Diversity and antimicrobial activities of surface-attached marine bacteria from Sydney Harbour, Australia

Microbiological Research

Volumn 165, Issue 4, 2010, Pages 300-311

  Wilson, George S ^a   Raftos, David A ^a   Corrigan, Shannon L ^a   Nair, Sham V ^a  

^a MACQUARIE UNIVERSITY   (Australia)

Author keywords

Antimicrobial activity; Culturable; Distinct phylogenetic clade; Marine bacteria; Marine surfaces

Indexed keywords

16S RIBOSOMAL RNA; ANTI-MICROBIAL ACTIVITY; ANTIMICROBIAL COMPOUNDS; AUSTRALIA; CULTURABLE; GEOGRAPHIC LOCATION; MARINE BACTERIUM; MARINE ECOSYSTEM; MICROBIAL COMMUNITIES; MICROBIAL DIVERSITY; POLAR PHASE; POTENT ACTIVITY; PROTEOLYTIC DIGESTION; SUPERNATANTS; SYDNEY HARBOUR;

BACTERIOLOGY; BIOLOGY; ECOSYSTEMS; MOLECULES; RNA;

BACTERIA;

ANTIMICROBIAL ACTIVITY; BACTERIUM; BIOASSAY; MARINE ECOSYSTEM; MICROBIAL COMMUNITY; PHYLOGENETICS; PHYLOGENY; SPECIES DIVERSITY;

AUSTRALIA; NEW SOUTH WALES; SYDNEY HARBOUR;

BACTERIA (MICROORGANISMS);

ANTIINFECTIVE AGENT; SEA WATER;

ANTIBIOSIS; ARTICLE; AUSTRALIA; BACTERIUM; BACTERIUM ADHERENCE; BIODIVERSITY; CLASSIFICATION; ISOLATION AND PURIFICATION; METABOLISM; MICROBIOLOGY; PHYLOGENY;

ANTI-BACTERIAL AGENTS; ANTIBIOSIS; BACTERIA; BACTERIAL ADHESION; BIODIVERSITY; NEW SOUTH WALES; PHYLOGENY; SEAWATER;

EID: 77954470732     PISSN: 09445013     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.micres.2009.05.007     Document Type: Article

References (26)

