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Volumn 12, Issue 4, 2010, Pages 341-351

Systems-wide metabolic pathway engineering in Corynebacterium glutamicum for bio-based production of diaminopentane

Author keywords

Biopolymer; Cadaverine; Codon optimization; Lysine decarboxylase; N acetyl diaminopentane; Polyamide

Indexed keywords

ANAPLEROTIC ENZYMES; ASPARTOKINASE; BUILDING BLOCKES; CODON OPTIMIZATION; CODON USAGE; COFACTORS; CORYNEBACTERIUM GLUTAMICUM; DECARBOXYLASES; EFFICIENT PRODUCTION; FEEDBACK REGULATION; GRAM-POSITIVE BACTERIUM; HOMOSERINE; IN-VITRO; IN-VIVO; LYSINE DECARBOXYLASE; METABOLIC ANALYSIS; METABOLIC ENGINEERING; METABOLIC PATHWAY ENGINEERING; PHOSPHOENOLPYRUVATE CARBOXYKINASE; POINT MUTATIONS; PRODUCTION STRAIN; PYRUVATE CARBOXYLASE; RE-DESIGNING;

EID: 77953231876     PISSN: 10967176     EISSN: 10967184     Source Type: Journal    
DOI: 10.1016/j.ymben.2010.03.005     Document Type: Article
Times cited : (169)

References (43)
  • 1
    • 35348981360 scopus 로고    scopus 로고
    • Metabolic flux engineering of l-lysine production in Corynebacterium glutamicum-overexpression and modification of G6P dehydrogenase
    • Becker J., Klopprogge C., Herold A., Zelder O., Bolten C.J., and Wittmann C. Metabolic flux engineering of l-lysine production in Corynebacterium glutamicum-overexpression and modification of G6P dehydrogenase. J. Biotechnol. 132 2 (2007) 99-109
    • (2007) J. Biotechnol. , vol.132 , Issue.2 , pp. 99-109
    • Becker, J.1    Klopprogge, C.2    Herold, A.3    Zelder, O.4    Bolten, C.J.5    Wittmann, C.6
  • 2
    • 42449109972 scopus 로고    scopus 로고
    • Metabolic responses of Corynebacterium glutamicum to deletion of pyruvate kinase
    • Becker J., Klopprogge C., and Wittmann C. Metabolic responses of Corynebacterium glutamicum to deletion of pyruvate kinase. Microb. Cell Fact. 7 (2008) 8
    • (2008) Microb. Cell Fact. , vol.7 , pp. 8
    • Becker, J.1    Klopprogge, C.2    Wittmann, C.3
  • 3
    • 27744506402 scopus 로고    scopus 로고
    • Amplified expression of fructose 1,6-bisphosphatase in Corynebacterium glutamicum increases in vivo flux through the pentose phosphate pathway and lysine production on different carbon sources
    • Becker J., Klopprogge C., Zelder O., Heinzle E., and Wittmann C. Amplified expression of fructose 1,6-bisphosphatase in Corynebacterium glutamicum increases in vivo flux through the pentose phosphate pathway and lysine production on different carbon sources. Appl. Environ. Microbiol. 71 (2005) 8587-8596
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 8587-8596
    • Becker, J.1    Klopprogge, C.2    Zelder, O.3    Heinzle, E.4    Wittmann, C.5
  • 4
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72 (1976) 248-254
    • (1976) Anal. Biochem. , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 7
    • 0026726816 scopus 로고
    • Expression of the Bacillus subtilis sacB gene leads to sucrose sensitivity in the Gram-positive bacterium Corynebacterium glutamicum but not in Streptomyces lividans
    • Jäger W., Schafer A., Puhler A., Labes G., and Wohlleben W. Expression of the Bacillus subtilis sacB gene leads to sucrose sensitivity in the Gram-positive bacterium Corynebacterium glutamicum but not in Streptomyces lividans. J. Bacteriol. 174 (1992) 5462-5465
    • (1992) J. Bacteriol. , vol.174 , pp. 5462-5465
    • Jäger, W.1    Schafer, A.2    Puhler, A.3    Labes, G.4    Wohlleben, W.5
  • 8
    • 34147188076 scopus 로고    scopus 로고
    • SAMPI: protein identification with mass spectra alignments
