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Volumn 55, Issue 4, 2010, Pages 901-907

Genome-wide screen for individual identification snps (IISNPs) and the confirmation of six of them in han chinese with pyrosequencing technology

Author keywords

forensic sciences; Han Chinese; HapMap database; individual identification; minor allele frequency (MAF); SNP

Indexed keywords

ARTICLE; CHINA; DNA FINGERPRINTING; DNA SEQUENCE; ETHNIC GROUP; FEMALE; GENE FREQUENCY; GENETICS; HUMAN; MALE; METHODOLOGY; POLYMERASE CHAIN REACTION; POPULATION GENETICS; SINGLE NUCLEOTIDE POLYMORPHISM; TANDEM REPEAT;

EID: 77954319879     PISSN: 00221198     EISSN: 15564029     Source Type: Journal    
DOI: 10.1111/j.1556-4029.2010.01389.x     Document Type: Article
Times cited : (9)

References (27)
  • 2
    • 0027999190 scopus 로고
    • Variation in short tandem repeat sequences: A survey of twelve microsatellite loci for use as forensic identification markers
    • Urquhart A, Kimpton CP, Downes TJ, Gill P. Variation in short tandem repeat sequences: a survey of twelve microsatellite loci for use as forensic identification markers. Int J Legal Med 1994 107 : 13 20.
    • (1994) Int J Legal Med , vol.107 , pp. 13-20
    • Urquhart, A.1    Kimpton, C.P.2    Downes, T.J.3    Gill, P.4
  • 3
    • 0032741103 scopus 로고    scopus 로고
    • Population data on the thirteen CODIS core short tandem repeat loci in African Americans, U.S. Caucasians, Hispanics, Bahamians, Jamaicans, and Trinidadians
    • Budowle B, Moretti TR, Baumstark AL, Defenbaugh DA, Keys KM. Population data on the thirteen CODIS core short tandem repeat loci in African Americans, U.S. Caucasians, Hispanics, Bahamians, Jamaicans, and Trinidadians. J Forensic Sci 1999 44 : 1277 1286.
    • (1999) J Forensic Sci , vol.44 , pp. 1277-1286
    • Budowle, B.1    Moretti, T.R.2    Baumstark, A.L.3    Defenbaugh, D.A.4    Keys, K.M.5
  • 4
    • 35349012592 scopus 로고    scopus 로고
    • Genome-wide detection and characterization of positive selection in human populations
    • Sabeti PC, Varilly P, Fry B, Lohmueller J, Hostetter E, Cotsapas C, et al. Genome-wide detection and characterization of positive selection in human populations. Nature 2007 449 : 913 918.
    • (2007) Nature , vol.449 , pp. 913-918
    • Sabeti, P.C.1    Varilly, P.2    Fry, B.3    Lohmueller, J.4    Hostetter, E.5    Cotsapas, C.6
  • 5
    • 42349106044 scopus 로고    scopus 로고
    • Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes
    • Zeggini E, Scott LJ, Saxena R, Voight BF, Marchini JL, Hu T, et al. Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes. Nat Genet 2008 40 : 638 645.
    • (2008) Nat Genet , vol.40 , pp. 638-645
    • Zeggini, E.1    Scott, L.J.2    Saxena, R.3    Voight, B.F.4    Marchini, J.L.5    Hu, T.6
  • 6
    • 36949033151 scopus 로고    scopus 로고
    • STRs vs. SNPs: Thoughts on the future of forensic DNA testing
    • Butler JM, Coble MD, Vallone PM. STRs vs. SNPs: thoughts on the future of forensic DNA testing. Forensic Sci Med Pathol 2007 3 : 200 205.
    • (2007) Forensic Sci Med Pathol , vol.3 , pp. 200-205
    • Butler, J.M.1    Coble, M.D.2    Vallone, P.M.3
  • 7
    • 43249088516 scopus 로고    scopus 로고
    • Forensically relevant SNP classes
    • Budowle B, van Daal A. Forensically relevant SNP classes. BioTechniques 2008 44 : 603 610.
    • (2008) BioTechniques , vol.44 , pp. 603-610
    • Budowle, B.1    Van Daal, A.2
  • 8
    • 17144376705 scopus 로고    scopus 로고
    • Pros and cons in the use of SNPs in forensic kinship investigation: A comparative analysis with STRs
    • Amorim A, Pereira L. Pros and cons in the use of SNPs in forensic kinship investigation: a comparative analysis with STRs. Forensic Sci Int 2005 150 (1 17 21.
    • (2005) Forensic Sci Int , vol.150 , Issue.1 , pp. 17-21
    • Amorim, A.1    Pereira, L.2
  • 10
    • 34147106043 scopus 로고    scopus 로고
    • Candidate SNPs for a universal individual identification panel
    • Pakstis AJ, Speed WC, Kidd JR, Kidd KK. Candidate SNPs for a universal individual identification panel. Hum Genet 2007 121 : 305 317.
    • (2007) Hum Genet , vol.121 , pp. 305-317
    • Pakstis, A.J.1    Speed, W.C.2    Kidd, J.R.3    Kidd, K.K.4
  • 13
    • 11444251712 scopus 로고    scopus 로고
    • Selection of twenty-four highly informative SNP markers for human identification and paternity analysis in Koreans
    • Lee HY, Park MJ, Yoo JE, Chung U, Han GR, Shin KJ. Selection of twenty-four highly informative SNP markers for human identification and paternity analysis in Koreans. Forensic Sci Int 2005 148 : 107 112.
