A label-free differential proteomic analysis of mouse bronchoalveolar lavage fluid exposed to ultrafine carbon black

Analytica Chimica Acta

Volumn 673, Issue 2, 2010, Pages 160-166

  Chiu, Kuo Hsun ^a   Lee, Wen Lian William ^b   Chang, Chih Ching ^a   Chen, San Cher ^a   Chang, Yu Chen ^a   Ho, Mei Ning ^a   Hsu, Jing Fang ^a   Liao, Pao Chi ^a,c  

^a NATIONAL CHENG KUNG UNIVERSITY   (Taiwan)

^b CHUNG SHAN MEDICAL UNIVERSITY   (Taiwan)

^c NATIONAL CHENG KUNG UNIVERSITY   (Taiwan)

Author keywords

Bronchoalveolar lavage fluid (BALF); Label free proteomics; Nanoparticle; Ultrafine carbon black (ufCB)

Indexed keywords

BRONCHOALVEOLAR LAVAGE FLUID; LABEL FREE; PROTEOMICS; ULTRAFINE;

BIOLOGICAL ORGANS; CARBON BLACK; FLUIDS; MOLECULAR BIOLOGY; NANOPARTICLES; PEPTIDES; SEARCH ENGINES; SURFACE ACTIVE AGENTS;

LABELS;

BIOLOGICAL MARKER; CALGRANULIN A; CARBON; CARBON BALCK; CYSTEINE PROTEINASE INHIBITOR A 3K; ES1 PROTEIN; HEMOPEXIN; IMMUNOGLOBULIN HEAVY CHAIN; KININOGEN I; ORGANIC CATION TRANSPORTER; PEPTIDE; PROFILAGGRIN; SCRIBBLED HOMOLOG 1; SERINE PROTEINASE INHIBITOR; SERINE PROTEINASE INHIBITOR A 3K; SURFACTANT; SURFACTANT ASSOCIATED PROTEIN; TRISTETRAPROLIN; UNCLASSIFIED DRUG; VITAMIN D BINDING PROTEIN; PROTEOME; SOOT;

ANIMAL CELL; ANIMAL EXPERIMENT; ANIMAL MODEL; ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; DATA BASE; EXPOSURE; LIQUID CHROMATOGRAPHY; LUNG DISEASE; LUNG LAVAGE; MALE; MASS SPECTROMETRY; MOUSE; NONHUMAN; PATHOPHYSIOLOGY; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEOMICS; QUANTITATIVE ANALYSIS; TANDEM MASS SPECTROMETRY; ACUTE LUNG INJURY; ANIMAL; CHEMICALLY INDUCED; CHEMISTRY; ELECTROSPRAY MASS SPECTROMETRY; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; INSTITUTE FOR CANCER RESEARCH MOUSE; METABOLISM; PROCEDURES; PROTEIN DATABASE; SOOT;

ACUTE LUNG INJURY; ANIMALS; BRONCHOALVEOLAR LAVAGE FLUID; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; DATABASES, PROTEIN; MALE; MICE; MICE, INBRED ICR; PROTEOME; PROTEOMICS; SOOT; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION;

EID: 77954212776     PISSN: 00032670     EISSN: 18734324     Source Type: Journal    
DOI: 10.1016/j.aca.2010.05.041     Document Type: Article

References (47)

