SOPRA: Scaffolding algorithm for paired reads via statistical optimization

BMC Bioinformatics

Volumn 11, Issue , 2010, Pages

  Dayarian, Adel ^a   Michael, Todd P ^b,d   Sengupta, Anirvan M ^a,c  

^a RUTGERS UNIVERSITY   (United States)

^b RUTGERS UNIVERSITY   (United States)

^c RUTGERS UNIVERSITY   (United States)

^d MONSANTO COMPANY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CONNECTIVITY GRAPH; CONSISTENT CONSTRAINT; DE NOVO ASSEMBLIES; FUNDAMENTAL LIMITATIONS; GREEDY ALGORITHMS; HIGH-THROUGHPUT SEQUENCING; OPTIMIZATION PROBLEMS; STATISTICAL OPTIMIZATION;

ALGORITHMS; GENES; OPTIMIZATION; SCAFFOLDS;

PROBLEM SOLVING;

BACTERIA (MICROORGANISMS);

ALGORITHM; ARTICLE; BACTERIAL GENOME; BACTERIUM; CONTIG MAPPING; DNA SEQUENCE; GENETICS; METHODOLOGY;

ALGORITHMS; BACTERIA; CONTIG MAPPING; GENOME, BACTERIAL; SEQUENCE ANALYSIS, DNA;

EID: 77954324418     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-11-345     Document Type: Article

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