    • (2005) Forensic Sci Int , vol.148 , pp. 107-112
    • Lee, H.Y.1    Park, M.J.2    Yoo, J.E.3    Chung, U.4    Han, G.R.5    Shin, K.J.6
  • 14
    • 14644434419 scopus 로고    scopus 로고
    • Allele frequencies for 70 autosomal SNP loci with U.S. Caucasian, African-American, and Hispanic samples
    • Vallone PM, Decker AE, Butler JM. Allele frequencies for 70 autosomal SNP loci with U.S. Caucasian, African-American, and Hispanic samples. Forensic Sci Int 2005 149 : 279 286.
    • (2005) Forensic Sci Int , vol.149 , pp. 279-286
    • Vallone, P.M.1    Decker, A.E.2    Butler, J.M.3
  • 15
    • 33845872297 scopus 로고    scopus 로고
    • 6 Y-SNP typing of China and Korean samples using primer extension and DHPLC
    • Shi M, Hou Y, Yan J, Bai R, Yu X. 6 Y-SNP typing of China and Korean samples using primer extension and DHPLC. J Forensic Sci 2007 52 : 235 236.
    • (2007) J Forensic Sci , vol.52 , pp. 235-236
    • Shi, M.1    Hou, Y.2    Yan, J.3    Bai, R.4    Yu, X.5
  • 16
    • 28644434277 scopus 로고    scopus 로고
    • Pyrosequencing history, biochemistry and future
    • Ahmadian A, Ehn M, Hober S. Pyrosequencing history, biochemistry and future. Clin Chim Acta 2006 363 : 83 94.
    • (2006) Clin Chim Acta , vol.363 , pp. 83-94
    • Ahmadian, A.1    Ehn, M.2    Hober, S.3
  • 17
    • 0035153070 scopus 로고    scopus 로고
    • Pyrosequencing sheds light on DNA sequencing
    • Ronaghi M. Pyrosequencing sheds light on DNA sequencing. Genome Res 2001 11 : 3 11.
    • (2001) Genome Res , vol.11 , pp. 3-11
    • Ronaghi, M.1
  • 18
    • 25844472377 scopus 로고    scopus 로고
    • Estimating RNA editing efficiency of five editing sites in the serotonin 2C receptor by pyrosequencing
    • Iwamoto K, Bundo M, Kato T. Estimating RNA editing efficiency of five editing sites in the serotonin 2C receptor by pyrosequencing. RNA 2005 11 : 1596 1603.
    • (2005) RNA , vol.11 , pp. 1596-1603
    • Iwamoto, K.1    Bundo, M.2    Kato, T.3
  • 20
    • 77954329044 scopus 로고    scopus 로고
    • High GC amplification: A comparative study of betaine, DMSO, formamide and glycerol as additives
    • Zeng ZS, Yan HT, Zheng XD, Hu GZ, Chen Y, Ding M. High GC amplification: a comparative study of betaine, DMSO, formamide and glycerol as additives. Life Sci J 2006 3 : 67 71.
    • (2006) Life Sci J , vol.3 , pp. 67-71
    • Zeng, Z.S.1    Yan, H.T.2    Zheng, X.D.3    Hu, G.Z.4    Chen, Y.5    Ding, M.6
  • 21
    • 0002378154 scopus 로고    scopus 로고
    • Prof DNA 4. (accessed on March 8, 2010).
    • Tereba A. Tools for analysis of population statistics. Prof DNA 4 1999 2 : 14 6. http://www.promega.com/geneticidtools (accessed on March 8, 2010).
    • (1999) Tools for Analysis of Population Statistics , vol.2 , pp. 14-16
    • Tereba, A.1
  • 22
    • 33845453784 scopus 로고    scopus 로고
    • Population genetic data of 15 STR loci in Han population of Henan province (central China)
    • Zeng ZS, Zheng XD, Zhu YL, Wang ZQ, Xiang ZD, Meng XS, et al. Population genetic data of 15 STR loci in Han population of Henan province (central China). Leg Med (Tokyo) 2007 9 : 30 2.
    • (2007) Leg Med (Tokyo) , vol.9 , pp. 30-32
    • Zeng, Z.S.1    Zheng, X.D.2    Zhu, Y.L.3    Wang, Z.Q.4    Xiang, Z.D.5    Meng, X.S.6
  • 23
    • 0033033592 scopus 로고    scopus 로고
    • The utility of STR loci beyond human identification: Implications for the development of new DNA typing systems
    • Chakraborty R, Stivers DN, Su B, Zhong Y, Budowle B. The utility of STR loci beyond human identification: implications for the development of new DNA typing systems. Electrophoresis 1999 20 : 1682 1696.
    • (1999) Electrophoresis , vol.20 , pp. 1682-1696
    • Chakraborty, R.1    Stivers, D.N.2    Su, B.3    Zhong, Y.4    Budowle, B.5
  • 24
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • Weir BS, Cockerham CC. Estimating F-statistics for the analysis of population structure. Evolution 1984 38 : 1358 1370.
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2
  • 25
    • 0004275709 scopus 로고
    • New York, NY: Columbia University Press
    • Nei M. Molecular evolutionary genetics. New York, NY: Columbia University Press, 1987; 187-92.
    • (1987) Molecular Evolutionary Genetics. , pp. 187-192
    • Nei, M.1
  • 26
    • 0006919926 scopus 로고
    • Analysis of gene diversity in subdivided populations
    • Nei M. Analysis of gene diversity in subdivided populations. Proc Natl Acad Sci USA 1973 70 : 3321 3323.
    • (1973) Proc Natl Acad Sci USA , vol.70 , pp. 3321-3323
    • Nei, M.1


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