메뉴 건너뛰기




Volumn 156, Issue 6, 2010, Pages 1632-1641

Transcriptional regulation of the Bacillus subtilis asnH operon and role of the 5′-proximal long sequence triplication in RNA stabilization

Author keywords

[No Author keywords available]

Indexed keywords

BETA GALACTOSIDASE; MESSENGER RNA; RIFAMPICIN;

EID: 77953213738     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/mic.0.036582-0     Document Type: Article
Times cited : (3)

References (36)
  • 1
    • 0029947261 scopus 로고    scopus 로고
    • STAB-SD: A Shine-Dalgarno sequence in the 5′ untranslated region is a determinant of mRNA stability
    • Agaisse, H. & Lereclus, D. (1996). STAB-SD: a Shine-Dalgarno sequence in the 5′ untranslated region is a determinant of mRNA stability. Mol Microbiol 20, 633-643. (Pubitemid 126424678)
    • (1996) Molecular Microbiology , vol.20 , Issue.3 , pp. 633-643
    • Agaisse, H.1    Lereclus, D.2
  • 2
    • 0031951386 scopus 로고    scopus 로고
    • MRNA stabilization by the ompA 5' untranslated region: Two protective elements hinder distinct pathways for mRNA degradation
    • Arnold, T. E., Yu, J. & Belasco, J. G. (1998). mRNA stabilization by the ompA 59 untranslated region: two protective elements hinder distinct pathways for mRNA degradation. RNA 4, 319-330. (Pubitemid 28117711)
    • (1998) RNA , vol.4 , Issue.3 , pp. 319-330
    • Arnold, T.E.1    Yu, J.2    Belasco, J.G.3
  • 3
    • 38949153839 scopus 로고    scopus 로고
    • Genetic and biochemical analysis of CodY-binding sites in Bacillus subtilis
    • Belitsky, B. R. & Sonenshein, A. L. (2008). Genetic and biochemical analysis of CodY-binding sites in Bacillus subtilis. J Bacteriol 190, 1224-1236.
    • (2008) J Bacteriol , vol.190 , pp. 1224-1236
    • Belitsky, B.R.1    Sonenshein, A.L.2
  • 4
    • 0032893806 scopus 로고    scopus 로고
    • Suppressor analysis of mutations in the 5'-untranslated region of COB mRNA identifies components of general pathways for mitochondrial mRNA processing and decay in Saccharomyces cerevisiae
    • Chen, W., Islas-Osuna, M. A. & Dieckmann, C. L. (1999). Suppressor analysis of mutations in the 5′-untranslated region of COB mRNA identifies components of general pathways for mitochondrial mRNA processing and decay in Saccharomyces cerevisiae. Genetics 151, 1315-1325. (Pubitemid 29177545)
    • (1999) Genetics , vol.151 , Issue.4 , pp. 1315-1325
    • Chen, W.1    Islas-Osuna, M.A.2    Dieckmann, C.L.3
  • 6
    • 0032950276 scopus 로고    scopus 로고
    • Regulation of nitrogen metabolism in Bacillus subtilis: Vive la diffe′rence
    • Fisher, S. H. (1999). Regulation of nitrogen metabolism in Bacillus subtilis: vive la diffe′rence. Mol Microbiol 32, 223-232.
    • (1999) Mol Microbiol , vol.32 , pp. 223-232
    • Fisher, S.H.1
  • 7
    • 0035986640 scopus 로고    scopus 로고
    • A 5′ stem-loop and ribosome binding but not translation are important for the stability of Bacillus subtilis aprE leader mRNA
    • Hambraeus, G., Karhumaa, K. & Rutberg, B. (2002). A 5′ stem-loop and ribosome binding but not translation are important for the stability of Bacillus subtilis aprE leader mRNA. Microbiology 148, 1795-1803. (Pubitemid 34679033)
    • (2002) Microbiology , vol.148 , Issue.6 , pp. 1795-1803
