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Volumn 28, Issue 4, 2010, Pages 692-703

Gene structure analysis of rice ADP-ribosylation factors (OsARFs) and their mRNA expression in developing rice plants

Author keywords

ADP ribosylation factor (OsARF); Gene expression; Gene structure; In situ hybridization; Rice (Oryza sativa L.); RT PCR

Indexed keywords

ANIMALIA; ORYZA SATIVA;

EID: 77954427047     PISSN: 07359640     EISSN: 15729818     Source Type: Journal    
DOI: 10.1007/s11105-010-0200-6     Document Type: Article
Times cited : (13)

References (56)
  • 1
    • 0030140041 scopus 로고    scopus 로고
    • Early genes and auxin action
    • Abel S, Theologis A (1996) Early genes and auxin action. Plant Physiol 111: 9-17.
    • (1996) Plant Physiol , vol.111 , pp. 9-17
    • Abel, S.1    Theologis, A.2
  • 2
    • 0028556994 scopus 로고
    • Structure of the human ADP-ribosylation factor 1 complexed with GDP
    • Amor JC, Harrison DH, Kahn RA, Ringe D (1994) Structure of the human ADP-ribosylation factor 1 complexed with GDP. Nature 372: 704-708.
    • (1994) Nature , vol.372 , pp. 704-708
    • Amor, J.C.1    Harrison, D.H.2    Kahn, R.A.3    Ringe, D.4
  • 3
    • 0030891289 scopus 로고    scopus 로고
    • N-terminal hydrophobic residues of the G-protein ADP-ribosylation factor-1 insert into membrane phospholipids upon GDP to GTP exchange
    • Antonny B, BeraudDufour S, Chardin P, Chabre M (1997) N-terminal hydrophobic residues of the G-protein ADP-ribosylation factor-1 insert into membrane phospholipids upon GDP to GTP exchange. Biochemistry 36: 4675-4684.
    • (1997) Biochemistry , vol.36 , pp. 4675-4684
    • Antonny, B.1    Berauddufour, S.2    Chardin, P.3    Chabre, M.4
  • 4
    • 33846077122 scopus 로고    scopus 로고
    • Cloning and expression of cDNAs encoding ADP-ribosylation factor in carrot seedling
    • Asakura Y, Ishigaki E, Sugiyama R, Kurosaki F (2007) Cloning and expression of cDNAs encoding ADP-ribosylation factor in carrot seedling. Plant Sci 172: 189-195.
    • (2007) Plant Sci , vol.172 , pp. 189-195
    • Asakura, Y.1    Ishigaki, E.2    Sugiyama, R.3    Kurosaki, F.4
  • 5
    • 47649118745 scopus 로고    scopus 로고
    • Identification and characterization of novel senescence-associated genes from barley (Hordeum vulgare) primary leaves
    • Ay N, Clauss K, Barth O, Humbeck K (2008) Identification and characterization of novel senescence-associated genes from barley (Hordeum vulgare) primary leaves. Plant Biol 10: 121-135.
    • (2008) Plant Biol , vol.10 , pp. 121-135
    • Ay, N.1    Clauss, K.2    Barth, O.3    Humbeck, K.4
  • 6
    • 0026766151 scopus 로고
    • ADP-ribosylation factor is required for vesicular trafficking between the endoplasmic reticulum and the cis-Golgi compartment
    • Balch WE, Kahn RA, Schwaninger R (1992) ADP-ribosylation factor is required for vesicular trafficking between the endoplasmic reticulum and the cis-Golgi compartment. J Biol Chem 267: 13053-13061.
    • (1992) J Biol Chem , vol.267 , pp. 13053-13061
    • Balch, W.E.1    Kahn, R.A.2    Schwaninger, R.3
  • 7
    • 38749150383 scopus 로고    scopus 로고
    • Rab and Arl GTPase family members cooperate in the localization of the Golgi GCC185
    • Burguete AS, Fenn TD, Brunger AT, Pfeffer SR (2008) Rab and Arl GTPase family members cooperate in the localization of the Golgi GCC185. Cell 132: 286-298.
