A multilocus approach to harvestman (Arachnida: Opiliones) phylogeny with emphasis on biogeography and the systematics of Laniatores

Cladistics

Volumn 26, Issue 4, 2010, Pages 408-437

  Giribet, Gonzalo ^a   Vogt, Lars ^a,c   González, Abel Pérez ^b   Sharma, Prashant ^a   Kury, Adriano B ^b  

^a HARVARD UNIVERSITY   (United States)

^b FEDERAL UNIVERSITY OF RIO DE JANEIRO   (Brazil)

^c UNIVERSITY OF BONN   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARACHNID; BIOMARKER; CARBONIFEROUS; CLADISTICS; DIVERGENCE; MAXIMUM LIKELIHOOD ANALYSIS; OPTIMIZATION; PHYLOGENY; RELATEDNESS; TAXONOMY; ZOOGEOGRAPHY;

ARACHNIDA; CYPHOPHTHALMI; HESPERONEMASTOMA; LANIATORES; OPILIONES; PALPATORES; PHALANGIDA; SABACONIDAE; ZUMA ACUTA;

EID: 77954524034     PISSN: 07483007     EISSN: 10960031     Source Type: Journal    
DOI: 10.1111/j.1096-0031.2009.00296.x     Document Type: Article

References (115)

1. Benavides LR, Giribet G. An illustrated catalogue to the South American species of the cyphophthalmid family Neogoveidae (Arthropoda, Opiliones, Cyphophthalmi) with a report on 37 new species. Zootaxa 2007, 1509:1-15.
2. de Bivort BL, Giribet G. A new genus of cyphophthalmid from the Iberian Peninsula with a phylogenetic analysis of the Sironidae (Arachnida: Opiliones: Cyphophthalmi) and a SEM database of external morphology. Invertebr. Syst. 2004, 18:7-52.
3. Boyer SL, Giribet G. A new model Gondwanan taxon: systematics and biogeography of the harvestman family Pettalidae (Arachnida, Opiliones, Cyphophthalmi), with a taxonomic revision of genera from Australia and New Zealand. Cladistics 2007, 23:337-361.
4. Boyer SL, Giribet G. Welcome back New Zealand: Regional biogeography and Gondwanan origin of three endemic genera of mite harvestmen (Arachnida, Opiliones, Cyphophthalmi). J. Biogeogr. 2009, 36:1084-1099.
5. Boyer SL, Karaman I, Giribet G. The genus Cyphophthalmus (Arachnida, Opiliones, Cyphophthalmi) in Europe: a phylogenetic approach to Balkan Peninsula biogeography. Mol. Phylogenet. Evol. 2005, 36:554-567.
6. Boyer SL, Baker JM, Giribet G. Deep genetic divergences in Aoraki denticulata (Arachnida, Opiliones, Cyphophthalmi): a widespread 'mite harvestman' defies DNA taxonomy. Mol. Ecol. 2007a, 16:4999-5016.
7. Boyer SL, Clouse RM, Benavides LR, Sharma P, Schwendinger PJ, Karunarathna I, Giribet G. Biogeography of the world: a case study from cyphophthalmid Opiliones, a globally distributed group of arachnids. J. Biogeogr. 2007b, 34:2070-2085.
8. Castresana J. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol. Biol. Evol. 2000, 17:540-552.
9. Clouse RM, Giribet G. Across Lydekker's Line - first report of mite harvestmen (Opiliones: Cyphophthalmi: Stylocellidae) from New Guinea. Invertebr. Syst. 2007, 21:207-227.
10. Coddington JA, Giribet G, Harvey MS, Prendini L, Walter DE. Arachnida. Assembling the Tree of Life 2004, 296-318. Cracraft J, Donoghue MJ, In, Eds, Oxford University Press, New York, pp
11. Cokendolpher JC. A new genus of North American harvestmen (Arachnida: Opiliones: Palpatores). Festschrift for Walter W. Dalquest in Honor of His Sixty-sixth Birthday 1984, 27-43. Horner NV. In, Ed, Midwestern State University, Wichita Falls, pp
12. Cokendolpher JC, Lee VF. Catalogue of the Cyphopalpatores and Bibliography of the Harvestmen (Arachnida, Opiliones) of Greenland, Canada, U.S.A., and Mexico 1993, Vintage Press, Lubbock, Texas
13. De Laet JE. Parsimony and the problem of inapplicables in sequence data. Parsimony, Phylogeny, and Genomics 2005, 81-116. Albert VA. In, Ed, Oxford University Press, Oxford, pp
14. Dumitrescu D. Recherches morphologiques sur l'appareil digestif (intestin moyen) des Gonyleptomorphi (Arachnida, Opilionida). Travaux du Muséum d'Histoire Naturelle Grigore Antipa 1976, 17:17-30.
