-
1
-
-
0028384702
-
Transient transformation of Arabidopsis leaf protoplasts: A versatile experimental system to study gene expression
-
Abel, S., and Theologis, A. (1994). Transient transformation of Arabidopsis leaf protoplasts: A versatile experimental system to study gene expression. Plant J. 5: 421-427.
-
(1994)
Plant J
, vol.5
, pp. 421-427
-
-
Abel, S.1
Theologis, A.2
-
2
-
-
50649109231
-
Genome-wide analyses of alternative splicing in plants: Opportunities and challenges
-
Barbazuk, W.B., Fu, Y., and McGinnis, K.M. (2008). Genome-wide analyses of alternative splicing in plants: Opportunities and challenges. Genome Res. 18: 1381-1392.
-
(2008)
Genome Res
, vol.18
, pp. 1381-1392
-
-
Barbazuk, W.B.1
Fu, Y.2
McGinnis, K.M.3
-
3
-
-
2442713832
-
GeneWise and Genome-wise
-
Birney, E., Clamp, M., and Durbin, R. (2004). GeneWise and Genome-wise. Genome Res. 14: 988-995.
-
(2004)
Genome Res
, vol.14
, pp. 988-995
-
-
Birney, E.1
Clamp, M.2
Durbin, R.3
-
4
-
-
28844482398
-
A general one-step method for the cloning of PCR products
-
Bolchi, A., Ottonello, S., and Petrucco, S. (2005). A general one-step method for the cloning of PCR products. Biotechnol. Appl. Biochem. 42: 205-209.
-
(2005)
Biotechnol. Appl. Biochem
, vol.42
, pp. 205-209
-
-
Bolchi, A.1
Ottonello, S.2
Petrucco, S.3
-
5
-
-
42549163162
-
A critical role for ureides in dark and senescence-induced purineremobilization is unmasked in the Atxdh1 Arabidopsis mutant
-
Brychkova, G., Alikulov, Z., Fluhr, R., and Sagi, M. (2008). A critical role for ureides in dark and senescence-induced purineremobilization is unmasked in the Atxdh1 Arabidopsis mutant. Plant J. 54: 496-509.
-
(2008)
Plant J
, vol.54
, pp. 496-509
-
-
Brychkova, G.1
Alikulov, Z.2
Fluhr, R.3
Sagi, M.4
-
6
-
-
34547121226
-
The structure of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase provides insights into the mechanism of uric acid degradation
-
Cendron, L., Berni, R., Folli, C., Ramazzina, I., Percudani, R., and Zanotti, G. (2007). The structure of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase provides insights into the mechanism of uric acid degradation. J. Biol. Chem. 282: 18182-18189.
-
(2007)
J. Biol. Chem
, vol.282
, pp. 18182-18189
-
-
Cendron, L.1
Berni, R.2
Folli, C.3
Ramazzina, I.4
Percudani, R.5
Zanotti, G.6
-
7
-
-
0242372121
-
The subcellular localization of plant protein phosphatase 5 isoforms is determined by alternative splicing
-
De la Fuente van Bentem, S., Vossen, J.H., Vermeer, J.E., de Vroomen, M.J., Gadella, T.W., Jr., Haring, M.A., and Cornelissen, B.J. (2003). The subcellular localization of plant protein phosphatase 5 isoforms is determined by alternative splicing. Plant Physiol. 133: 702-712.
-
(2003)
Plant Physiol
, vol.133
, pp. 702-712
-
-
Bentem, S.D.L.F.V.1
Vossen, J.H.2
Vermeer, J.E.3
de Vroomen, M.J.4
Gadella Jr., T.W.5
Haring, M.A.6
Cornelissen, B.J.7
-
8
-
-
0035999372
-
A novel superfamily of transporters for allantoin and other oxo derivatives of nitrogen heterocyclic compounds in Arabidopsis
-
Desimone, M., Catoni, E., Ludewig, U., Hilpert, M., Schneider, A., Kunze, R., Tegeder, M., Frommer, W.B., and Schumacher, K. (2002). A novel superfamily of transporters for allantoin and other oxo derivatives of nitrogen heterocyclic compounds in Arabidopsis. Plant Cell 14: 847-856.