    • Hambraeus, G.1    Karhumaa, K.2    Rutberg, B.3
  • 8
  • 9
    • 2442435703 scopus 로고    scopus 로고
    • Identification of AbrB-regulated genes involved in biofilm formation by Bacillus subtilis
    • Hamon, M. A., Stanley, N. R., Britton, R. A., Grossman, A. D. & Lazazzera, B. A. (2004). Identification of AbrB-regulated genes involved in biofilm formation by Bacillus subtilis. Mol Microbiol 52, 847-860.
    • (2004) Mol Microbiol , vol.52 , pp. 847-860
    • Hamon, M.A.1    Stanley, N.R.2    Britton, R.A.3    Grossman, A.D.4    Lazazzera, B.A.5
  • 11
    • 0034159917 scopus 로고    scopus 로고
    • Evaluation and characterization of catabolite-responsive elements (cre) of Bacillus subtilis
    • Miwa, Y., Nakata, A., Ogiwara, A., Yamamoto, M. & Fujita, Y. (2000). Evaluation and characterization of catabolite-responsive elements (cre) of Bacillus subtilis. Nucleic Acids Res 28, 1206-1210. (Pubitemid 30107692)
    • (2000) Nucleic Acids Research , vol.28 , Issue.5 , pp. 1206-1210
    • Miwa, Y.1    Nakata, A.2    Ogiwara, A.3    Yamamoto, M.4    Fujita, Y.5
  • 12
    • 0037336206 scopus 로고    scopus 로고
    • Additional targets of the Bacillus subtilis global regulator CodY identified by chromatin immunoprecipitation and genome-wide transcript analysis
    • Molle, V., Nakaura, Y., Shivers, R. P., Yamaguchi, H., Losick, R., Fujita, Y. & Sonenshein, A. L. (2003). Additional targets of the Bacillus subtilis global regulator CodY identified by chromatin immunoprecipitation and genome-wide transcript analysis. J Bacteriol 185, 1911-1922.
    • (2003) J Bacteriol , vol.185 , pp. 1911-1922
    • Molle, V.1    Nakaura, Y.2    Shivers, R.P.3    Yamaguchi, H.4    Losick, R.5    Fujita, Y.6    Sonenshein, A.L.7
  • 13
    • 0031033042 scopus 로고    scopus 로고
    • Expression of AbrB, a transition state regulator from Bacillus subtilis, is growth phase dependent in a manner resembling that of Fis, the nucleoid binding protein from Escherichia coli
    • O'Reilly, M. & Devine, K. M. (1997). Expression of AbrB, a transition state regulator from Bacillus subtilis, is growth phase dependent in a manner resembling that of Fis, the nucleoid binding protein from Escherichia coli. J Bacteriol 179, 522-529. (Pubitemid 27030407)
    • (1997) Journal of Bacteriology , vol.179 , Issue.2 , pp. 522-529
    • O'Reilly, M.1    Devine, K.M.2
  • 14
    • 0024118243 scopus 로고
    • Structure of the gene for the transition state regulator, abrB: Regulator synthesis is controlled by the spo0A sporulation gene in Bacillus subtilis
    • Perego, M., Spiegelman, G. B. & Hoch, J. A. (1988). Structure of the gene for the transition state regulator, abrB: regulator synthesis is controlled by the spo0A sporulation gene in Bacillus subtilis. Mol Microbiol 2, 689-699.
    • (1988) Mol Microbiol , vol.2 , pp. 689-699
    • Perego, M.1    Spiegelman, G.B.2    Hoch, J.A.3
  • 15
    • 0036202545 scopus 로고    scopus 로고
    • Bacillus subtilis sporulation and stationary phase gene expression
    • Phillips, Z. E. & Strauch, M. A. (2002). Bacillus subtilis sporulation and stationary phase gene expression. Cell Mol Life Sci 59, 392-402.
    • (2002) Cell Mol Life Sci , vol.59 , pp. 392-402