    • Kaltenbach H.M., Wilke A., and Bocker S. SAMPI: protein identification with mass spectra alignments. BMC Bioinf. 8 (2007) 102
    • (2007) BMC Bioinf. , vol.8 , pp. 102
    • Kaltenbach, H.M.1    Wilke, A.2    Bocker, S.3
  • 12
    • 0347761177 scopus 로고    scopus 로고
    • Comparative metabolic flux analysis of lysine-producing Corynebacterium glutamicum cultured on glucose or fructose
    • Kiefer P., Heinzle E., Zelder O., and Wittmann C. Comparative metabolic flux analysis of lysine-producing Corynebacterium glutamicum cultured on glucose or fructose. Appl. Environ. Microbiol. 70 (2004) 229-239
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 229-239
    • Kiefer, P.1    Heinzle, E.2    Zelder, O.3    Wittmann, C.4
  • 13
    • 33748689568 scopus 로고    scopus 로고
    • Deregulation of aspartokinase by single nucleotide exchange leads to global flux rearrangement in the central metabolism of Corynebacterium glutamicum
    • Kim H.M., Heinzle E., and Wittmann C. Deregulation of aspartokinase by single nucleotide exchange leads to global flux rearrangement in the central metabolism of Corynebacterium glutamicum. J. Microbiol. Biotechnol. 16 (2006) 1174-1179
    • (2006) J. Microbiol. Biotechnol. , vol.16 , pp. 1174-1179
    • Kim, H.M.1    Heinzle, E.2    Wittmann, C.3
  • 14
    • 15544375310 scopus 로고    scopus 로고
    • In vivo quantification of intracellular amino acids and intermediates of the methionine pathway in Corynebacterium glutamicum
    • Krömer J.O., Fritz M., Heinzle E., and Wittmann C. In vivo quantification of intracellular amino acids and intermediates of the methionine pathway in Corynebacterium glutamicum. Anal. Biochem. 340 (2005) 171-173
    • (2005) Anal. Biochem. , vol.340 , pp. 171-173
    • Krömer, J.O.1    Fritz, M.2    Heinzle, E.3    Wittmann, C.4
  • 15
    • 30744448213 scopus 로고    scopus 로고
    • Accumulation of homolanthionine and activation of a novel pathway for isoleucine biosynthesis in Corynebacterium glutamicum McbR deletion strains
    • Krömer J.O., Heinzle E., Schröder H., and Wittmann C. Accumulation of homolanthionine and activation of a novel pathway for isoleucine biosynthesis in Corynebacterium glutamicum McbR deletion strains. J. Bacteriol. 188 (2006) 609-618
    • (2006) J. Bacteriol. , vol.188 , pp. 609-618
    • Krömer, J.O.1    Heinzle, E.2    Schröder, H.3    Wittmann, C.4
  • 16
    • 0028961757 scopus 로고
    • Isotopomer study of lipogenesis in human hepatoma cells in culture: contribution of carbon and hydrogen atoms from glucose
    • Lee W.N., Byerley L.O., Bassilian S., Ajie H.O., Clark I., Edmond J., and Bergner E.A. Isotopomer study of lipogenesis in human hepatoma cells in culture: contribution of carbon and hydrogen atoms from glucose. Anal. Biochem. 226 (1995) 100-112
    • (1995) Anal. Biochem. , vol.226 , pp. 100-112
    • Lee, W.N.1    Byerley, L.O.2    Bassilian, S.3    Ajie, H.O.4    Clark, I.5    Edmond, J.6    Bergner, E.A.7
  • 17
    • 0031931695 scopus 로고    scopus 로고
    • Expression of the second lysine decarboxylase gene of Escherichia coli
    • Lemonnier M., and Lane D. Expression of the second lysine decarboxylase gene of Escherichia coli. Microbiology 144 3 (1998) 751-760
    • (1998) Microbiology , vol.144 , Issue.3 , pp. 751-760
    • Lemonnier, M.1    Lane, D.2
  • 18
    • 0348013051 scopus 로고    scopus 로고
    • Hierarchy of sequence-dependent features associated with prokaryotic translation
    • Lithwick G., and Margalit H. Hierarchy of sequence-dependent features associated with prokaryotic translation. Genome Res. 13 (2003) 2665-2673