15. Dunlop JA. Paleontology. Harvestmen: The Biology of Opiliones 2007, 247-265. Pinto-da-Rocha RMachado GGiribet G. In, Eds, Harvard University Press, Cambridge, MA, pp
16. Dunlop JA, Anderson LI. A fossil harvestman (Arachnida, Opiliones) from the Mississippian of East Kirkton, Scotland. J. Arachnol. 2005, 33:482-489.
17. Dunlop JA, Anderson LI, Kerp H, Hass H. Preserved organs of Devonian harvestmen. Nature 2003, 425:916.
18. Dunlop JA, Anderson LI, Kerp H, Hass H. A harvestman (Arachnida: Opiliones) from the Early Devonian Rhynie cherts, Aberdeenshire, Scotland. Trans. R. Soc. Edinb. Earth Sci. 2004, 94:341-354. for 2003
19. Dunlop JA, Tetlie OE, Prendini L. Reinterpretation of the Silurian scorpion Proscorpius osborni (Whitfield): Integrating data from Palaeozoic and Recent scorpions. Palaeontology 2008, 51:303-320.
20. Edgecombe GD, Giribet G. A century later-a total evidence re-evaluation of the phylogeny of scutigeromorph centipedes (Myriapoda: Chilopoda). Invertebr. Syst. 2006, 20:503-525.
21. Farris JS, Albert VA, Källersjö M, Lipscomb D, Kluge AG. Parsimony jackknifing outperforms neighbor-joining. Cladistics 1996, 12:99-124.
22. Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 1985, 39:783-791.
23. Forster RR. The New Zealand harvestmen (Sub-order Laniatores). Canterbury Mus. Bull. 1954, 2:1-329.
24. Giribet G. Filogenia molecular de Artrópodos basada en la secuencia de genes ribosomales 1997, PhD thesis, Departament de Biologia Animal, Universitat de Barcelona, Barcelona
25. Giribet G. Exploring the behavior of POY, a program for direct optimization of molecular data. Cladistics 2001, 17:S60-S70.
26. Giribet G. Karripurcellia, a new pettalid genus (Arachnida: Opiliones: Cyphophthalmi) from Western Australia, with a cladistic analysis of the family Pettalidae. Invertebr. Syst. 2003, 17:387-406.
27. Giribet G. Efficient tree searches with available algorithms. Evol. Bioinform. 2007, 3:1-16.
28. Giribet G, Boyer SL. A cladistic analysis of the cyphophthalmid genera (Opiliones, Cyphophthalmi). J. Arachnol. 2002, 30:110-128.
29. Giribet G, Dunlop JA. First identifiable Mesozoic harvestman (Opiliones: Dyspnoi) from Cretaceous Burmese amber. Proc. R. Soc. B 2005, 272:1007-1013.
30. Giribet G, Kury AB. Phylogeny and Biogeography. Harvestmen: The Biology of Opiliones 2007, 62-87. Pinto-da-Rocha R, Machado GGiribet G. In, Eds, Harvard University Press, Cambridge, MA, pp
31. Giribet G, Prieto CE. A new Afrotropical Ogovea (Opiliones, Cyphophthalmi) from Cameroon, with a discussion on the taxonomic characters in the family Ogoveidae. Zootaxa 2003, 329:1-18.
32. Giribet G, Rambla M, Carranza S, Baguñà J, Riutort M, Ribera C. Phylogeny of the arachnid order Opiliones (Arthropoda) inferred from a combined approach of complete 18S and partial 28S ribosomal DNA sequences and morphology. Mol. Phylogenet. Evol. 1999, 11:296-307.
