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Volumn 6, Issue 4, 2010, Pages 350-360

Differential transcriptional analysis between red and white skeletal muscle of Chinese Meishan pigs

Author keywords

Affymetrix; Differential transcriptional analysis; Longissimus doris; Pig; Soleus

Indexed keywords

DORIS; SUIDAE; SUS;

EID: 77954650696     PISSN: 14492288     EISSN: None     Source Type: Journal    
DOI: 10.7150/ijbs.6.350     Document Type: Article
Times cited : (58)

References (35)
  • 1
    • 67149139514 scopus 로고    scopus 로고
    • Skeletal muscle fibre plasticity in response to selected environmental and physiological stimuli
    • Matsakas A, Patel K. Skeletal muscle fibre plasticity in response to selected environmental and physiological stimuli. Histol Histopathol. 2009; 24: 611-629.
    • (2009) Histol Histopathol , vol.24 , pp. 611-629
    • Matsakas, A.1    Patel, K.2
  • 2
    • 64749096528 scopus 로고    scopus 로고
    • Muscle fiber characteristics, myofibrillar protein isoforms, and meat quality
    • Choi YM, Kim BC. Muscle fiber characteristics, myofibrillar protein isoforms, and meat quality. Livest Sci. 2009; 122: 105-118.
    • (2009) Livest Sci , vol.122 , pp. 105-118
    • Choi, Y.M.1    Kim, B.C.2
  • 3
    • 8744309971 scopus 로고    scopus 로고
    • Differential expression profiling of the proteomes and their mRNAs in porcine white and red skeletal muscles
    • Kim NK, Joh JH, Park HR, et al. Differential expression profiling of the proteomes and their mRNAs in porcine white and red skeletal muscles. Proteomics. 2004; 4: 3422-3428.
    • (2004) Proteomics , vol.4 , pp. 3422-3428
    • Kim, N.K.1    Joh, J.H.2    Park, H.R.3
  • 4
    • 0038605409 scopus 로고    scopus 로고
    • Determinants of meat quality: Tenderness
    • Maltin C, Balcerzak D, Tilley R, et al. Determinants of meat quality: tenderness. Proc Nutr Soc. 2003; 62: 337-347.
    • (2003) Proc Nutr Soc , vol.62 , pp. 337-347
    • Maltin, C.1    Balcerzak, D.2    Tilley, R.3
  • 5
    • 0037207841 scopus 로고    scopus 로고
    • Relationships of myosin heavy chain fibre types to meat quality traits in traditional and modern pigs
    • Chang KC, da Costa N, Blackley R, et al. Relationships of myosin heavy chain fibre types to meat quality traits in traditional and modern pigs. Meat Sci. 2003; 64: 93-103.
    • (2003) Meat Sci , vol.64 , pp. 93-103
    • Chang, K.C.1    da Costa, N.2    Blackley, R.3
  • 6
    • 34249081419 scopus 로고    scopus 로고
    • Key signalling factors and pathways in the molecular determination of skeletal muscle phenotype
    • Chang KC. Key signalling factors and pathways in the molecular determination of skeletal muscle phenotype. Animal. 2007; 1: 681-698.
    • (2007) Animal , vol.1 , pp. 681-698
    • Chang, K.C.1
  • 7
    • 0033566039 scopus 로고    scopus 로고
    • Skeletal muscle fibres as factors for pork quality
    • Karlsson AH, Klont RE, Fernandez X. Skeletal muscle fibres as factors for pork quality. Livest Prod Sci. 1999; 60: 255-269.
    • (1999) Livest Prod Sci , vol.60 , pp. 255-269
    • Karlsson, A.H.1    Klont, R.E.2    Fernandez, X.3
  • 8
  • 9
    • 1842427593 scopus 로고    scopus 로고
    • Effects of breed, diet and muscle on fat deposition and eating quality in pigs
    • Wood JD, Nute GR, Richardson RI, et al. Effects of breed, diet and muscle on fat deposition and eating quality in pigs. Meat Sci. 2004; 67: 651-667.
    • (2004) Meat Sci , vol.67 , pp. 651-667