-
(2002)
Plant Cell
, vol.14
, pp. 847-856
-
-
Desimone, M.1
Catoni, E.2
Ludewig, U.3
Hilpert, M.4
Schneider, A.5
Kunze, R.6
Tegeder, M.7
Frommer, W.B.8
Schumacher, K.9
-
9
-
-
64949203222
-
Enzyme activities and subcellular localization of members of the Arabidopsis glutathione transferase superfamily
-
Dixon, D.P., Hawkins, T., Hussey, P.J., and Edwards, R. (2009). Enzyme activities and subcellular localization of members of the Arabidopsis glutathione transferase superfamily. J. Exp. Bot. 60: 1207-1218.
-
(2009)
J. Exp. Bot
, vol.60
, pp. 1207-1218
-
-
Dixon, D.P.1
Hawkins, T.2
Hussey, P.J.3
Edwards, R.4
-
10
-
-
57749104780
-
Novel proteins, putative membrane transporters, and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes
-
Eubel, H., Meyer, E.H., Taylor, N.L., Bussell, J.D., O'Toole, N., Heazlewood, J.L., Castleden, I., Small, I.D., Smith, S.M., and Millar, A.H. (2008). Novel proteins, putative membrane transporters, and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes. Plant Physiol. 148: 1809-1829.
-
(2008)
Plant Physiol
, vol.148
, pp. 1809-1829
-
-
Eubel, H.1
Meyer, E.H.2
Taylor, N.L.3
Bussell, J.D.4
O'Toole, N.5
Heazlewood, J.L.6
Castleden, I.7
Small, I.D.8
Smith, S.M.9
Millar, A.H.10
-
11
-
-
39449131542
-
Analysis of living cells grown on different titanium surfaces by time-lapse confocal micros-copy
-
Gatti, R., Orlandini, G., Uggeri, J., Belletti, S., Galli, C., Raspanti, M., Scandroglio, R., and Guizzardi, S. (2008). Analysis of living cells grown on different titanium surfaces by time-lapse confocal micros-copy. Micron 39: 137-143.
-
(2008)
Micron
, vol.39
, pp. 137-143
-
-
Gatti, R.1
Orlandini, G.2
Uggeri, J.3
Belletti, S.4
Galli, C.5
Raspanti, M.6
Scandroglio, R.7
Guizzardi, S.8
-
12
-
-
0032961270
-
ESPript: Analysis of multiple sequence alignments in PostScript
-
Gouet, P., Courcelle, E., Stuart, D.I., and Metoz, F. (1999). ESPript: Analysis of multiple sequence alignments in PostScript. Bioinformat-ics 15: 305-308.
-
(1999)
Bioinformat-ics
, vol.15
, pp. 305-308
-
-
Gouet, P.1
Courcelle, E.2
Stuart, D.I.3
Metoz, F.4
-
13
-
-
0002515341
-
Localization of enzymes of ureide biosynthesis in peroxisomes and microsomes of nodules
-
Hanks, J.F., Tolbert, N.E., and Schubert, K.R. (1981). Localization of enzymes of ureide biosynthesis in peroxisomes and microsomes of nodules. Plant Physiol. 68: 65-69.
-
(1981)
Plant Physiol
, vol.68
, pp. 65-69
-
-
Hanks, J.F.1
Tolbert, N.E.2
Schubert, K.R.3
-
14
-
-
0030019124
-
Pumpkin hydroxypyruvate reductases with and without a putative C-terminal signal for targeting to microbodies may be pro-duced by alternative splicing
-
Hayashi, M., Tsugeki, R., Kondo, M., Mori, H., and Nishimura, M. (1996). Pumpkin hydroxypyruvate reductases with and without a putative C-terminal signal for targeting to microbodies may be pro-duced by alternative splicing. Plant Mol. Biol. 30: 183-189.