    • (2008) Cell , vol.132 , pp. 286-298
    • Burguete, A.S.1    Fenn, T.D.2    Brunger, A.T.3    Pfeffer, S.R.4
  • 9
    • 0033574449 scopus 로고    scopus 로고
    • Brefeldin A: The advantage of being uncompetitive
    • Chardin P, McCormick F (1999) Brefeldin A: the advantage of being uncompetitive. Cell 97: 153-155.
    • (1999) Cell , vol.97 , pp. 153-155
    • Chardin, P.1    McCormick, F.2
  • 10
    • 0033180113 scopus 로고    scopus 로고
    • The role of ARF and Rab GTPases in membrane transport
    • Chavrier P, Goud B (1999) The role of ARF and Rab GTPases in membrane transport. Curr Opin Cell Biol 11: 466-475.
    • (1999) Curr Opin Cell Biol , vol.11 , pp. 466-475
    • Chavrier, P.1    Goud, B.2
  • 11
    • 0027482720 scopus 로고
    • Selective amplification of additional members of the ADP-ribosylation factor (ARF) family: Cloning of additional human and Drosophila ARF-like genes
    • Clark J, Moore L, Krasinskas A, Way J, Battey J, Tamkun J, Kahn RA (1993) Selective amplification of additional members of the ADP-ribosylation factor (ARF) family: cloning of additional human and Drosophila ARF-like genes. Proc Natl Acad Sci U S A 90: 8952-8956.
    • (1993) Proc Natl Acad Sci U S A , vol.90 , pp. 8952-8956
    • Clark, J.1    Moore, L.2    Krasinskas, A.3    Way, J.4    Battey, J.5    Tamkun, J.6    Kahn, R.A.7
  • 13
    • 0034699445 scopus 로고    scopus 로고
    • Loosening of plant cell walls by expansins
    • Cosgrove DJ (2000) Loosening of plant cell walls by expansins. Nature 407: 321-326.
    • (2000) Nature , vol.407 , pp. 321-326
    • Cosgrove, D.J.1
  • 14
    • 0028372187 scopus 로고
    • Cloning and characterization of a tomato GTPase-like gene related to yeast and Arabidopsis genes involved in vesicular transport
    • Davies C (1994) Cloning and characterization of a tomato GTPase-like gene related to yeast and Arabidopsis genes involved in vesicular transport. Plant Mol Biol 24: 525-531.
    • (1994) Plant Mol Biol , vol.24 , pp. 525-531
    • Davies, C.1
  • 15
    • 33846326234 scopus 로고    scopus 로고
    • Auxin-mediated lateral root formation in higher plants
    • Fukaki H, Okushima Y, Tasaka M (2007) Auxin-mediated lateral root formation in higher plants. Int Rev Cytol 256: 111-137.
    • (2007) Int Rev Cytol , vol.256 , pp. 111-137
    • Fukaki, H.1    Okushima, Y.2    Tasaka, M.3
  • 16
    • 17144372270 scopus 로고    scopus 로고
    • Genes encoding ADP-ribosylation factors in Arabidopsis thaliana L. Heyn.; genome analysis and antisense suppression
    • Gebbie LK, Burn JE, Hocart CH, Williamson RE (2005) Genes encoding ADP-ribosylation factors in Arabidopsis thaliana L. Heyn.; genome analysis and antisense suppression. J Exp Bot 56: 1079-1091.
    • (2005) J Exp Bot , vol.56 , pp. 1079-1091
    • Gebbie, L.K.1    Burn, J.E.2    Hocart, C.H.3    Williamson, R.E.4
  • 18
    • 0028078228 scopus 로고
    • Molecular cloning and characterization of a cDNA encoding a small GTP-binding protein related to mammalian ADP-ribosylation factor from rice
    • Higo H, Kishimoto N, Saito A, K-i H (1994) Molecular cloning and characterization of a cDNA encoding a small GTP-binding protein related to mammalian ADP-ribosylation factor from rice. Plant Sci 100: 41-49.