    • (2003) Genome Res. , vol.13 , pp. 2665-2673
    • Lithwick, G.1    Margalit, H.2
  • 19
    • 36148935215 scopus 로고    scopus 로고
    • Metabolic engineering of Corynebacterium glutamicum for cadaverine fermentation
    • Mimitsuka T., Sawai H., Hatsu M., and Yamada K. Metabolic engineering of Corynebacterium glutamicum for cadaverine fermentation. Biosci. Biotechnol. Biochem. 71 (2007) 2130-2135
    • (2007) Biosci. Biotechnol. Biochem. , vol.71 , pp. 2130-2135
    • Mimitsuka, T.1    Sawai, H.2    Hatsu, M.3    Yamada, K.4
  • 20
    • 64549091533 scopus 로고    scopus 로고
    • Optimization and scale-up of auccinic acid production by Mannheimia succiniciproducens LPK7J
    • Oh I.J., D. Kim H., Oh E.K., Lee S.Y., and Lee J. Optimization and scale-up of auccinic acid production by Mannheimia succiniciproducens LPK7J. Microbiol. Biotechnol. 19 (2009) 167-171
    • (2009) Microbiol. Biotechnol. , vol.19 , pp. 167-171
    • Oh, I.J.1    D. Kim, H.2    Oh, E.K.3    Lee, S.Y.4    Lee, J.5
  • 21
    • 11144261828 scopus 로고    scopus 로고
    • A novel gnd mutation leading to increased l-lysine production in Corynebacterium glutamicum
    • Ohnishi J., Katahira R., Mitsuhashi S., Kakita S., and Ikeda M. A novel gnd mutation leading to increased l-lysine production in Corynebacterium glutamicum. FEMS Microbiol. Lett. 242 (2005) 265-274
    • (2005) FEMS Microbiol. Lett. , vol.242 , pp. 265-274
    • Ohnishi, J.1    Katahira, R.2    Mitsuhashi, S.3    Kakita, S.4    Ikeda, M.5
  • 22
    • 0036161274 scopus 로고    scopus 로고
    • A novel methodology of employing Corynebacterium glutamicum genome information to generate a new l-lysine-producing mutant
    • Ohnishi J., Mitsuhashi S., Hayashi M., Ando S., Yokoi H., Ochiai K., and Ikeda M. A novel methodology of employing Corynebacterium glutamicum genome information to generate a new l-lysine-producing mutant. Appl. Microbiol. Biotechnol. 58 (2002) 217-223
    • (2002) Appl. Microbiol. Biotechnol. , vol.58 , pp. 217-223
    • Ohnishi, J.1    Mitsuhashi, S.2    Hayashi, M.3    Ando, S.4    Yokoi, H.5    Ochiai, K.6    Ikeda, M.7
  • 23
    • 53049087092 scopus 로고    scopus 로고
    • Towards systems metabolic engineering of microorganisms for amino acid production
    • Park J.H., and Lee S.Y. Towards systems metabolic engineering of microorganisms for amino acid production. Curr. Opin. Biotechnol. 19 (2008) 454-460
    • (2008) Curr. Opin. Biotechnol. , vol.19 , pp. 454-460
    • Park, J.H.1    Lee, S.Y.2
  • 24
    • 34548699948 scopus 로고    scopus 로고
    • Characteristics of methionine production by an engineered Corynebacterium glutamicum strain
    • Park S.D., Lee J.Y., Sim S.Y., Kim Y., and Lee H.S. Characteristics of methionine production by an engineered Corynebacterium glutamicum strain. Metab. Eng. 9 (2007) 327-336
    • (2007) Metab. Eng. , vol.9 , pp. 327-336
    • Park, S.D.1    Lee, J.Y.2    Sim, S.Y.3    Kim, Y.4    Lee, H.S.5
  • 27
    • 0034680782 scopus 로고    scopus 로고
    • In vivo quantification of parallel and bidirectional fluxes in the anaplerosis of Corynebacterium glutamicum
    • Petersen S., de Graaf A.A., Eggeling L., Möllney M., Wiechert W., and Sahm H. In vivo quantification of parallel and bidirectional fluxes in the anaplerosis of Corynebacterium glutamicum. J. Biol. Chem. 275 (2000) 35932-35941
    • (2000) J. Biol. Chem. , vol.275 , pp. 35932-35941
    • Petersen, S.1    de Graaf, A.A.2    Eggeling, L.3    Möllney, M.4    Wiechert, W.5    Sahm, H.6
  • 28
    • 0033782932 scopus 로고    scopus 로고
