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Volumn , Issue , 2008, Pages 75-84

Protein structure alignment through a contact topology profile using sabertooth

Author keywords

[No Author keywords available]

Indexed keywords

COLLECTIVE PROPERTIES; CONNECTIVITY PROFILE; CONTACT VECTORS; LOSSY STRUCTURES; PHYSICAL CONSTRAINTS; PROTEIN ALIGNMENT; PROTEIN STRUCTURE ALIGNMENT; PROTEIN STRUCTURES; STRUCTURE ALIGNMENT; VECTORIAL STRUCTURE;

EID: 77954029907     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper
Times cited : (1)

References (9)
  • 1
    • 58149292218 scopus 로고    scopus 로고
    • Effective connectivity profile: A structural representation that evidences the relationship between protein structures and sequences
    • [BOPT08]. (in print; doi: 10.1002/prot.22113)
    • [BOPT08] Ugo Bastolla, Angel R. Ortíz, Markus Porto, and Florian Teichert. Effective connectivity profile: A structural representation that evidences the relationship between protein structures and sequences. PROTEINS: Structure, Function, and Bioinformatics, 2008. (in print; doi: 10.1002/prot.22113).
    • (2008) PROTEINS: Structure, Function, and Bioinformatics
    • Bastolla, U.1    Ortíz, A.R.2    Porto, M.3    Teichert, F.4
  • 4
    • 14844314722 scopus 로고    scopus 로고
    • An analysis of core deformations in protein superfamilies
    • [LMLRL+05]
    • [LMLRL+05] Alexandra Leo-Macias, P. Lopez-Romero, D. Lupyan, D. Zerbino, and Angel R. Ortiz. An analysis of core deformations in protein superfamilies. Biophys J, 88(2):1291-1299, 2005.
    • (2005) Biophys J , vol.88 , Issue.2 , pp. 1291-1299
    • Leo-Macias, A.1    Lopez-Romero, P.2    Lupyan, D.3    Zerbino, D.4    Ortiz, A.R.5
  • 5
    • 0028961335 scopus 로고
    • SCOP: A structural classification of proteins database for the investigation of sequences and structures
    • [MBHC95]
    • [MBHC95] A. G. Murzin, S. E. Brenner, T. Hubbard, and C. Chothia. SCOP: a structural classification of proteins database for the investigation of sequences and structures. Journal of Molecular Biology, 247:536-540, 1995.
    • (1995) Journal of Molecular Biology , vol.247 , pp. 536-540
    • Murzin, A.G.1    Brenner, S.E.2    Hubbard, T.3    Chothia, C.4
  • 6
    • 3142558004 scopus 로고    scopus 로고
    • Reconstruction of protein structures from a vectorial representation
    • [PBRV04]
    • [PBRV04] Markus Porto, Ugo Bastolla, H.-Eduardo Roman, and Michele Vendruscolo. Reconstruction of Protein Structures from a Vectorial Representation. Physical Review Letters, 92(21):218101, 2004.
    • (2004) Physical Review Letters , vol.92 , Issue.21 , pp. 218101
    • Porto, M.1    Bastolla, U.2    Roman, H.-E.3    Vendruscolo, M.4
  • 7
    • 0033670439 scopus 로고    scopus 로고
    • MaxSub: An automated measure for the assessment of protein structure prediction quality
    • [SERF00]
    • [SERF00] Naomi Siew, Arne Elofsson, Leszek Rychlewski, and Daniel Fischer. MaxSub: An automated measure for the assessment of protein structure prediction quality. Bioinformatics, 16(9):776-785, 2000.
    • (2000) Bioinformatics , vol.16 , Issue.9 , pp. 776-785
    • Siew, N.1    Elofsson, A.2    Rychlewski, L.3    Fischer, D.4
  • 8
    • 39849110127 scopus 로고    scopus 로고
    • SABERTOOTH: Protein structural alignment based on a vectorial structure representation
    • [TBP07], 11. online
    • [TBP07] Florian Teichert, Ugo Bastolla, and Markus and Porto. SABERTOOTH: protein structural alignment based on a vectorial structure representation. BMC Bioinformatics, 8:425, 11 2007. Available online at http://www.fkp.tu- darmstadt.de/sabertooth/.
    • (2007) BMC Bioinformatics , vol.8 , pp. 425
    • Teichert, F.1    Bastolla, U.2    Markus3    Porto4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.