1. Bowman J.P. Bioactive compound synthetic capacity and ecological significance of marine bacterial genus Pseudoalteromonas. Marine Drugs 2007, 5(4):220-241.
2. Bruno W.J., Socci N.D., Halpern A.L. Weighted neighbor joining: a likelihood-based approach to distance-based phylogeny reconstruction. Molecular Biology and Evolution 2000, 17(1):189-197.
3. Burgess J.G., Jordan E.M., Bregu M., Mearns-Spragg A., Boyd K.G. Microbial antagonism: a neglected avenue of natural products research. Journal of Biotechnology 1999, 70:27-32.
4. Cole J.R., Chai B., Farris R.J., Wang Q., Kulam-Syed-Mohideen A.S., McGarrell D.M., Bandela A.M., Cardenas E., Garrity G.M., Tiedje J.M. The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data. Nucleic Acids Research 2007, 35:d169-d172.
5. Dunne W.M. Bacterial adhesion: seen any good biofilms lately. Clinical Microbiology Reviews 2002, 15(2):155-166.
6. Egan S., Thomas T., Kjelleberg S. Unlocking the diversity and biotechnological potential of marine surface associated microbial communities. Current Opinion in Microbiology 2008, 11:219-225.
7. Garrity G.M., Lilburn T.G., Cole J.R., Harrison S.H., Euzeby J., Tindall B.J. Taxonomic outline of bacteria and Archaea. Michigan State University Board of Trustees 2007.
8. Glasby T.M. Differences between subtidal epibiota on pier pilings and rocky reefs at marinas in Sydney, Australia. Estuarine, Coastal and Shelf Science 1999, 48:281-290.
9. Glasby T.M., Connell S.D., Holloway M.G., Hewitt C.L. Nonindigenous biota on artificial structures: could habitat creation facilitate biological invasions?. Marine Biology 2007, 151:887-895.
10. Hentschel U., Schmid M., Wagner M., Fieseler L., Gernert C., Hacker J. Isolation and phylogenetic analysis of bacteria with antimicrobial activities from the Mediterranean sponges Aplysina aerophoba and Aplysina cavernicola. FEMS Microbiology Ecology 2001, 35:305-312.
11. James S.G., Holmstrom C., Kjelleberg S. Purification and characterization of a novel antibacterial protein from the marine bacterium D2. Applied and Environmental Microbiology 1996, 62(8):2783-2788.
12. Kanagasabhapathy M., Sasaki H., Nagata S. Phylogenetic identification of epibiotic bacteria possessing antimicrobial activities isolated from red algal species of Japan. World Journal of Microbiology and Biotechnology 2008, 24:2315-2321.
13. Lemos M.L., Toranzo A.E., Barja J.L. Antibiotic activity of epiphytic bacteria isolated from intertidal seaweeds. Microbial Ecology 1985, 11(2):149-163.
14. Long R.A., Azam F. Antagonistic interactions among marine pelagic bacteria. Applied and Environmental Microbiology 2001, 67(11):4975-4983.
15. Longeon A., Peduzzi J., Barthelemy M., Corre S., Nicolas J.-L., Guyot M. Purification and partial identification of novel antimicrobial protein from marine bacterium Pseudoalteromonas species strain X153. Marine Biotechnology 2004, 6:633-641.
16. Nair S., Simidu U. Distribution and significance of heterotrophic marine bacteria with antibacterial activity. Applied and Environmental Microbiology 1987, 53(12):2957-2962.
17. Rao D., Webb J.S., Kjelleberg S. Competitive interactions in mixed-species biofilms containing the marine bacterium Pseudoalteromonas tunicata. Applied and Environmental Microbiology 2005, 71(4):1729-1736.
18. Rohwer F., Seguritan V., Azam F., Knowlton N. Diversity and distribution of coral-associated bacteria. Marine Ecology Progress Series 2002, 243:1-10.
19. Smith S.M., Beattie A.J., Gillings M.R., Holley M.P., Stow A.J., Turnbull C.L., Wilson P.D., Briscoe D.A. An enhanced miniaturized assay for antimicrobial prospecting. Journal of Microbiological Methods 2008, 72:103-106.
20. Taylor M.W., Schupp P.J., Dahllof I., Kjelleberg S., Steinberg P.D. Host specificity in marine sponge-associated bacteria, and potential implications for marine microbial diversity. Environmental Microbiology 2004, 6(2):121-130.
21. Taylor M.W., Schupp P.J., Nys R., Kjelleberg S., Steinberg P.D. Biogeography of bacteria associated with the marine sponge Cymbastela concentrica. Environmental Microbiology 2005, 7(3):419-433.
22. Wang Q., Garrity G.M., Tiedje J.M., Cole J.R. Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Applied and Environmental Microbiology 2007, 73(16):5261-5267.
23. Webster N.S., Bourne D. Bacterial community structure associated with the Antarctic soft coral, Alcyoniumantarcticum antarcticum. FEMS Microbiology Ecology 2007, 59:81-94.
24. Wienbauer M.G., Fritz I., Wenderoth D.F., Hofle M.G. Simultaneous extraction from bacterioplankton of total RNA and DNA suitable for quantitative structure and function analyses. Applied and Environmental Microbiology 2002, 68(3):1082-1087.
25. Yooseph S., Sutton G., Rusch D.B., Halpern A.L., Williamson S.J., Remington K., Eisen J.A., Heidelberg K.B., Manning G., Li W., Jaroszewski L., Cieplak P., Miller C.S., Li H., Mashiyama S.T., Joachimiak M.P., Belle C., Chandonia J.M., Soergel D.A., Zhai Y., Natarajan K., Lee S., Raphael B.J., Bafna V., Friedman R., Brenner S.E., Godzik A., Eisenberg D., Dixon J.E., Taylor S.S., Strausberg R.L., Frazier M., Venter J.C. The Sorcerer II Global Ocean sampling expedition: expanding the universe of protein families. PLOS Biology 2007, 5(3):e16.
26. Zheng L., Han X., Chen H., Lin W., Yan X. Marine bacteria associated with marine microorganisms: the potential antimicrobial resources. Annals of Microbiology 2005, 55(2):119-124.