    • (1994) Plant Sci , vol.100 , pp. 41-49
    • Higo, H.1    Kishimoto, N.2    Saito, A.3    K-i, H.4
  • 19
    • 65549124481 scopus 로고    scopus 로고
    • Transcript profiling reveals diverse roles of auxin-responsive genes during reproductive development and abiotic stress in rice
    • Jain M, Khurana JP (2009) Transcript profiling reveals diverse roles of auxin-responsive genes during reproductive development and abiotic stress in rice. FEBS J 276: 3148-3162.
    • (2009) FEBS J , vol.276 , pp. 3148-3162
    • Jain, M.1    Khurana, J.P.2
  • 20
    • 0026708135 scopus 로고
    • The amino terminus of ADP-ribosylation factor (ARF) is a critical determinant of ARF activities and is a potent and specific inhibitor of protein transport
    • Kahn RA, Randazzo P, Serafini T, Weiss O, Rulka C, Clark J, Amherdt M, Roller P, Orci L, Rothman JE (1992) The amino terminus of ADP-ribosylation factor (ARF) is a critical determinant of ARF activities and is a potent and specific inhibitor of protein transport. J Biol Chem 267: 13039-13046.
    • (1992) J Biol Chem , vol.267 , pp. 13039-13046
    • Kahn, R.A.1    Randazzo, P.2    Serafini, T.3    Weiss, O.4    Rulka, C.5    Clark, J.6    Amherdt, M.7    Roller, P.8    Orci, L.9    Rothman, J.E.10
  • 23
    • 0035809030 scopus 로고    scopus 로고
    • Cloning and expression analyses of cDNA encoding an ADP-ribosylation factor from wheat: Tissue-specific expression of wheat ARF
    • Kobayashi-Uehara A, Shimosaka E, Handa H (2001) Cloning and expression analyses of cDNA encoding an ADP-ribosylation factor from wheat: tissue-specific expression of wheat ARF. Plant Sci 160: 535-542.
    • (2001) Plant Sci , vol.160 , pp. 535-542
    • Kobayashi-Uehara, A.1    Shimosaka, E.2    Handa, H.3
  • 24
    • 0033568607 scopus 로고    scopus 로고
    • GTP hydrolysis by arf-1 mediates sorting and concentration of Golgi resident enzymes into functional COPI vesicles
    • Lanoix J, Ouwendijk J, Lin CC, Stark A, Love HD, Ostermann J, Nilsson T (1999) GTP hydrolysis by arf-1 mediates sorting and concentration of Golgi resident enzymes into functional COPI vesicles. EMBO J 18: 4935-4948.
    • (1999) EMBO J , vol.18 , pp. 4935-4948
    • Lanoix, J.1    Ouwendijk, J.2    Lin, C.C.3    Stark, A.4    Love, H.D.5    Ostermann, J.6    Nilsson, T.7
  • 25
    • 0037008335 scopus 로고    scopus 로고
    • ADP-ribosylation factor 1 of Arabidopsis plays a critical role in intracellular trafficking and maintenance of endoplasmic reticulum morphology in Arabidopsis
    • Lee MH, Min MK, Lee YJ, Jin JB, Shin DH, Kim DH, Lee KH, Hwang I (2002) ADP-ribosylation factor 1 of Arabidopsis plays a critical role in intracellular trafficking and maintenance of endoplasmic reticulum morphology in Arabidopsis. Plant Physiol 129: 1507-1520.
    • (2002) Plant Physiol , vol.129 , pp. 1507-1520
    • Lee, M.H.1    Min, M.K.2    Lee, Y.J.3    Jin, J.B.4    Shin, D.H.5    Kim, D.H.6    Lee, K.H.7    Hwang, I.8
  • 27
    • 36849013111 scopus 로고    scopus 로고
    • Small GTP-binding proteins and their functions in plants
    • Ma QH (2007) Small GTP-binding proteins and their functions in plants. J Plant Growth Regul 26: 369-388.
    • (2007) J Plant Growth Regul , vol.26 , pp. 369-388
    • Ma, Q.H.1
  • 28
    • 34249823659 scopus 로고    scopus 로고
    • Multiple roles of ADP-ribosylation factor 1 in plant cells include spatially regulated recruitment of coatomer and elements of the Golgi matrix
    • Matheson LA, Hanton SL, Rossi M, Latijnhouwers M, Stefano G, Renna L, Brandizzi F (2007) Multiple roles of ADP-ribosylation factor 1 in plant cells include spatially regulated recruitment of coatomer and elements of the Golgi matrix. Plant Physiol 143: 1615-1627.