1. Ferin J., Oberdorster G., Penney D.P. Am. J. Respir. Cell Mol. Biol. 1992, 6:535-542.
2. Peters A., Wichmann H.E., Tuch T., Heinrich J., Heyder J. Am. J. Respir. Crit. Care Med. 1997, 155:1376-1383.
3. BeruBe K., Balharry D., Sexton K., Koshy L., Jones T. Clin. Exp. Pharmacol. Physiol. 2007, 34:1044-1050.
4. Li X.Y., Gilmour P.S., Donaldson K., MacNee W. Thorax 1996, 51:1216-1222.
5. Li X.Y., Gilmour P.S., Donaldson K., MacNee W. Environ. Health Perspect. Suppl. 1997, 5:1279-1283.
6. Renwick L.C., Brown D., Clouter A., Donaldson K. Occup. Environ. Med. 2004, 61:442-447.
7. Noel-Georis I., Bernard A., Falmagne P., Wattiez R. J. Chromatogr. B: Analyt. Technol. Biomed. Life Sci. 2002, 771:221-236.
8. Wattiez R., Hermans C., Cruyt C., Bernard A., Falmagne P. Electrophoresis 2000, 21:2703-2712.
9. Lindahl M., Stahlbom B., Tagesson C. Electrophoresis 1999, 20:3670-3676.
10. Lee Y.S., Chen P.W., Tsai P.J., Su S.H., Liao P.C. Proteomics 2006, 6:2236-2250.
11. Bell D.Y., Haseman J.A., Spock A., McLennan G., Hook G.E. Am. Rev. Respir. Dis. 1981, 124:72-79.
12. Vasudev N.S., Ferguson R.E., Cairns D.A., Stanley A.J., Selby P.J., Banks R.E. Proteomics 2008, 8:5074-5085.
13. Campostrini N., Areces L.B., Rappsilber J., Pietrogrande M.C., Pastorino F., Ponzoni M., Righetti P.G. Proteomics 2005, 5:2385-2395.
14. Petrak J., Ivanek R., Toman O., Cmejla R., Cmejlova J., Vyoral D., Zivny J., Vulpe C.D. Proteomics 2008, 8:1744-1749.
15. Nesvizhskii A.I., Aebersold R. Mol. Cell. Proteomics 2005, 4:1419-1440.
16. Wolters D.A., Washburn M.P., Yates J.R. Anal. Chem. 2001, 73:5683-5690.
17. Bondarenko P.V., Chelius D., Shaler T.A. Anal. Chem. 2002, 74:4741-4749.
18. Chelius D., Bondarenko P.V. J. Proteome Res. 2002, 1:317-323.
19. Wang W., Zhou H., Lin H., Roy S., Shaler T.A., Hill L.R., Norton S., Kumar P., Anderle M., Becker C.H. Anal. Chem. 2003, 75:4818-4826.
20. Anderson D.C., Li W., Payan D.G., Noble W.S. J. Proteome Res. 2003, 2:137-146.
21. Guo Y., Ma S.F., Grigoryev D., Van Eyk J.E., Garcia J.G. Proteomics 2005, 5:4608-4624.
22. Tyan Y.C., Guo H.R., Liu C.Y., Liao P.C. Anal. Chim. Acta 2006, 579:158-176.
23. Tyan Y.C., Wu H.Y., Su W.C., Chen P.W., Liao P.C. Proteomics 2005, 5:1062-1074.
24. Chao C.C., Chelius D., Zhang T., Daggle L., Ching W.M. Proteomics 2004, 4:1280-1292.
25. Li X.J., Zhang H., Ranish J.A., Aebersold R. Anal. Chem. 2003, 75:6648-6657.
26. Chang C.C., Chiu H.F., Wu Y.S., Li Y.C., Tsai M.L., Shen C.K., Yang C.Y. Environ. Health Perspect. 2005, 113:454-460.
27. Chang C.C., Chen S.H., Ho S.H., Yang C.Y., Wang H.D., Tsai M.L. Proteomics 2007, 7:4388-4397.
28. Zhao J., Yeong L.H., Wong W.S. Int. Arch. Allergy Immunol. 2007, 142:219-229.
29. Magi B., Bargagli E., Bini L., Rottoli P. Proteomics 2006, 6:6354-6369.
30. Merkel D., Rist W., Seither P., Weith A., Lenter M.C. Proteomics 2005, 5:2972-2980.
31. Metcalf J.P., Thompson A.B., Gossman G.L., Nelson K.J., Koyama S., Rennard S.I., Robbins R.A. Am. Rev. Respir. Dis. 1991, 143:844-849.
32. Noel-Georis I., Bernard A., Falmagne P., Wattiez R. Dis. Markers 2001, 17:271-284.
33. Wu J., Kobayashi M., Sousa E.A., Liu W., Cai J., Goldman S.J., Dorner A.J., Projan S.J., Kavuru M.S., Qiu Y., Thomsaaen M.J. Mol. Cell. Proteomics 2005, 4:1251-1264.
34. Lewis J.A., Rao K.M., Castranova V., Vallyathan V., Dennis W.E., Knechtges P.L. Environ. Health Perspect. 2007, 115:756-763.
35. Signor L., Tigani B., Beckmann N., Falchetto R., Stoeckli M. Proteomics 2004, 4:2101-2110.
36. Bhoola K.D., Figueroa C.D., Worthy K. Pharmacol. Rev. 1992, 44:1-80.
37. Proud D., Kaplan A.P. Annu. Rev. Immunol. 1988, 6:49-83.
38. Yui S., Nakatani Y., Mikami M. Biol. Pharm. Bull. 2003, 26:753-760.
39. Berntzen H.B., Olmez U., Fagerhol M.K., Munthe E. Scand. J. Rheumatol. 1991, 20:74-82.
40. Tamboli C.P., Richard F., Colombel J.F. Gastroenterology 2003, 124:1972-1974.
41. Piquette C.A., Robinson-Hill R., Webster R.O. J. Leukoc. Biol. 1994, 55:349-354.
42. Brasch F., Birzele J., Ochs M., Guttentag S.H., Schoch O.D., Boehler A., Beers M.F., Muller K.M., Hawgood S., Johnen G. Eur. Respir. J. 2004, 24:426-435.
43. Koyama S., Rennard S.I., Robbins R.A. Am. J. Physiol. 1995, 269:L38-L44.
44. Wang J.Y., Shieh C.C., Yu C.K., Lei H.Y. Clin. Exp. Allergy 2001, 31:652-662.
45. Markova N.G., Marekov L.N., Chipev C.C., Gan S.Q., Idler W.W., Steinert P.M. Mol. Cell. Biol. 1993, 13:613-625.
46. Zhong C.Y., Zhou Y.M., Douglas G.C., Witschi H., Pinkerton K.E. Carcinogenesis 2005, 26:2187-2195.
47. Wu V.M., Beitel G.J. Curr. Opin. Cell Biol. 2004, 16:493-499.