    • Wood, J.D.1    Nute, G.R.2    Richardson, R.I.3
  • 10
    • 74949131104 scopus 로고    scopus 로고
    • Calcineurin signaling and the slow oxidative skeletal muscle fiber type
    • Mallinson J, Meissner J, Chang KC. Calcineurin signaling and the slow oxidative skeletal muscle fiber type. Int Rev Cell Mol Biol. 2009; 277: 67-101.
    • (2009) Int Rev Cell Mol Biol , vol.277 , pp. 67-101
    • Mallinson, J.1    Meissner, J.2    Chang, K.C.3
  • 11
    • 84984934477 scopus 로고    scopus 로고
    • Expression profiling using cDNA microarrays
    • Duggan DJ, Bittner M, Chen Y, et al. Expression profiling using cDNA microarrays. Nat Genet. 1999; 21(Suppl): S10-S14.
    • (1999) Nat Genet , vol.21 , Issue.SUPPL.
    • Duggan, D.J.1    Bittner, M.2    Chen, Y.3
  • 12
    • 0034996862 scopus 로고    scopus 로고
    • Differential global gene expression in red and white skeletal muscle
    • Campbell WG, Gordon SE, Carlson CJ, et al. Differential global gene expression in red and white skeletal muscle. Am J Physiol Cell Physiol. 2001; 280: 763-768.
    • (2001) Am J Physiol Cell Physiol , vol.280 , pp. 763-768
    • Campbell, W.G.1    Gordon, S.E.2    Carlson, C.J.3
  • 13
    • 9144245740 scopus 로고    scopus 로고
    • Development of a porcine skeletal muscle cDNA microarray: Analysis of differential transcript expression in phenotypically distinct muscles
    • Bai Q, McGillivray C, da Costa N, et al. Development of a porcine skeletal muscle cDNA microarray: Analysis of differential transcript expression in phenotypically distinct muscles. BMC Genomics. 2003; 4: 8.
    • (2003) BMC Genomics , vol.4 , pp. 8
    • Bai, Q.1    McGillivray, C.2    da Costa, N.3
  • 14
    • 33746216967 scopus 로고    scopus 로고
    • Annotation of the Affymetrix porcine genome microarray
    • Tsai S, Cassady JP, Freking BA, et al. Annotation of the Affymetrix porcine genome microarray. Anim Genet. 2006; 37: 423-424.
    • (2006) Anim Genet , vol.37 , pp. 423-424
    • Tsai, S.1    Cassady, J.P.2    Freking, B.A.3
  • 15
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
    • Livak KJ, Schmittgen TD. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods. 2001; 25: 402-408.
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 16
    • 0028060295 scopus 로고
    • Myosin isoforms in mammalian skeletal muscle
    • Schiaffino S, Reggiani C. Myosin isoforms in mammalian skeletal muscle. J Appl Physiol. 1994; 77: 493-501.
    • (1994) J Appl Physiol , vol.77 , pp. 493-501
    • Schiaffino, S.1    Reggiani, C.2
  • 18
    • 22944487620 scopus 로고    scopus 로고
    • The relationship between muscle fiber characteristics, postmortem metabolic rate, and meat quality of pig longissimus dorsi muscle
    • Ryu YC, Kim BC. The relationship between muscle fiber characteristics, postmortem metabolic rate, and meat quality of pig longissimus dorsi muscle. Meat Sci. 2005; 71: 351-357.
    • (2005) Meat Sci , vol.71 , pp. 351-357
    • Ryu, Y.C.1    Kim, B.C.2
  • 19
    • 63049118828 scopus 로고    scopus 로고
    • Understanding Haemophilus parasuis infection in porcine spleen through a transcriptomics approach
    • Chen HB, Li CC, Fang MD, et al. Understanding Haemophilus parasuis infection in porcine spleen through a transcriptomics approach. BMC Genomics. 2009; 10: 64.
    • (2009) BMC Genomics , vol.10 , pp. 64
    • Chen, H.B.1    Li, C.C.2    Fang, M.D.3
  • 20
    • 0025772222 scopus 로고