    • (2007) Plant Physiol , vol.143 , pp. 1615-1627
    • Matheson, L.A.1    Hanton, S.L.2    Rossi, M.3    Latijnhouwers, M.4    Stefano, G.5    Renna, L.6    Brandizzi, F.7
  • 29
    • 0033827695 scopus 로고    scopus 로고
    • The TITAN5 gene of Arabidopsis encodes a protein related to the ADP ribosylation factor family of GTP binding proteins
    • McElver J, Patton D, Rumbaugh M, Liu CM, Yang LJ, Meinke D (2000) The TITAN5 gene of Arabidopsis encodes a protein related to the ADP ribosylation factor family of GTP binding proteins. Plant Cell 12: 1379-1392.
    • (2000) Plant Cell , vol.12 , pp. 1379-1392
    • McElver, J.1    Patton, D.2    Rumbaugh, M.3    Liu, C.M.4    Yang, L.J.5    Meinke, D.6
  • 30
    • 33745434299 scopus 로고    scopus 로고
    • Sequencing multiple and diverse rice varieties. Connecting whole-genome variation with phenotypes
    • McNally KL, Bruskiewich R, Mackill D, Buell CR, Leach JE, Leung H (2006) Sequencing multiple and diverse rice varieties. Connecting whole-genome variation with phenotypes. Plant Physiol 141: 26-31.
    • (2006) Plant Physiol , vol.141 , pp. 26-31
    • McNally, K.L.1    Bruskiewich, R.2    Mackill, D.3    Buell, C.R.4    Leach, J.E.5    Leung, H.6
  • 31
    • 0029015710 scopus 로고
    • Structure and function of ARF proteins: Activators of cholera toxin and critical components of intracellular vesicular transport processes
    • Moss J, Vaughan M (1995) Structure and function of ARF proteins: activators of cholera toxin and critical components of intracellular vesicular transport processes. J Biol Chem 270: 12327-12330.
    • (1995) J Biol Chem , vol.270 , pp. 12327-12330
    • Moss, J.1    Vaughan, M.2
  • 32
    • 0032555493 scopus 로고    scopus 로고
    • Molecules in the ARF orbit
    • Moss J, Vaughan M (1998) Molecules in the ARF orbit. J Biol Chem 273: 21431-21434.
    • (1998) J Biol Chem , vol.273 , pp. 21431-21434
    • Moss, J.1    Vaughan, M.2
  • 33
    • 0032488847 scopus 로고    scopus 로고
    • Structure of the guanine nucleotide exchange factor Sec7 domain of human Arno and analysis of the interaction with ARF GTPase
    • Mossessova E, Gulbis JM, Goldberg J (1998) Structure of the guanine nucleotide exchange factor Sec7 domain of human Arno and analysis of the interaction with ARF GTPase. Cell 92: 415-423.
    • (1998) Cell , vol.92 , pp. 415-423
    • Mossessova, E.1    Gulbis, J.M.2    Goldberg, J.3
  • 34
    • 0036851186 scopus 로고    scopus 로고
    • Brefeldin A: Deciphering an enigmatic inhibitor of secretion
    • Nebenfuhr A, Ritzenthaler C, Robinson DG (2002) Brefeldin A: deciphering an enigmatic inhibitor of secretion. Plant Physiol 130: 1102-1108.
    • (2002) Plant Physiol , vol.130 , pp. 1102-1108
    • Nebenfuhr, A.1    Ritzenthaler, C.2    Robinson, D.G.3
  • 37
    • 0038366776 scopus 로고    scopus 로고
    • The GTPase ARF1p controls the sequence-specific vacuolar sorting route to the lytic vacuole
    • Pimpl P, Hanton SL, Taylor JP, Pinto-daSilva LL, Denecke J (2003) The GTPase ARF1p controls the sequence-specific vacuolar sorting route to the lytic vacuole. Plant Cell 15: 1242-1256.