    • Phillips, Z.E.1    Strauch, M.A.2
  • 16
    • 0035336771 scopus 로고    scopus 로고
    • Bacillus subtilis CodY represses early-stationary-phase genes by sensing GTP levels
    • Ratnayake-Lecamwasam, M., Serror, P., Wong, K. W. & Sonenshein, A. L. (2001). Bacillus subtilis CodY represses early-stationary-phase genes by sensing GTP levels. Genes Dev 15, 1093-1103.
    • (2001) Genes Dev , vol.15 , pp. 1093-1103
    • Ratnayake-Lecamwasam, M.1    Serror, P.2    Wong, K.W.3    Sonenshein, A.L.4
  • 17
    • 0034705289 scopus 로고    scopus 로고
    • The RNA binding protein Pub1 modulates the stability of transcripts containing upstream open reading frames
    • Ruiz-Echevarria, M. J. & Peltz, S. W. (2000). The RNA binding protein Pub1 modulates the stability of transcripts containing upstream open reading frames. Cell 101, 741-751.
    • (2000) Cell , vol.101 , pp. 741-751
    • Ruiz-Echevarria, M.J.1    Peltz, S.W.2
  • 20
    • 1642415938 scopus 로고    scopus 로고
    • Systematic analysis of SigD-regulated genes in Bacillus subtilis by DNA microarray and Northern blotting analyses
    • Serizawa, M., Yamamoto, H., Yamaguchi, H., Fujita, Y., Kobayashi, K., Ogasawara, N. & Sekiguchi, J. (2004). Systematic analysis of SigD-regulated genes in Bacillus subtilis by DNA microarray and Northern blotting analyses. Gene 329, 125-136.
    • (2004) Gene , vol.329 , pp. 125-136
    • Serizawa, M.1    Yamamoto, H.2    Yamaguchi, H.3    Fujita, Y.4    Kobayashi, K.5    Ogasawara, N.6    Sekiguchi, J.7
  • 21
    • 0022445885 scopus 로고
    • Construction of a single-copy integration vector and its use in analysis of regulation of the trp operon of Bacillus subtilis
    • Shimotsu, H. & Henner, D. J. (1986). Construction of a single-copy integration vector and its use in analysis of regulation of the trp operon of Bacillus subtilis. Gene 43, 85-94. (Pubitemid 16011528)
    • (1986) Gene , vol.43 , Issue.1-2 , pp. 85-94
    • Shimotsu, H.1    Henner, D.J.2
  • 22
    • 3242880574 scopus 로고    scopus 로고
    • Activation of the Bacillus subtilis global regulator CodY by direct interaction with branchedchain amino acids
    • Shivers, R. P. & Sonenshein, A. L. (2004). Activation of the Bacillus subtilis global regulator CodY by direct interaction with branchedchain amino acids. Mol Microbiol 53, 599-611.
    • (2004) Mol Microbiol , vol.53 , pp. 599-611
    • Shivers, R.P.1    Sonenshein, A.L.2
  • 23
    • 0028354905 scopus 로고
    • Plasmids designed to alter the antibiotic resistance expressed by insertion mutations in Bacillus subtilis, through in vivo recombination
    • Steinmetz, M. & Richter, R. (1994). Plasmids designed to alter the antibiotic resistance expressed by insertion mutations in Bacillus subtilis, through in vivo recombination. Gene 142, 79-83.
    • (1994) Gene , vol.142 , pp. 79-83
    • Steinmetz, M.1    Richter, R.2
  • 24
    • 0031737309 scopus 로고    scopus 로고
    • A vector for systematic gene inactivation in Bacillus subtilis
    • Vagner, V., Dervyn, E. & Ehrlich, S. D. (1998). A vector for systematic gene inactivation in Bacillus subtilis. Microbiology 144, 3097-3104. (Pubitemid 28515588)
    • (1998) Microbiology , vol.144 , Issue.11 , pp. 3097-3104
