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Volumn 68, Issue 3, 2002, Pages 1082-1087

Simultaneous extraction from bacterioplankton of total RNA and DNA suitable for quantitative structure and function analyses

(4) Weinbauer, Markus G a Fritz, Ingo a Wenderoth, Dirk F a Höfle, Manfred G a

a ROYAL NETHERLANDS INSTITUTE FOR SEA RESEARCH (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

CHEMICAL ANALYSIS; DNA; ENZYMES; RNA;

FRAGMENTS;

BACTERIA;

DNA; NITRITE REDUCTASE; RNA;

BACTERIOPLANKTON; DNA; EXTRACTION METHOD; RNA;

ARTICLE; BACTERIOPLANKTON; BACTERIUM ISOLATION; DNA EXTRACTION; DNA FINGERPRINTING; DNA STRUCTURE; GENE EXPRESSION; NONHUMAN; QUANTITATIVE ASSAY; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA EXTRACTION; RNA FINGERPRINTING; RNA STRUCTURE;

ANIMALS; BACTERIA; DNA FINGERPRINTING; DNA, BACTERIAL; DNA, RIBOSOMAL; ECOSYSTEM; FRESH WATER; GENES, RRNA; PLANKTON; POLYMERASE CHAIN REACTION; POLYMORPHISM, SINGLE-STRANDED CONFORMATIONAL; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, BACTERIAL; RNA, MESSENGER; RNA, RIBOSOMAL, 16S;

BACTERIA (MICROORGANISMS); NEGIBACTERIA; POSIBACTERIA;

EID: 0036199576 PISSN: 00992240 EISSN: None Source Type: Journal
DOI: 10.1128/AEM.68.3.1082-1087.2002 Document Type: Article

Times cited : (106)

References (27)

1
- 0028946084
- Phylogenetic identification and in situ detection of individual microbial cells without cultivation
- (1995) Microbiol. Rev. , vol.59 , pp. 143-169
- Amann, R.I.¹ Ludwig, W.² Schleifer, K.-H.³

2
- 3543006508
- Growth rate regulation of rRNA content of a marine Synechococcus (cyanobacterium) strain
- (1998) Appl. Environ. Microbiol. , vol.64 , pp. 3346-3351
- Binder, B.J.¹ Liu, Y.C.²

3
- 0003221892
- Extraction of total RNA from bacterioplankton
- A. Akkermans, J. van Elsas, and F. de Bruijn (ed.). Kluwer Academic Publishers, Dordrecht, The Netherlands
- (1999) Molecular microbial ecology manual , pp. 1-9
- Dominik, K.¹ Höfie, M.G.²

4
- 0242513076
- Extraction of ribosomal RNA and genomic DNA from soil for studying the diversity of the indigenous bacterial community
- (1998) J. Microbiol. Methods , vol.32 , pp. 21-29
- Duarte, G.F.¹ Rosado, A.S.² Seldin, L.³ Keijzer-Wolters, A.C.⁴ Van Elsas, J.D.⁵

5
- 0031902077
- Monitoring impact of a pesticide treatment on bacterial soil communities by metabolic and genetic fingerprinting in addition to conventional testing procedures
- (1998) Appl. Environ. Microbiol. , vol.64 , pp. 2814-2821
- Engelen, B.¹ Meinken, K.² Von Wintzingerode, F.³ Heuer, H.⁴ Malkomes, H.-P.⁵ Backhaus, H.⁶

6
- 0003705219
- Academic Press, San Diego, Calif.
- (1993) RNA methodologies. A laboratory guide for isolation and characterization
- Farrell, R.E.¹

7
- 0000615869
- Extraction from natural planktonic microorganisms of DNA suitable for molecular biological studies
- (1988) Appl. Environ. Microbiol. , vol.54 , pp. 1426-1429
- Fuhrman, J.A.¹ Comeau, D.E.² Hagström, Å.³ Chan, A.M.⁴

8
- 0033754255
- Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of actinobacteria
- (2000) Appl. Environ. Microbiol. , vol.66 , pp. 5053-5065
- Glöckner, F.O.¹ Zaichikov, E.² Belkova, N.³ Denissova, L.⁴ Pernthaler, J.⁵ Pernthaler, A.⁶ Amann, R.⁷

9
- 0034468557
- Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition
- (2000) Appl. Environ. Microbiol. , vol.66 , pp. 5488-5491
- Griffiths, R.I.¹ Whiteley, A.S.² O'Donnell, A.G.³ Bailey, M.J.⁴

10
- 0026616321
- Bacterioplankton community structure and dynamics after large-scale release of nonindigenous bacteria as revealed by low-molecular-weight-RNA analysis
- (1992) Appl. Environ. Microbiol. , vol.58 , pp. 3387-3394
- Höfle, M.G.¹

11
- 0003799245
- ASM Press, Washington, D.C.
- (1997) Manual of environmental microbiology
- Hurst, C.J.¹ Knudsen, G.R.² McInerney, M.J.³ Stetzenbach, L.D.⁴ Walter, M.V.⁵