    • (2003) Plant Cell , vol.15 , pp. 1242-1256
    • Pimpl, P.1    Hanton, S.L.2    Taylor, J.P.3    Pinto-Dasilva, L.L.4    Denecke, J.5
  • 39
    • 0029872276 scopus 로고    scopus 로고
    • Coat proteins and vesicle budding
    • Schekman R, Orci L (1996) Coat proteins and vesicle budding. Science 271: 1526-1533.
    • (1996) Science , vol.271 , pp. 1526-1533
    • Schekman, R.1    Orci, L.2
  • 40
    • 0025221221 scopus 로고
    • ADP ribosylation factor is an essential protein in Saccharomyces cerevisiae and is encoded by two genes
    • Stearns T, Kahn RA, Botstein D, Hoyt MA (1990) ADP ribosylation factor is an essential protein in Saccharomyces cerevisiae and is encoded by two genes. Mol Cell Biol 10: 6690-6699.
    • (1990) Mol Cell Biol , vol.10 , pp. 6690-6699
    • Stearns, T.1    Kahn, R.A.2    Botstein, D.3    Hoyt, M.A.4
  • 41
    • 70149098891 scopus 로고    scopus 로고
    • Gene nomenclature system for rice
    • CGSNL
    • Susan RM, CGSNL (2008) Gene nomenclature system for rice. Rice 1: 72-84.
    • (2008) Rice , vol.1 , pp. 72-84
    • Susan, R.M.1
  • 42
    • 0036667381 scopus 로고    scopus 로고
    • Arf1 GTPase plays roles in the protein traffic between the endoplasmic reticulum and the Golgi apparatus in tobacco and Arabidopsis cultured cells
    • Takeuchi M, Ueda T, Yahara N, Nakano A (2002) Arf1 GTPase plays roles in the protein traffic between the endoplasmic reticulum and the Golgi apparatus in tobacco and Arabidopsis cultured cells. Plant J 31: 499-515.
    • (2002) Plant J , vol.31 , pp. 499-515
    • Takeuchi, M.1    Ueda, T.2    Yahara, N.3    Nakano, A.4
  • 44
    • 0032168848 scopus 로고    scopus 로고
    • Exocytosis in plants
    • Thiel G, Battey N (1998) Exocytosis in plants. Plant Mol Biol 38: 111-125.
    • (1998) Plant Mol Biol , vol.38 , pp. 111-125
    • Thiel, G.1    Battey, N.2
  • 45
    • 0025731953 scopus 로고
    • Molecular identification of ADP-ribosylation factor mRNAs and their expression in mammalian cells
    • Tsuchiya M, Price SR, Tsai SC, Moss J, Vaughan M (1991) Molecular identification of ADP-ribosylation factor mRNAs and their expression in mammalian cells. J Biol Chem 266: 2772-2777.
    • (1991) J Biol Chem , vol.266 , pp. 2772-2777
    • Tsuchiya, M.1    Price, S.R.2    Tsai, S.C.3    Moss, J.4    Vaughan, M.5
  • 47
    • 0031802483 scopus 로고    scopus 로고
    • The distribution and translocation of the G protein ADP-ribosylation factor 1 in live cells is determined by its GTPase activity
    • Vasudevan C, Han W, Tan Y, Nie Y, Li D, Shome K, Watkins SC, Levitan ES, Romero G (1998) The distribution and translocation of the G protein ADP-ribosylation factor 1 in live cells is determined by its GTPase activity. J Cell Sci 111: 1277-1285.
    • (1998) J Cell Sci , vol.111 , pp. 1277-1285
    • Vasudevan, C.1    Han, W.2    Tan, Y.3    Nie, Y.4    Li, D.5    Shome, K.6    Watkins, S.C.7    Levitan, E.S.8    Romero, G.9
  • 48
    • 46749159193 scopus 로고    scopus 로고
    • Specificity of Arl2/Arl3 signaling is mediated by a ternary Arl3-effector-GAP complex
    • Veltel S, Kravchenko A, Ismail S, Wittinghofer A (2008) Specificity of Arl2/Arl3 signaling is mediated by a ternary Arl3-effector-GAP complex. FEBS Lett 582: 2501-2507.