    • Extracellular matrix molecules and their receptors: An overview with special emphasis on periodontal tissues
    • Uitto VJ. Extracellular matrix molecules and their receptors: an overview with special emphasis on periodontal tissues. Crit Rev Oral Biol Med. 1991; 2: 323-354.
    • (1991) Crit Rev Oral Biol Med , vol.2 , pp. 323-354
    • Uitto, V.J.1
  • 21
    • 0035844869 scopus 로고    scopus 로고
    • Focal contacts as mechanosensors: Externally applied local mechanical force induces growth of focal contacts by an mDia1-dependent and ROCK-independent mechanism
    • Riveline D, Zamir E, Balaban NQ, et al. Focal contacts as mechanosensors: externally applied local mechanical force induces growth of focal contacts by an mDia1-dependent and ROCK-independent mechanism. J Cell Biol. 2001; 153:1175-1186.
    • (2001) J Cell Biol , vol.153 , pp. 1175-1186
    • Riveline, D.1    Zamir, E.2    Balaban, N.Q.3
  • 23
    • 0032935112 scopus 로고    scopus 로고
    • Sulfated glycosaminoglycans and collagen in two bovine muscles (M. Semitendinosus and M. Psoas major) differing in texture
    • Pedersen ME, Kolset SO, Sørensen T, Eggen KH. Sulfated glycosaminoglycans and collagen in two bovine muscles (M. Semitendinosus and M. Psoas major) differing in texture. J Agric Food Chem. 1999; 47: 1445-1452.
    • (1999) J Agric Food Chem , vol.47 , pp. 1445-1452
    • Pedersen, M.E.1    Kolset, S.O.2    Sørensen, T.3    Eggen, K.H.4
  • 24
    • 0031944290 scopus 로고    scopus 로고
    • Regulation of immune responses by TGF-beta
    • Letterio J, Roberts A. Regulation of immune responses by TGF-beta. Annu Rev Immunol. 1998; 16: 137-161.
    • (1998) Annu Rev Immunol , vol.16 , pp. 137-161
    • Letterio, J.1    Roberts, A.2
  • 25
    • 0842346190 scopus 로고    scopus 로고
    • Transforming growth factorbeta-related proteins: An ancestral and widespread superfamily of cytokines in metazoans
    • Herpin A, Lelong C, Favrel P. Transforming growth factorbeta-related proteins: an ancestral and widespread superfamily of cytokines in metazoans. Dev Comp Immunol. 2004; 28: 461-485.
    • (2004) Dev Comp Immunol , vol.28 , pp. 461-485
    • Herpin, A.1    Lelong, C.2    Favrel, P.3
  • 26
    • 63249091298 scopus 로고    scopus 로고
    • Effect of transforming growth factor-beta1 on decorin expression and muscle morphology during chicken embryonic and posthatch growth and development
    • Li X, Velleman SG. Effect of transforming growth factor-beta1 on decorin expression and muscle morphology during chicken embryonic and posthatch growth and development. Poult Sci. 2009; 88: 387-397.
    • (2009) Poult Sci , vol.88 , pp. 387-397
    • Li, X.1    Velleman, S.G.2
  • 27
    • 33746066758 scopus 로고    scopus 로고
    • TGF-beta1 favors the development of fast type identity during soleus muscle regeneration
    • Noirez P, Torres S, Cebrian J, et al. TGF-beta1 favors the development of fast type identity during soleus muscle regeneration. J Muscle Res Cell Motil. 2006; 27: 1-8.
    • (2006) J Muscle Res Cell Motil , vol.27 , pp. 1-8
    • Noirez, P.1    Torres, S.2    Cebrian, J.3
  • 28
    • 40949152810 scopus 로고    scopus 로고
    • Skeletal muscle cells express the profibrotic cytokine connective tissue growth factor (CTGF/CCN2), which induces their dedifferentiation
    • Vial C, Zúñiga LM, Cabello-Verrugio C, et al. Skeletal muscle cells express the profibrotic cytokine connective tissue growth factor (CTGF/CCN2), which induces their dedifferentiation. J Cell Physiol. 2008; 215: 410-421.