-
(1996)
Plant Mol. Biol
, vol.30
, pp. 183-189
-
-
Hayashi, M.1
Tsugeki, R.2
Kondo, M.3
Mori, H.4
Nishimura, M.5
-
15
-
-
34547475430
-
Dual specificities of the glyoxysomal/peroxisomal processing protease Deg15 in higher plants
-
Helm, M., Luck, C., Prestele, J., Hierl, G., Huesgen, P.F., Frohlich, T., Arnold, G.J., Adamska, I., Gorg, A., Lottspeich, F., and Gietl, C. (2007). Dual specificities of the glyoxysomal/peroxisomal processing protease Deg15 in higher plants. Proc. Natl. Acad. Sci. USA 104: 11501-11506.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 11501-11506
-
-
Helm, M.1
Luck, C.2
Prestele, J.3
Hierl, G.4
Huesgen, P.F.5
Frohlich, T.6
Arnold, G.J.7
Adamska, I.8
Gorg, A.9
Lottspeich, F.10
Gietl, C.11
-
16
-
-
33748475698
-
Structural and functional evolution of transthyretin and trans-thyretin-like proteins
-
Hennebry, S.C., Wright, H.M., Likic, V.A., and Richardson, S.J. (2006). Structural and functional evolution of transthyretin and trans-thyretin-like proteins. Proteins 64: 1024-1045.
-
(2006)
Proteins
, vol.64
, pp. 1024-1045
-
-
Hennebry, S.C.1
Wright, H.M.2
Likic, V.A.3
Richardson, S.J.4
-
17
-
-
33745618437
-
Structural and functional analysis of PucM, a hydrolase in the ureide pathway and a member of the transthyretin-related protein family
-
Jung, D.K., Lee, Y., Park, S.G., Park, B.C., Kim, G.H., and Rhee, S. (2006). Structural and functional analysis of PucM, a hydrolase in the ureide pathway and a member of the transthyretin-related protein family. Proc. Natl. Acad. Sci. USA 103: 9790-9795.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 9790-9795
-
-
Jung, D.K.1
Lee, Y.2
Park, S.G.3
Park, B.C.4
Kim, G.H.5
Rhee, S.6
-
18
-
-
0032544185
-
Spectroscopic characterization of intermediates in the urate oxidase reaction
-
Kahn, K., and Tipton, P.A. (1998). Spectroscopic characterization of intermediates in the urate oxidase reaction. Biochemistry 37: 11651-11659.
-
(1998)
Biochemistry
, vol.37
, pp. 11651-11659
-
-
Kahn, K.1
Tipton, P.A.2
-
19
-
-
0142245713
-
Alternative splicing and proteome diversity in plants: The tip of the iceberg has just emerged
-
Kazan, K. (2003). Alternative splicing and proteome diversity in plants: The tip of the iceberg has just emerged. Trends Plant Sci. 8: 468-471.
-
(2003)
Trends Plant Sci
, vol.8
, pp. 468-471
-
-
Kazan, K.1
-
20
-
-
63649101650
-
Matching the proteome to the genome: The microbody of penicillin-producing Penicillium chrysogenum cells
-
Kiel, J.A., van den Berg, M.A., Fusetti, F., Poolman, B., Bovenberg, R.A., Veenhuis, M., and van der Klei, I.J. (2009). Matching the proteome to the genome: The microbody of penicillin-producing Penicillium chrysogenum cells. Funct. Integr. Genomics 9: 167-184.
-
(2009)
Funct. Integr. Genomics
, vol.9
, pp. 167-184
-
-
Kiel, J.A.1
Berg, M.A.V.D.2
Fusetti, F.3
Poolman, B.4
Bovenberg, R.A.5
Veenhuis, M.6
Klei, I.J.V.D.7
-
21
-
-
34548179338
-
Structural and functional basis for (S)-allantoin formation in the ureide pathway
-
Kim, K., Park, J., and Rhee, S. (2007). Structural and functional basis for (S)-allantoin formation in the ureide pathway. J. Biol. Chem. 282: 23457-23464.
-
(2007)
J. Biol. Chem
, vol.282
, pp. 23457-23464
-
-
Kim, K.1
Park, J.2
Rhee, S.3
-
22
-
-
0033617187
-
The molecular basis of substrate channeling
-
Miles, E.W., Rhee, S., and Davies, D.R. (1999). The molecular basis of substrate channeling. J. Biol. Chem. 274: 12193-12196.