    • Pathway analysis and metabolic engineering in Corynebacterium glutamicum
    • Sahm H., Eggeling L., and de Graaf A.A. Pathway analysis and metabolic engineering in Corynebacterium glutamicum. Biol. Chem. 381 (2000) 899-910
    • (2000) Biol. Chem. , vol.381 , pp. 899-910
    • Sahm, H.1    Eggeling, L.2    de Graaf, A.A.3
  • 29
    • 57249097164 scopus 로고    scopus 로고
    • Simultaneous utilization of d-cellobiose, d-glucose, and d-xylose by recombinant Corynebacterium glutamicum under oxygen-deprived conditions
    • Sasaki M., Jojima T., Inui M., and Yukawa H. Simultaneous utilization of d-cellobiose, d-glucose, and d-xylose by recombinant Corynebacterium glutamicum under oxygen-deprived conditions. Appl. Microbiol. Biotechnol. 81 (2008) 691-699
    • (2008) Appl. Microbiol. Biotechnol. , vol.81 , pp. 691-699
    • Sasaki, M.1    Jojima, T.2    Inui, M.3    Yukawa, H.4
  • 30
    • 73349135662 scopus 로고    scopus 로고
    • Engineering of pentose transport in Corynebacterium glutamicum to improve simultaneous utilization of mixed sugars
    • Sasaki M., Jojima T., Kawaguchi H., Inui M., and Yukawa H. Engineering of pentose transport in Corynebacterium glutamicum to improve simultaneous utilization of mixed sugars. Appl. Microbiol. Biotechnol. 85 1 (2009) 105-115
    • (2009) Appl. Microbiol. Biotechnol. , vol.85 , Issue.1 , pp. 105-115
    • Sasaki, M.1    Jojima, T.2    Kawaguchi, H.3    Inui, M.4    Yukawa, H.5
  • 31
    • 3042653176 scopus 로고    scopus 로고
    • Catabolism of polyamines
    • Seiler N. Catabolism of polyamines. Amino Acids 26 3 (2004) 217-233
    • (2004) Amino Acids , vol.26 , Issue.3 , pp. 217-233
    • Seiler, N.1
  • 32
    • 27844566753 scopus 로고    scopus 로고
    • Non-biodegradable biopolymers from renewable resources: perspectives and impacts
    • Steinbüchel A. Non-biodegradable biopolymers from renewable resources: perspectives and impacts. Curr. Opin. Biotechnol. 16 (2005) 607-613
    • (2005) Curr. Opin. Biotechnol. , vol.16 , pp. 607-613
    • Steinbüchel, A.1
  • 33
    • 34247584112 scopus 로고    scopus 로고
    • Production of l-lysine from starch by Corynebacterium glutamicum displaying alpha-amylase on its cell surface
    • Tateno T., Fukuda H., and Kondo A. Production of l-lysine from starch by Corynebacterium glutamicum displaying alpha-amylase on its cell surface. Appl. Microbiol. Biotechnol. 74 (2007) 1213-1220
    • (2007) Appl. Microbiol. Biotechnol. , vol.74 , pp. 1213-1220
    • Tateno, T.1    Fukuda, H.2    Kondo, A.3
  • 34
    • 58549095930 scopus 로고    scopus 로고
    • Direct production of cadaverine from soluble starch using Corynebacterium glutamicum coexpressing alpha-amylase and lysine decarboxylase
    • Tateno T., Okada Y., Tsuchidate T., Tanaka T., Fukuda H., and Kondo A. Direct production of cadaverine from soluble starch using Corynebacterium glutamicum coexpressing alpha-amylase and lysine decarboxylase. Appl. Microbiol. Biotechnol. 82 (2009) 115-121
    • (2009) Appl. Microbiol. Biotechnol. , vol.82 , pp. 115-121
    • Tateno, T.1    Okada, Y.2    Tsuchidate, T.3    Tanaka, T.4    Fukuda, H.5    Kondo, A.6
  • 35
    • 0028797750 scopus 로고
    • Regulation of the efflux of putrescine and cadaverine from rapidly growing cultured RAW 264 cells by extracellular putrescine
    • Tjandrawinata R.R., and Byus C.V. Regulation of the efflux of putrescine and cadaverine from rapidly growing cultured RAW 264 cells by extracellular putrescine. Biochem. J. 305 1 (1995) 291-299
    • (1995) Biochem. J. , vol.305 , Issue.1 , pp. 291-299
    • Tjandrawinata, R.R.1    Byus, C.V.2
  • 36