    • (2008) FEBS Lett , vol.582 , pp. 2501-2507
    • Veltel, S.1    Kravchenko, A.2    Ismail, S.3    Wittinghofer, A.4
  • 49
    • 0142252552 scopus 로고    scopus 로고
    • Analysis of the small GTPase gene superfamily of Arabidopsis
    • Vernoud V, Horton AC, Yang Z, Nielsen E (2003) Analysis of the small GTPase gene superfamily of Arabidopsis. Plant Physiol 131: 1191-1208.
    • (2003) Plant Physiol , vol.131 , pp. 1191-1208
    • Vernoud, V.1    Horton, A.C.2    Yang, Z.3    Nielsen, E.4
  • 50
    • 0029240279 scopus 로고
    • A Zea mays GTP-binding protein of the ARF family complements an Escherichia coli mutant with a temperature-sensitive malonyl-coenzyme A: Acyl carrier protein transacylase
    • Verwoert I, Brown A, Slabas AR, Stuitje AR (1995) A Zea mays GTP-binding protein of the ARF family complements an Escherichia coli mutant with a temperature-sensitive malonyl-coenzyme A: acyl carrier protein transacylase. Plant Mol Biol 27: 629-633.
    • (1995) Plant Mol Biol , vol.27 , pp. 629-633
    • Verwoert, I.1    Brown, A.2    Slabas, A.R.3    Stuitje, A.R.4
  • 51
    • 0031054516 scopus 로고    scopus 로고
    • Interaction of the GTP-binding and GTPase-activating domains of ARD1 involves the effector region of the ADP-ribosylation factor domain
    • Vitale N, Moss J, Vaughan M (1997) Interaction of the GTP-binding and GTPase-activating domains of ARD1 involves the effector region of the ADP-ribosylation factor domain. J Biol Chem 272: 3897-3904.
    • (1997) J Biol Chem , vol.272 , pp. 3897-3904
    • Vitale, N.1    Moss, J.2    Vaughan, M.3
  • 52
    • 34247102281 scopus 로고    scopus 로고
    • Genome-wide analysis of the auxin response factors (ARF) gene family in rice (Oryza sativa)
    • Wang D, Pei K, Fu Y, Sun Z, Li S, Liu H, Tang K, Han B, Tao Y (2007) Genome-wide analysis of the auxin response factors (ARF) gene family in rice (Oryza sativa). Gene 394: 13-24.
    • (2007) Gene , vol.394 , pp. 13-24
    • Wang, D.1    Pei, K.2    Fu, Y.3    Sun, Z.4    Li, S.5    Liu, H.6    Tang, K.7    Han, B.8    Tao, Y.9
  • 53
    • 21744446803 scopus 로고    scopus 로고
    • Dissection of Arabidopsis ADP-RIBOSYLATION FACTOR 1 function in epidermal cell polarity
    • Xu J, Scheres B (2005) Dissection of Arabidopsis ADP-RIBOSYLATION FACTOR 1 function in epidermal cell polarity. Plant Cell 17: 525-536.
    • (2005) Plant Cell , vol.17 , pp. 525-536
    • Xu, J.1    Scheres, B.2
  • 54
    • 0012120289 scopus 로고    scopus 로고
    • Expression patterns of a vernalization-related genes responding to jasmonate
    • Xu YY, Chong K, Xu ZH, Tan KH (2001) Expression patterns of a vernalization-related genes responding to jasmonate. J Integr Plant Biol 43: 871-873.
    • (2001) J Integr Plant Biol , vol.43 , pp. 871-873
    • Xu, Y.Y.1    Chong, K.2    Xu, Z.H.3    Tan, K.H.4
  • 56
    • 0037227958 scopus 로고    scopus 로고
    • ADP ribosylation factor regulates metabolism and antioxidant capacity of transgenic potato tubers
    • Zuk M, Prescha A, Kepczyński J, Szopa J (2003) ADP ribosylation factor regulates metabolism and antioxidant capacity of transgenic potato tubers. J Agric Food Chem 51: 288-294.
    • (2003) J Agric Food Chem , vol.51 , pp. 288-294
    • Zuk, M.1    Prescha, A.2    Kepczyński, J.3    Szopa, J.4


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