    • (2008) J Cell Physiol , vol.215 , pp. 410-421
    • Vial, C.1    Zúñiga, L.M.2    Cabello-Verrugio, C.3
  • 29
    • 33646015711 scopus 로고    scopus 로고
    • Sebald W, et al. p38 inhibitors prevent TGF-beta-induced myofibroblast transdifferentiation in human tenon fibroblasts
    • Meyer-Ter-Vehn T, Gebhardt S, Sebald W, et al. p38 inhibitors prevent TGF-beta-induced myofibroblast transdifferentiation in human tenon fibroblasts. Invest Ophthalmol Vis Sci. 2006; 47: 1500-1509.
    • (2006) Invest Ophthalmol Vis Sci , vol.47 , pp. 1500-1509
    • Meyer-Ter-Vehn, T.1    Gebhardt, S.2
  • 30
    • 0036668278 scopus 로고    scopus 로고
    • The GATA family (vertebrates and invertebrates)
    • Patient RK, McGhee JD. The GATA family (vertebrates and invertebrates). Curr Opin Genet Dev. 2002; 12: 416-422.
    • (2002) Curr Opin Genet Dev , vol.12 , pp. 416-422
    • Patient, R.K.1    McGhee, J.D.2
  • 31
    • 0034671733 scopus 로고    scopus 로고
    • The zinc finger-containing transcription factors GATA-4, -5, and -6. Ubiquitously expressed regulators of tissuespecific gene expression
    • Molkentin JD. The zinc finger-containing transcription factors GATA-4, -5, and -6. Ubiquitously expressed regulators of tissuespecific gene expression. J Biol Chem. 2000; 275: 38949-38952.
    • (2000) J Biol Chem , vol.275 , pp. 38949-38952
    • Molkentin, J.D.1
  • 32
    • 0030578421 scopus 로고    scopus 로고
    • GATA-6: A zinc finger transcription factor that is expressed in multiple cell lineages derived from lateral mesoderm
    • Morrisey EE, Ip HS, Lu MM, Parmacek MS. GATA-6: a zinc finger transcription factor that is expressed in multiple cell lineages derived from lateral mesoderm. Dev Biol. 1996; 177: 309-322.
    • (1996) Dev Biol , vol.177 , pp. 309-322
    • Morrisey, E.E.1    Ip, H.S.2    Lu, M.M.3    Parmacek, M.S.4
  • 33
    • 14244252323 scopus 로고    scopus 로고
    • GATA-6 can act as a positive or negative regulator of smooth muscle-specific gene expression
    • Yin F, Herring BP. GATA-6 can act as a positive or negative regulator of smooth muscle-specific gene expression. J Biol Chem. 2005; 280: 4745-4752.
    • (2005) J Biol Chem , vol.280 , pp. 4745-4752
    • Yin, F.1    Herring, B.P.2
  • 34
    • 33744830560 scopus 로고    scopus 로고
    • 130-kDa smooth muscle myosin light chain kinase is transcribed from a CArG-dependent, internal promoter within the mouse mylk gene
    • Yin F, Hoggatt AM, Zhou J, Herring BP. 130-kDa smooth muscle myosin light chain kinase is transcribed from a CArG-dependent, internal promoter within the mouse mylk gene. Am J Physiol Cell Physiol. 2006; 290: C1599-C1609.
    • (2006) Am J Physiol Cell Physiol , vol.290
    • Yin, F.1    Hoggatt, A.M.2    Zhou, J.3    Herring, B.P.4
  • 35
    • 34548719419 scopus 로고    scopus 로고
    • GATA-6 mediates human bladder smooth muscle differentiation: Involvement of a novel enhancer element in regulating α-smooth muscle actin gene expression
    • Kanematsu A, Ramachandran A, Adam RM. GATA-6 mediates human bladder smooth muscle differentiation: involvement of a novel enhancer element in regulating α-smooth muscle actin gene expression. Am J Physiol Cell Physiol. 2007; 293: C1093-C1102.
    • (2007) Am J Physiol Cell Physiol , vol.293
    • Kanematsu, A.1    Ramachandran, A.2    Adam, R.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.