33. Giribet G, Edgecombe GD, Wheeler WC, Babbitt C. Phylogeny and systematic position of Opiliones: a combined analysis of chelicerate relationships using morphological and molecular data. Cladistics 2002, 18:5-70.
34. Giribet G, Tsurusaki N, Boyer SL. Confirmation of the type locality and the distributional range of Suzukielus sauteri (Opiliones, Cyphophthalmi) in Japan. Acta Arachnologica 2006, 55:87-90.
35. Giribet G, Sharma PP, Bastawade DB. A new genus and species of Cyphophthalmi (Arachnida: Opiliones) from the north-eastern states of India. Zool. J. Linn. Soc. 2007, 151:663-670.
36. Goldberg J, Trewick SA, Paterson AM. Evolution of New Zealand's terrestrial fauna: a review of molecular evidence. Philos. Trans. R. Soc. Lond. B Biol. Sci. 2008, 363:3319-3334.
37. Goloboff PA. Analyzing large data sets in reasonable times: solutions for composite optima. Cladistics 1999, 15:415-428.
38. Goloboff PA. Techniques for analyzing large data sets. Techniques in Molecular Systematics and Evolution 2002, 70-79. DeSalle RGiribet GWheeler W. In, Eds, Birkhäuser Verlag, Basel, pp
39. González-Sponga MA. Arácnidos de Venezuela: una nueva familia, dos nuevos géneros y dos nuevas especies de Opiliones Laniatores. Acta Biol. Venez. 1997, 17:51-58.
40. Grandcolas P, Murienne J, Robillard T, DeSutter-Grandcolas L, Jourdan H, Guilbert E. New Caledonia: a very old Darwinian island? Philos. Trans. R. Soc. Lond. B Biol. Sci. 2008, 363:3309-3317.
41. Gruber J. Weberknechte der Familien Sironidae und Trogulidae aus der Türkei (Opiliones, Arachnida). Revue de la Faculte des Sciences de l'Universite d'Istanbul 1969, 34:75-88.
42. Gruber J. Redescription of Ceratolasma tricantha Goodnight and Goodnight, with notes on the family Ischyropsalidae (Opiliones, Palpatores). J. Arachnol. 1978, 6:105-124.
43. Hunt GS. Taxonomic value of spiracle microstructure in the Megalopsalididae (Opiliones, Phalangioidea). Acta Zoologica Fennica 1990, 190:187-194.
44. Hunt GS. A preliminary phylogenetic analysis of Australian Triaenonychidae (Arachnida: Opiliones). Rev. Suisse Zool. Proceedings of the XIIIth International Congress of Arachnology, Geneva 1996, 295-308. Mahnert V. vol. hors série I, pp, In, Ed, 3-8 September 1995
45. Hunt GS, Cokendolpher JC. Ballarrinae, a new subfamily of harvestmen from the southern hemisphere (Arachnida, Opiliones, Neopilionidae). Rec. Aust. Mus. 1991, 43:131-169.
46. Juberthie C. Révision du genre Parasiro (Opilions, Sironidae) et descriptions de Parasiro minor n. sp. Bulletin du Muséum, 2e série 1958, 30:159-166.
47. Juberthie C, Massoud Z. Biogéographie, taxonomie et morphologie ultrastructurale des opilions cyphophthalmes. Rev. Écol. Biol. Sol 1976, 13:219-231.
48. Katoh K, Misawa K, Kuma K, Miyata T. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 2002, 30:3059-3066.
49. Kury AB. The false Cranainae of the Brazilian Atlantic forest (Opiliones, Gonyleptidae). Trop Zool 1992, 5:279-291.
50. Kury AB. Análise filogenética de Gonyleptoidea (Arachnida, Opiliones, Laniatores) 1993, PhD thesis, Universidade de São Paulo, São Paulo
51. Kury AB. Early lineages of Gonyleptidae (Arachnida Opiliones Laniatores). Trop Zool 1994a, 7:343-353.
52. Kury AB. The genus Yania and other presumed Tricommatidae from South American highlands (Opiliones, Cranaidae, Prostygninae). Revue Arachnologique 1994b, 10:137-145.
