes diverge before or after? Mol Biol Evol 26:47-59.
    • (2009) Mol Biol Evol , vol.26 , pp. 47-59
    • Kuraku, S.1    Meyer, A.2    Kuratani, S.3
  • 20
    • 74349099191 scopus 로고    scopus 로고
    • Jawless fishes (Cyclostomata)
    • Hedges SB, Kumar S, editors. Oxford (UK): Oxford University Press
    • Kuraku S, Ota KG, Kuratani S. 2009b. Jawless fishes (Cyclostomata). In: Hedges SB, Kumar S, editors. The Timetree of Life. Oxford (UK): Oxford University Press. p. 317-319.
    • (2009) The Timetree of Life , pp. 317-319
    • Kuraku, S.1    Ota, K.G.2    Kuratani, S.3
  • 21
    • 44349193286 scopus 로고    scopus 로고
    • Noncanonical role of Hox14 revealed by its expression patterns in lamprey and shark
    • Kuraku S, Takio Y, Tamura K, Aono H, Meyer A, Kuratani S. 2008. Noncanonical role of Hox14 revealed by its expression patterns in lamprey and shark. Proc Natl Acad Sci USA 105:6679-6683
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 6679-6683
    • Kuraku, S.1    Takio, Y.2    Tamura, K.3    Aono, H.4    Meyer, A.5    Kuratani, S.6
  • 22
    • 33144488245 scopus 로고    scopus 로고
    • Function of retinoid nuclear receptors: Lessons from genetic and pharmacological dissections of the retinoic acid signaling pathway during mouse embryogenesis
    • Mark M, Ghyselinck NB, Chambon P. 2006. Function of retinoid nuclear receptors: Lessons from genetic and pharmacological dissections of the retinoic acid signaling pathway during mouse embryogenesis. Annu Rev Pharmacol Toxicol 46:451-480
    • (2006) Annu Rev Pharmacol Toxicol , vol.46 , pp. 451-480
    • Mark, M.1    Ghyselinck, N.B.2    Chambon, P.3
  • 23
    • 9344259675 scopus 로고    scopus 로고
    • Conservation and divergence of BMP2/4 genes in the lamprey: Expression and phylogenetic analysis suggest a single ancestral vertebrate gene
    • McCauley DW, Bronner-Fraser M. 2004. Conservation and divergence of BMP2/4 genes in the lamprey: Expression and phylogenetic analysis suggest a single ancestral vertebrate gene. Evol Dev 6:411-422
    • (2004) Evol Dev , vol.6 , pp. 411-422
    • McCauley, D.W.1    Bronner-Fraser, M.2
  • 24
    • 33744999415 scopus 로고    scopus 로고
    • Importance of SoxE in neural crest development and the evolution of the pharynx
    • McCauley DW, Bronner-Fraser M. 2006. Importance of SoxE in neural crest development and the evolution of the pharynx. Nature 441:750-752
    • (2006) Nature , vol.441 , pp. 750-752
    • McCauley, D.W.1    Bronner-Fraser, M.2
  • 25
    • 0035193659 scopus 로고    scopus 로고
    • Divergence pattern of animal gene families and relationship with the Cambrian explosion
    • Miyata T, Suga H. 2001. Divergence pattern of animal gene families and relationship with the Cambrian explosion. Bioessays 23:1018-1027
    • (2001) Bioessays , vol.23 , pp. 1018-1027
    • Miyata, T.1    Suga, H.2
  • 26
    • 49949111856 scopus 로고    scopus 로고
    • EvoD/Vo: The origins of BMP signalling in the neuroectoderm
    • Mizutani CM, Bier E. 2008. EvoD/Vo: the origins of BMP signalling in the neuroectoderm. Nat Rev Genet 9:663-677
    • (2008) Nat Rev Genet , vol.9 , pp. 663-677
    • Mizutani, C.M.1    Bier, E.2
  • 27
    • 0028834350 scopus 로고
    • Differential expression of two zebrafish emx homeoprotein mRNAs in the developing brain
    • Morita T, Nitta H, Kiyama Y, Mori H, Mishina M. 1995. Differential expression of two zebrafish emx homeoprotein mRNAs in the developing brain. Neurosci Lett 198:131-134
    • (1995) Neurosci Lett , vol.198 , pp. 131-134
    • Morita, T.1    Nitta, H.2    Kiyama, Y.3    Mori, H.4    Mishina, M.5
  • 28
    • 70350343702 scopus 로고    scopus 로고
    • Conflict and resolution between phylogenies inferred from molecular and phenotypic data sets for hagfish, lampreys, and gnathostomes
    • Near TJ. 2009. Conflict and resolution between phylogenies inferred from molecular and phenotypic data sets for hagfish, lampreys, and gnathostomes. J Exp Zool B Mol Dev Evol 312:749-761
    • (2009) J Exp Zool B Mol Dev Evol , vol.312 , pp. 749-761
    • Near, T.J.1
  • 29
    • 34247279339 scopus 로고    scopus 로고
    • Hagfish embryology with reference to the evolution of the neural crest
    • Ota KG, Kuraku S, Kuratani S. 2007. Hagfish embryology with reference to the evolution of the neural crest. Nature 446:672-675
    • (2007) Nature , vol.446 , pp. 672-675
    • Ota, K.G.1    Kuraku, S.2    Kuratani, S.3
  • 33
    • 45749086679 scopus 로고    scopus 로고
    • The amphioxus genome and the evolution of the chordate karyotype
    • Putnam NH, et al. 2008. The amphioxus genome and the evolution of the chordate karyotype. Nature 453:1064-1071
    • (2008) Nature , vol.453 , pp. 1064-1071
    • Putnam, N.H.1
  • 34
    • 0037123637 scopus 로고    scopus 로고
    • Heterotopic shift of epithelial-mesenchymal interactions in vertebrate jaw evolution
    • Shigetani Y, Sugahara F, Kawakami Y, Murakami Y, Hirano S, Kuratani S. 2002. Heterotopic shift of epithelial-mesenchymal interactions in vertebrate jaw evolution. Science 296:1316-1319
    • (2002) Science , vol.296 , pp. 1316-1319
    • Shigetani, Y.1    Sugahara, F.2    Kawakami, Y.3    Murakami, Y.4    Hirano, S.5    Kuratani, S.6
  • 37
    • 34247342594 scopus 로고    scopus 로고
    • Survey sequencing and comparative analysis of the elephant shark (Callorhinchus milii) genome
    • Venkatesh B, et al. 2007. Survey sequencing and comparative analysis of the elephant shark (Callorhinchus milii) genome. PLoS Biol 5:e101.
    • (2007) PLoS Biol , vol.5
    • Venkatesh, B.1
  • 38
    • 67650844270 scopus 로고    scopus 로고
    • Emx3 is required for the differentiation of dorsal telencephalic neurons
    • Viktorin G, Chiuchitu C, Rissler M, Varga ZM, Westerfield M. 2009. Emx3 is required for the differentiation of dorsal telencephalic neurons. Dev Dyn 238:1984-1998
    • (2009) Dev Dyn , vol.238 , pp. 1984-1998
    • Viktorin, G.1    Chiuchitu, C.2    Rissler, M.3    Varga, Z.M.4    Westerfield, M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.