-
(1999)
J. Biol. Chem
, vol.274
, pp. 12193-12196
-
-
Miles, E.W.1
Rhee, S.2
Davies, D.R.3
-
23
-
-
4544236639
-
The Arabidopsis transthyretin-like protein is a potential substrate of BRASSINOSTEROID-INSENSITIVE 1
-
Nam, K.H., and Li, J. (2004). The Arabidopsis transthyretin-like protein is a potential substrate of BRASSINOSTEROID-INSENSITIVE 1. Plant Cell 16: 2406-2417.
-
(2004)
Plant Cell
, vol.16
, pp. 2406-2417
-
-
Nam, K.H.1
Li, J.2
-
24
-
-
44749083127
-
Complexity of Hsp90 in organelle targeting
-
Prassinos, C., Haralampidis, K., Milioni, D., Samakovli, D., Krambis, K., and Hatzopoulos, P. (2008). Complexity of Hsp90 in organelle targeting. Plant Mol. Biol. 67: 323-334.
-
(2008)
Plant Mol. Biol
, vol.67
, pp. 323-334
-
-
Prassinos, C.1
Haralampidis, K.2
Milioni, D.3
Samakovli, D.4
Krambis, K.5
Hatzopoulos, P.6
-
25
-
-
38949131275
-
Dual targeting of Arabidopsis holocarboxylase synthetase1: A small upstream open reading frame regulates translation initiation and protein targeting
-
Puyaubert, J., Denis, L., and Alban, C. (2008). Dual targeting of Arabidopsis holocarboxylase synthetase1: A small upstream open reading frame regulates translation initiation and protein targeting. Plant Physiol. 146: 478-491.
-
(2008)
Plant Physiol
, vol.146
, pp. 478-491
-
-
Puyaubert, J.1
Denis, L.2
Alban, C.3
-
26
-
-
0029117015
-
A commentary on the practical applications of competitive PCR
-
Raeymaekers, L. (1995). A commentary on the practical applications of competitive PCR. Genome Res. 5: 91-94.
-
(1995)
Genome Res
, vol.5
, pp. 91-94
-
-
Raeymaekers, L.1
-
27
-
-
33646580070
-
Completing the uric acid degradation pathway through phylogenetic comparison of whole genomes
-
Ramazzina, I., Folli, C., Secchi, A., Berni, R., and Percudani, R. (2006). Completing the uric acid degradation pathway through phylogenetic comparison of whole genomes. Nat. Chem. Biol. 2: 144-148.
-
(2006)
Nat. Chem. Biol
, vol.2
, pp. 144-148
-
-
Ramazzina, I.1
Folli, C.2
Secchi, A.3
Berni, R.4
Percudani, R.5
-
28
-
-
0036914860
-
Cloning and expression of the gene for soybean hydroxyisourate hydrolase. Localization and implications for function and mechanism
-
Raychaudhuri, A., and Tipton, P.A. (2002). Cloning and expression of the gene for soybean hydroxyisourate hydrolase. Localization and implications for function and mechanism. Plant Physiol. 130: 2061-2068.
-
(2002)
Plant Physiol
, vol.130
, pp. 2061-2068
-
-
Raychaudhuri, A.1
Tipton, P.A.2
-
29
-
-
34250813107
-
Alternative splicing of pre-messenger RNAs in plants in the genomic era
-
Reddy, A.S. (2007). Alternative splicing of pre-messenger RNAs in plants in the genomic era. Annu. Rev. Plant Biol. 58: 267-294.
-
(2007)
Annu. Rev. Plant Biol
, vol.58
, pp. 267-294
-
-
Reddy, A.S.1
-
30
-
-
37249016441
-
Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms
-
Reumann, S., Babujee, L., Ma, C., Wienkoop, S., Siemsen, T., Antonicelli, G.E., Rasche, N., Luder, F., Weckwerth, W., and Jahn, O. (2007). Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. Plant Cell 19: 3170-3193.
-
(2007)
Plant Cell
, vol.19
, pp. 3170-3193
-
-
Reumann, S.1
Babujee, L.2
Ma, C.3
Wienkoop, S.4
Siemsen, T.5
Antonicelli, G.E.6
Rasche, N.7
Luder, F.8
Weckwerth, W.9
Jahn, O.10
-
31
-
-
50949105626
-
A general definition and nomenclature for alternative splicing events
-
Sammeth, M., Foissac, S., and Guigo, R. (2008). A general definition and nomenclature for alternative splicing events. PLOS Comput. Biol. 4: e1000147.
