DNA microarrays-based microRNA expression profiles derived from formalin-fixed paraffinembedded tissue blocks of squammous cell carcinoma of larynx

Chinese Journal of Pathology

Volumn 39, Issue 6, 2010, Pages 391-395

  Li, Lin ^a   Zhang, Zong Min ^a   Liu, Yu ^b   Wei, Ming Hui ^b   Xue, Li Yan ^b   Zou, Shuang Mei ^b   Di, Xue Bing ^b   Han, Nai Jun ^b   Zhang, Kai Tai ^b   Xu, Zhen Gang ^b   Gao, Yan Ning ^a  

^a CANCER HOSPITAL   (China)

^b NONE

Author keywords

Carcinoma; Laryngeal neoplasms; MicroRNAs; Neoplasm metastasis; Oligonucleotide array sequence analysis; Squamous cell

Indexed keywords

MICRORNA; MIRN15 MICRORNA, HUMAN; MIRN16 MICRORNA, HUMAN; MIRN23 MICRORNA, HUMAN; MIRN425 MICRORNA, HUMAN; PARAFFIN;

ARTICLE; DNA MICROARRAY; GENE EXPRESSION PROFILING; GENETICS; HUMAN; LARYNX TUMOR; LYMPH NODE METASTASIS; METABOLISM; METHODOLOGY; PATHOLOGY; SQUAMOUS CELL CARCINOMA;

CARCINOMA, SQUAMOUS CELL; GENE EXPRESSION PROFILING; HUMANS; LARYNGEAL NEOPLASMS; LYMPHATIC METASTASIS; MICRORNAS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PARAFFIN EMBEDDING;

EID: 77954667575     PISSN: 05295807     EISSN: None     Source Type: Journal    
DOI: 10.3760/cma.j.issn.0529-5807.2010.06.007     Document Type: Article

References (19)

1. Lewis BP, Burge CB, Bartel DP. Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell, 2005, 120(1) : 15-20.
2. Chen X, Ba Y, Ma L, et al. Characterization of microRNAs in serum : a novel class of biomarkers for diagnosis of cancer and other diseases. Cell Res, 2008, 18(10) : 997-1006.
3. miRNA microarray system with miRNA complete labeling and Hyb kit protocol [ DB/OL]. [2009-10-20]. www.agilent.com.
4. R Development Core Team (2009). R: A language and environment for statistical computing. [ DB/OL] R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0. [ 2009-04-01 ]. http://www.R-project.org.
5. Zhang B, Pan X, Cobb GP, et al. microRNAs as oncogenes and tumor suppressors. Dev Biol, 2007, 302(1) : 1-12.
6. Esquela-Kerscher A, Slack FJ. Oncomirs-microRNAs with a role in cancer. Nat Rev Cancer, 2006, 6(4) : 259-269.
7. Manikandan J, Aarthi JJ, Kumar SD, et al. Oncomirs : the potential role of non-coding microRNAs in understanding cancer. Bioinformation, 2008, 2(8) : 330-334.
8. Nelson PT, Baldwin DA, Kloosterman WP, et al. RAKE and LNA-ISH reveal microRNA expression and localization in archival human brain. RNA, 2006, 12(2) : 187-191.
9. Zhang X, Chen J, Radcliffe T, et al. An array-based analysis of microRNA expression comparing matched frozen and formalin-fixed paraffin-embedded human tissue samples. J Mol Diagn, 2008, 10 (6) : 513-519.
10. Liu A, Tetzlaff MT, Vanbelle P, et al. MicroRNA expression profiling outperforms mRNA expression profiling in formalin-fixed paraffin-embedded tissues. Int J Clin Exp Pathol, 2009, 2(6) : 519-527.
11. Szafranska AE, Davison TS, Shingara J, et al. Accurate molecular characterization of formalin-fixed, paraffin-embedded tissues by microRNA expression profiling. J Mol Diagn, 2008, 10(5) : 415-423.
12. Fletcher AM, Heaford AC, Trask DK. Detection of metastatic head and neck squamous cell carcinoma using the relative expression of tissue-specific mir-205. Transl Oncol, 2008, 1 (4) : 202-208.
13. Pallante P, Visone R, Ferracin M, et al. MicroRNA deregulation in human thyroid papillary carcinomas. Endocr Relat Cancer, 2006, 13(2) : 497-508.
14. Childs G, Fazzari M, Kung G, et al. Low-level expression of microRNAs let-7d and miR-205 are prognostic markers of head and neck squamous cell carcinoma. Am J Pathol, 2009, 174(3) : 736-745.
15. Bottoni A, Piccin D, Tagliati F, et al. miR-15a and miR-16-1 down-regulation in pituitary adenomas. J Cell Physiol, 2005, 204 (1) : 280-285.
16. Bonci D, Coppola V, Musumeci M, et al. The miR-15a-miR-16-l cluster controls prostate cancer by targeting multiple oncogenic activities. Nat Med, 2008, 14(11) : 1271-1277.
17. Liu Q, Fu H, Sun F, et al. miR-16 family induces cell cycle arrest by regulating multiple cell cycle genes. Nucleic Acids Res, 2008, 36(16) : 5391-5404.
18. Huang S, He X, Ding J, et al. Upregulation of miR-23a approximately 27a approximately 24 decreases transforming growth factor-beta-induced tumor-suppressive activities in human hepatocellular carcinoma cells. Int J Cancer, 2008, 123(4) : 972-978.
19. Gal H, Pandi G, Kanner AA, et al. MIR-451 and Imaanib mesylate inhibit tumor growth of Glioblastoma stem cells. Biochem Biophys Res Commun, 2008, 376(1) : 86-90.