    • 77953233245 scopus 로고    scopus 로고
    • Analysis of polyhydroxybutyrate flux limitations by systematic genetic and metabolic perturbations
    • Tyo K.E., Fischer C.R., Simeon F., and Stephanopoulos G. Analysis of polyhydroxybutyrate flux limitations by systematic genetic and metabolic perturbations. Metab. Eng (2009)
    • (2009) Metab. Eng
    • Tyo, K.E.1    Fischer, C.R.2    Simeon, F.3    Stephanopoulos, G.4
  • 37
    • 0027572102 scopus 로고
    • Metabolic flux distributions in Corynebacterium glutamicum during growth and lysine overproduction
    • Vallino J.J., and Stephanopoulos G. Metabolic flux distributions in Corynebacterium glutamicum during growth and lysine overproduction. Biotechnol. Bioeng. 41 (1993) 633-646
    • (1993) Biotechnol. Bioeng. , vol.41 , pp. 633-646
    • Vallino, J.J.1    Stephanopoulos, G.2
  • 38
    • 11244299779 scopus 로고    scopus 로고
    • Industrial bioconversion of renewable resources as an alternative to conventional chemistry
    • Willke T., and Vorlop K.D. Industrial bioconversion of renewable resources as an alternative to conventional chemistry. Appl. Microbiol. Biotechnol. 66 (2004) 131-142
    • (2004) Appl. Microbiol. Biotechnol. , vol.66 , pp. 131-142
    • Willke, T.1    Vorlop, K.D.2
  • 39
    • 35349022590 scopus 로고    scopus 로고
    • The l-lysine story: from metabolic pathways to industrial production
    • Springer, Berlin/Heidelberg
    • Wittmann C., and Becker J. The l-lysine story: from metabolic pathways to industrial production. Microbiology Monographs (2007), Springer, Berlin/Heidelberg
    • (2007) Microbiology Monographs
    • Wittmann, C.1    Becker, J.2
  • 40
    • 0037102384 scopus 로고    scopus 로고
    • In vivo analysis of intracellular amino acid labeling by GC/MS
    • Wittmann C., Hans M., and Heinzle E. In vivo analysis of intracellular amino acid labeling by GC/MS. Anal. Biochem. 307 (2002) 379-382
    • (2002) Anal. Biochem. , vol.307 , pp. 379-382
    • Wittmann, C.1    Hans, M.2    Heinzle, E.3
  • 41
    • 10444258178 scopus 로고    scopus 로고
    • Metabolic fluxes in Corynebacterium glutamicum during lysine production with sucrose as carbon source
    • Wittmann C., Kiefer P., and Zelder O. Metabolic fluxes in Corynebacterium glutamicum during lysine production with sucrose as carbon source. Appl. Environ. Microbiol. 70 (2004) 7277-7287
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 7277-7287
    • Wittmann, C.1    Kiefer, P.2    Zelder, O.3
  • 42
    • 0030808549 scopus 로고    scopus 로고
    • The Escherichia coli ldcC gene encodes another lysine decarboxylase, probably a constitutive enzyme
    • Yamamoto Y., Miwa Y., Miyoshi K., Furuyama J., and Ohmori H. The Escherichia coli ldcC gene encodes another lysine decarboxylase, probably a constitutive enzyme. Genes Genet. Syst. 72 (1997) 167-172
    • (1997) Genes Genet. Syst. , vol.72 , pp. 167-172
    • Yamamoto, Y.1    Miwa, Y.2    Miyoshi, K.3    Furuyama, J.4    Ohmori, H.5
  • 43
    • 33747792475 scopus 로고    scopus 로고
    • Respirometric 13C flux analysis, Part I: design, construction and validation of a novel multiple reactor system using on-line membrane inlet mass spectrometry
    • Yang T.H., Wittmann C., and Heinzle E. Respirometric 13C flux analysis, Part I: design, construction and validation of a novel multiple reactor system using on-line membrane inlet mass spectrometry. Metab. Eng. 8 5 (2006) 417-431
    • (2006) Metab. Eng. , vol.8 , Issue.5 , pp. 417-431
    • Yang, T.H.1    Wittmann, C.2    Heinzle, E.3


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