53. Kury AB. A new subfamily of Agoristenidae, with comments on suprageneric relationships of the family (Arachnida, Opiliones, Laniatores). Trop Zool 1997a, 10:333-346.
54. Kury AB. The genera Saramacia Roewer and Syncranaus Roewer, with notes on the status of the Manaosbiidae (Opiliones, Laniatores). Boletim do Museu Nacional, N.S. Zoologia, Rio de Janeiro 1997b, 374:1-22.
55. Kury AB. Annotated catalogue of the Laniatores of the New World (Arachnida, Opiliones). Revista Ibérica de Aracnología Volumen especial monográfico 2003, 1:1-337.
56. Kury AB, Pérez GA. A new family of Laniatores from northwestern South America (Arachnida, Opiliones). Revista Ibérica de Aracnología 2002, 6:3-11.
57. Landis CA, Campbell HJ, Begg JG, Mildenhall DC, Paterson AM, Trewick SA. The Waipounamu Erosion Surface: questioning the antiquity of the New Zealand land surface and terrestrial fauna and flora. Geol. Mag. 2008, 145:173-197.
58. Loman JCC. On the classification of Opiliones. Tijd. ned. dierk. Vereen 1903, 8:62-66.
59. Mallatt J, Giribet G. Further use of nearly complete 28S and 18S rRNA genes to classify Ecdysozoa: 37 more arthropods and a kinorhynch. Mol. Phylogenet. Evol. 2006, 40:772-794.
60. Martens J. Genitalmorphologie, System und Phylogenie der Weberknechte (Arachnida, Opiliones). Entomologica Germanica, Zeitschrift für das Gesamtgebiet der wissenschaftlichen Entomologie 1976, 3:51-68.
61. Martens J. Versuch eines Phylogenetischen Systems der Opiliones. Proceedings 8th International Congress of Arachnology, Vienna 1980, 355-360. Gruber J. In, Ed, Verhandlungen. Verlag H. Egerman, Vienna, Austria, pp
62. Martens J. Die Grossgliederung der Opiliones und die Evolution der Ordnung (Arachnida). Actas X Congr. Int. Arachnol., Jaca 1986, 1:289-310.
63. Martens J. Harvestmen from the Caucasus (Arachnida, Opiliones, Nemastomatidae). Senckenbergiana biologica 2006, 86:145-210.
64. Martens J, Hoheisel U, Götze M. Vergleichende Anatomie der Legeröhren der Opiliones als Beitrag zur Phylogenie der Ordnung (Arachnida). Zoologische Jahrbücher, Abteilung für Anatomie und Ontogenie der Tiere 1981, 105:13-76.
65. Maury EA. Triaenonychidae sudamericanos. VI. Tres nuevas especies del género Nuncia Loman 1902 (Opiliones, Laniatores). Bol. Soc. Biol. Concepción, Chile 1990, 61:103-119.
66. McGlone MS. Goodbye Gondwana. J. Biogeogr. 2005, 32:739-740.
67. de Mello-Leitão CF. Famílias, subfamília, espécies e gêneros novos de opiliões e notas de sinonímia. Boletim do Museu Nacional Nova Série, Zoologia, Rio de Janeiro 1949, 94:1-33.
68. Mendes AC, Kury AB. Intercontinental Triaenonychidae-the case of Ceratomontia (Opiliones, Insidiatores). J. Arachnol. 2008, 36:273-279.
69. Murienne J, Giribet G. The Iberian Peninsula: ancient history of a hot spot of mite harvestmen (Arachnida: Opiliones: Cyphophthalmi: Sironidae) diversity. Zool. J. Linn. Soc. 2009, 156:785-800.
70. Murienne J, Karaman I, Giribet G. Explosive evolution of an ancient group of Cyphophthalmi (Arachnida: Opiliones) in the Balkan Peninsula. J. Biogeogr. 2009, 10.1111/j.1365-2699.2009.02180.x, doi
71. Orrico VGD, Kury AB. A cladistic analysis of the Stygnicranainae Roewer, 1913 (Arachnida, Opiliones, Cranaidae)-where do longipalp cranaids belong? Zool. J. Linn. Soc. 2009, 157:470-494.