12
- 0030039040
- Bacterioplankton RNA, DNA, protein content and relationships to rates of thymidine and leucine incorporation
- (1996) Aquat. Microb. Ecol. , vol.10 , pp. 87-95
- Jeffrey, W.H.¹ Von Haven, R.² Hoch, M.P.³ Coffin, R.B.⁴

13
- 0025784662
- Simultaneous and rapid isolation of bacterial and eukaryotic DNA and RNA: A new approach for isolating DNA
- (1991) BioTechniques , vol.11 , pp. 94-101
- Majumdar, D.¹ Avissar, Y.J.² Wyche, J.H.³

14
- 0030835641
- An effective method of RNA extraction from bacteria refractory to disruption, including mycobacteria
- (1997) Nucleic Acids Res. , vol.25 , pp. 675-676
- Mangan, J.A.¹ Sole, K.M.² Mitchison, D.A.³ Butcher, P.D.⁴

15
- 0001868071
- Denaturing gradient gel electrophoresis of PCR-amplified 16S rDNA - A new molecular approach to analyse the genetic diversity of mixed microbial communities
- A. Akkermans, J. van Elsas, and F. de Bruijn (ed.). Kluwer Academic Publishers, Dordrecht, The Netherlands
- (1996) Molecular microbial ecology manual , pp. 1-23
- Muyzer, G.¹ Hottenträger, S.² Teske, A.³ Wawer, C.⁴

16
- 0008661871
- Extractions of DNA and RNA from aquatic environments
- J. T. Trevors and J. D. van Elsas (ed.). Springer, Berlin, Germany
- (1995) Nucleic acids in the environment , pp. 153-177
- Paul, J.H.¹ Pichard, S.L.²

17
- 0025919297
- Detection of gene expression in genetically engineered microorganisms and natural phytoplankton populations in the marine environment by mRNA analysis
- (1991) Appl. Environ. Microbiol. , vol.57 , pp. 1721-1727
- Pichard, S.L.¹ Paul, J.H.²

18
- 0031764376
- A new approach to utilize PCR-singlestrand-conformation polymorphism for 16S rRNA gene-based microbial community analysis
- (1998) Appl. Environ. Microbiol. , vol.64 , pp. 4870-4876
- Schwieger, F.¹ Tebbe, C.C.²

19
- 0033760479
- Quantitative analysis of small-subunit rRNA genes in mixed microbial populations via 5′-nuclease assays
- (2000) Appl. Environ. Microbiol. , vol.66 , pp. 4605-4614
- Suzuki, M.T.¹ Taylor, L.T.² DeLong, E.F.³

20
- 0029667164
- Distribution of sulfate-reducing bacteria in a stratified fjord (Mariager Fjord, Denmark) as evaluated by most-probable-number counts and denaturing gradient gel electrophoresis of PCR-amplified ribosomal DNA fragments
- (1996) Appl. Environ. Microbiol. , vol.62 , pp. 1405-1415
- Teske, A.¹ Wawer, C.² Muyzer, G.³ Ramsing, N.B.⁴

21
- 0027443431
- Antibody and DNA probes for detection of nitrate reductase in seawater
- (1993) J. Gen. Microbiol. , vol.139 , pp. 2285-2293
- Ward, B.B.¹ Cockcroft, A.R.² Kilpatrick, K.A.³

22
- 0002138974
- Methods for extracting RNA or ribosomes from microbial mats and cultivated microorganisms
- A. Akkermans, J. van Elsas, and F. de Bruijn (ed.). Kluwer Academic Publishers, Dordrecht, The Netherlands
- (1995) Molecular microbial ecology manual , pp. 1-14
- Ward, D.M.¹ Ruff-Roberts, A.L.² Weller, R.³

23
- 0029077890
- Genetic diversity of Desulfovibrio spp. in environmental samples analyzed by denaturing gradient gel electrophoresis of [NiFe] hydrogenase gene fragments
- (1995) Appl. Environ. Microbiol. , vol.61 , pp. 2203-2210
- Wawer, C.¹ Muyzer, G.²

24
- 4243583936
- Quantification of nucleic acids from aquatic environments by using green-fluorescent dyes and microtiter plates
- A. Akkermans, J. van Elsas, and F. de Bruijn (ed.), in press. Kluwer Academic Publishers, Dordrecht, The Netherlands
- Molecular microbial ecology manual, 5th supplement
- Weinbauer, M.G.¹ Höfle, M.G.²

25
- 0025731189
- 16S rRNA sequences of uncultivated hot spring cyanobacterial mat inhabitants retrieved as randomly primed cDNA
- (1991) Appl. Environ. Microbiol. , vol.57 , pp. 1146-1151
- Weller, R.¹ Weller, J.W.² Ward, D.M.³

26
- 0030748867
- Inhibition and facilitation of nucleic acid amplification
- (1997) Appl. Environ. Microbiol. , vol.63 , pp. 3741-3751
- Wilson, I.G.¹

27
- 0345195995
- Determination of microbial diversity in environmental samples: Pitfalls of PCR-based rRNA analysis
- (1997) FEMS Microbiol. Rev. , vol.21 , pp. 213-229
- Wintzingerode, F.¹ Göbel, U.B.² Stackebrandt, E.³

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