-
(2008)
PLOS Comput. Biol
, vol.4
, pp. 1000147
-
-
Sammeth, M.1
Foissac, S.2
Guigo, R.3
-
32
-
-
0002316172
-
Products of biological nitrogen fixation in higher plants: Synthesis, transport, and metabolism
-
Schubert, K.R. (1986). Products of biological nitrogen fixation in higher plants: Synthesis, transport, and metabolism. Annu. Rev. Plant Physiol 37: 539-573.
-
(1986)
Annu. Rev. Plant Physiol
, vol.37
, pp. 539-573
-
-
Schubert, K.R.1
-
33
-
-
0001960139
-
Fast and reliable mini-prep RNA extraction from Neurospora crassa
-
Sokolowsky, V., Kaldenhoff, R., Ricci, M., and Russo, V. (1990). Fast and reliable mini-prep RNA extraction from Neurospora crassa. Fun-gal Genet. Newsl. 37: 41-43.
-
(1990)
Fun-gal Genet. Newsl
, vol.37
, pp. 41-43
-
-
Sokolowsky, V.1
Kaldenhoff, R.2
Ricci, M.3
Russo, V.4
-
34
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J.D., Higgins, D.G., and Gibson, T.J. (1994). CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
35
-
-
29344475251
-
Update on ureide degradation in legumes
-
Todd, C.D., Tipton, P.A., Blevins, D.G., Piedras, P., Pineda, M., and Polacco, J.C. (2006). Update on ureide degradation in legumes. J. Exp. Bot. 57: 5-12.
-
(2006)
J. Exp. Bot
, vol.57
, pp. 5-12
-
-
Todd, C.D.1
Tipton, P.A.2
Blevins, D.G.3
Piedras, P.4
Pineda, M.5
Polacco, J.C.6
-
36
-
-
33646484347
-
Genomewide comparative anal-ysis of alternative splicing in plants
-
Wang, B.B., and Brendel, V. (2006). Genomewide comparative anal-ysis of alternative splicing in plants. Proc. Natl. Acad. Sci. USA 103: 7175-7180.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 7175-7180
-
-
Wang, B.B.1
Brendel, V.2
-
37
-
-
38949170755
-
Identification, biochemical characterization, and subcellular localiza-tion of allantoate amidohydrolases from Arabidopsis and soybean
-
Werner, A.K., Sparkes, I.A., Romeis, T., and Witte, C.P. (2008). Identification, biochemical characterization, and subcellular localiza-tion of allantoate amidohydrolases from Arabidopsis and soybean. Plant Physiol. 146: 418-430.
-
(2008)
Plant Physiol
, vol.146
, pp. 418-430
-
-
Werner, A.K.1
Sparkes, I.A.2
Romeis, T.3
Witte, C.P.4
-
38
-
-
64849088316
-
Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas
-
Worden, A.Z., et al. (2009). Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Science 324: 268-272.
-
(2009)
Science
, vol.324
, pp. 268-272
-
-
Worden, A.Z.1
-
39
-
-
0032125091
-
Role of a COP1 interactive protein in mediating light-regulated gene expression in Arabidopsis
-
Yamamoto, Y.Y., Matsui, M., Ang, L.H., and Deng, X.W. (1998). Role of a COP1 interactive protein in mediating light-regulated gene expression in Arabidopsis. Plant Cell 10: 1083-1094.
-
(1998)
Plant Cell
, vol.10
, pp. 1083-1094
-
-
Yamamoto, Y.Y.1
Matsui, M.2
Ang, L.H.3
Deng, X.W.4
-
40
-
-
33748969507
-
Structure of zebra fish HIUase: Insights into evolution of an enzyme to a hormone transporter
-
Zanotti, G., Cendron, L., Ramazzina, I., Folli, C., Percudani, R., and Berni, R. (2006). Structure of zebra fish HIUase: Insights into evolution of an enzyme to a hormone transporter. J. Mol. Biol. 363: 1-9.
-
(2006)
J. Mol. Biol
, vol.363
, pp. 1-9
-
-
Zanotti, G.1
Cendron, L.2
Ramazzina, I.3
Folli, C.4
Percudani, R.5
Berni, R.6
|