72. Pérez González A. Revisão sistemática e análise filogenética de Stygnommatidae (Arachnida: Opiliones: Laniatores) 2006, PhD thesis, Museu Nacional, Universidade Federal de Rio de Janeiro, Rio de Janeiro
73. Pinto-da-Rocha R. Systematic review of the Neotropical family Stygnidae (Opiliones, Laniatores, Gonyleptoidea). Arquivos de Zoologia 1997, 33:163-342.
74. Pinto-da-Rocha R. Systematic review and cladistic analysis of the Caelopyginae (Opiliones, Gonyleptidae). Arquivos de Zoologia, São Paulo 2002, 36:357-464.
75. Pinto-da-Rocha R, Giribet G. Taxonomy. Harvestmen: The Biology of Opiliones 2007, 88-246. Pinto-da-Rocha R, Machado GGiribet G. Eds, Harvard University Press, Cambridge, MA, pp
76. Pinto-da-Rocha R, Kury AB. Phylogenetic analysis of Santinezia with description of five new species (Opiliones, Laniatores, Cranaidae). J. Arachnol. 2003a, 31:173-208.
77. Pinto-da-Rocha R, Kury AB. Third species of Guasiniidae (Opiliones, Laniatores) with comments on familial relationships. J. Arachnol. 2003b, 31:394-399.
78. Pinto-da-Rocha R, da Silva MB, Bragagnolo C. Faunistic similarity and historic biogeography of the harvestmen of southern and southeastern Atlantic rain forest of Brazil. J. Arachnol. 2005, 33:290-299.
79. Harvestmen: The Biology of Opiliones 2007, Pinto-da-Rocha RMachado GGiribet G. Eds, Harvard University Press, Cambridge, MA
80. Modeltest 3.7. Program and documentation available at darwin.uvigo.es 2005, Posada D. Vigo
81. Posada D, Buckley T. Model selection and model averaging in phylogenetics: advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests. Syst. Biol. 2004, 53:793-808.
82. Posada D, Crandall KA. MODELTEST: testing the model of DNA substitution. Bioinformatics 1998, 14:817-818.
83. Rambla M. Maiorerus randoi n. gen., n. sp., the first Laniatorid from a Canary Island cave (Opiliones, Phalangodidae). Mémoires de Biospéologie 1993, 20:177-182.
84. Rambla M. Un nouveau Cyphophthalme du sud-est asiatique, Fangensis leclerci n. gen. n. sp. (Opiliones, Sironidae). Mémoires de Biospéologie 1994, 21:109-114.
85. Sanderson MJ. A nonparametric approach to estimating divergence times in the absence of rate constancy. Mol. Biol. Evol. 1997, 14:1218-1231.
86. Sanderson MJ. Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach. Mol. Biol. Evol. 2002, 19:101-109.
87. Sanderson MJ. r8s: inferring absolute rates of molecular evolution and divergence times in the absence of a molecular clock. Bioinformatics 2003, 19:301-302.
88. Schönhofer AL, Martens J. Revision of the genus Trogulus Latreille: the Trogulus coriziformis species-group of the western Mediterranean (Opiliones: Trogulidae). Invertebr. Syst. 2008, 22:523-554.
89. Shultz JW, Regier JC. Caddo agilis and C. pepperella (Opiliones, Caddidae) diverged phylogenetically before acquiring their disjunct, sympatric distributions in Japan and North America. J. Arachnol. 1998, 37:328-240.
90. Schwendinger PJ, Giribet G. The systematics of the south-east Asian genus Fangensis Rambla (Opiliones: Cyphophthalmi: Stylocellidae). Invertebr. Syst. 2005, 19:297-323.
91. Schwendinger PJ, Martens J. Penis morphology in Oncopodidae (Opiliones, Laniatores): Evolutionary trends and relationships. J. Arachnol. 2002, 30:425-434.
92. Schwendinger PJ, Giribet G, Steiner H. A remarkable new cave-dwelling Stylocellus (Opiliones, Cyphophthalmi) from Peninsular Malaysia, with a discussion on taxonomic characters in the family Stylocellidae. J. Nat. Hist. 2004, 38:1421-1435.
93. Sharma P, Giribet G. A new Troglosiro species (Opiliones, Cyphophthalmi, Troglosironidae) from New Caledonia. Zootaxa 2005, 1053:47-60.
94. Sharma P, Giribet G. A new Pettalus species (Opiliones, Cyphophthalmi, Pettalidae) from Sri Lanka with a discussion on the evolution of eyes in Cyphophthalmi. J. Arachnol. 2006, 34:331-341.
95. Sharma P, Giribet G. A relict in New Caledonia: Phylogenetic relationships of the family Troglosironidae (Opiliones: Cyphophthalmi). Cladistics 2009a, 25:279-294.
96. Sharma P, Giribet G. Sandokanid phylogeny based on eight molecular markers-the evolution of a southeast Asian endemic family of Laniatores (Arachnida, Opiliones). Mol. Phylogenet. Evol. 2009b, 52:432-447.
97. Sharma PP, Giribet G. The family Troglosironidae (Opiliones: Cyphophthalmi) of New Caledonia. Zoologia Neocaledonica 7 2009c, Biodiversity Studies in New Caledonia, Paris, pp. 83-123
98. Shear WA. The opilionid family Caddidae in North America, with notes on species from other regions (Opiliones, Palpatores, Caddoidea). J. Arachnol. 1975, 2:65-88.
99. Shear WA. Fumontana deprehendor n. gen., n. sp., the first triaenonychid opilionid from eastern North America (Opiliones: Laniatores: Triaenonychidae). J. Arachnol. 1977, 3:177-183.
100. Shear WA. A cladistic analysis of the opilionid superfamily Ischyropsalidoidea, with descriptions of the new family Ceratolasmatidae, the new genus Acuclavella, and four new species. Am. Mus. Novit 1986, 2844:1-29.
101. Shear WA, Gruber J. The opilionid subfamily Ortholasmatinae (Opiliones, Troguloidea, Nemastomatidae). Am. Mus. Novit 1983, 2757:1-65.
102. Shultz JW. Evolutionary morphology and phylogeny of Arachnida. Cladistics 1990, 6:1-38.
103. Shultz JW. Phylogeny of Opiliones (Arachnida): an assessment of the "Cyphopalpatores" concept. J. Arachnol. 1998, 26:257-272.
104. Shultz JW. A phylogenetic analysis of the arachnid orders based on morphological characters. Zool. J. Linn. Soc. 2007, 150:221-265.
105. Shultz JW, Cekalovic T. First species of Austropsopilio (Opiliones, Caddoidea, Caddidae) from South America. J. Arachnol. 2003, 31:20-27.
106. Shultz JW, Cekalovic T. First species of Hesperopilio (Opiliones, Caddoidea, Caddidae) from South America. J. Arachnol. 2006, 34:46-50.
107. Shultz JW, Regier JC. Phylogenetic analysis of Phalangida (Arachnida, Opiliones) using two nuclear protein-encoding genes supports monophyly of Palpatores. J. Arachnol. 2001, 29:189-200.
108. Stamatakis A. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 2006, 22:2688-2690.
109. Stamatakis A, Hoover P, Rougemont J. A rapid bootstrap algorithm for the RAxML Web servers. Syst. Biol. 2008, 57:758-771.
110. Starega W. An annotated check-list of Afrotropical harvestmen, excluding the Phalangiidae (Opiliones). Ann. Natal Mus. 1992, 33:271-336.
111. Thomas SM, Hedin M. Multigenic phylogeographic divergence in the paleoendemic southern Appalachian opilionid Fumontana deprehendor Shear (Opiliones, Laniatores, Triaenonychidae). Mol. Phylogenet. Evol. 2008, 46:645-658.
112. Trewick SA, Paterson AM, Campbell HJ. Hello New Zealand. J. Biogeogr. 2007, 34:1-6.
113. Varón A, Vinh LS, Bomash I, Wheeler WC. 2007, http://research.amnh.org/scicomp/projects/poy.php, POY 4.0 Beta 1983 American Museum of Natural History. New York
114. Wheeler WC. Optimization alignment: the end of multiple sequence alignment in phylogenetics? Cladistics 1996, 12:1-9.
115. Wheeler WC, Hayashi CY. The phylogeny of extant chelicerate orders. Cladistics 1998, 14:173-192.