    • Vagner, V.1    Dervyn, E.2    Ehrlich, S.D.3
  • 25
    • 0033669306 scopus 로고    scopus 로고
    • Novel DNA binding domain and genetic regulation model of Bacillus subtilis transition state regulator AbrB
    • Vaughn, J. L., Feher, V., Naylor, S., Strauch, M. A. & Cavanagh, J. (2000). Novel DNA binding domain and genetic regulation model of Bacillus subtilis transition state regulator AbrB. Nat Struct Biol 7, 1139-1146.
    • (2000) Nat Struct Biol , vol.7 , pp. 1139-1146
    • Vaughn, J.L.1    Feher, V.2    Naylor, S.3    Strauch, M.A.4    Cavanagh, J.5
  • 26
    • 66149086177 scopus 로고    scopus 로고
    • Identification of the asparagine synthase responsible for D-Asp amidation in the Lactococcus lactis peptidoglycan interpeptide crossbridge
    • Veiga, P., Erkelenz, M., Bernard, E., Courtin, P., Kulakauskas, S. & Chapot-Chartier, M. P. (2009). Identification of the asparagine synthase responsible for D-Asp amidation in the Lactococcus lactis peptidoglycan interpeptide crossbridge. J Bacteriol 191, 3752-3757.
    • (2009) J Bacteriol , vol.191 , pp. 3752-3757
    • Veiga, P.1    Erkelenz, M.2    Bernard, E.3    Courtin, P.4    Kulakauskas, S.5    Chapot-Chartier, M.P.6
  • 27
    • 70350447811 scopus 로고    scopus 로고
    • Genetic and biochemical analysis of the interaction of Bacillus subtilis CodY with branchedchain amino acids
    • Villapakkam, A. C., Handke, L. D., Belitsky, B. R., Levdikov, V. M., Wilkinson, A. J. & Sonenshein, A. L. (2009). Genetic and biochemical analysis of the interaction of Bacillus subtilis CodY with branchedchain amino acids. J Bacteriol 191, 6865-6876.
    • (2009) J Bacteriol , vol.191 , pp. 6865-6876
    • Villapakkam, A.C.1    Handke, L.D.2    Belitsky, B.R.3    Levdikov, V.M.4    Wilkinson, A.J.5    Sonenshein, A.L.6
  • 28
    • 0034978978 scopus 로고    scopus 로고
    • DNA-binding activity of aminoterminal domains of the Bacillus subtilis AbrB protein
    • Xu, K. & Strauch, M. A. (2001). DNA-binding activity of aminoterminal domains of the Bacillus subtilis AbrB protein. J Bacteriol 183, 4094-4098.
    • (2001) J Bacteriol , vol.183 , pp. 4094-4098
    • Xu, K.1    Strauch, M.A.2
  • 29
    • 69949109978 scopus 로고    scopus 로고
    • Processing and stability of inducibly expressed rpsO mRNA derivatives in Bacillus subtilis
    • Yao, S. & Bechhofer, D. H. (2009). Processing and stability of inducibly expressed rpsO mRNA derivatives in Bacillus subtilis. J Bacteriol 191, 5680-5689.
    • (2009) J Bacteriol , vol.191 , pp. 5680-5689
    • Yao, S.1    Bechhofer, D.H.2
  • 30
    • 0027298712 scopus 로고
    • Missense mutations in the Bacillus subtilis gnt repressor that diminish operator binding ability
    • Yoshida, K., Fujita, Y. & Sarai, A. (1993). Missense mutations in the Bacillus subtilis gnt repressor that diminish operator binding ability. J Mol Biol 231, 167-174.
    • (1993) J Mol Biol , vol.231 , pp. 167-174
    • Yoshida, K.1    Fujita, Y.2    Sarai, A.3
  • 31
    • 0029189180 scopus 로고
    • Cloning and sequencing of a 36-kb region of the Bacillus subtilis genome between the gnt and iol operons
    • Yoshida, K., Seki, S., Fujimura, M., Miwa, Y. & Fujita, Y. (1995). Cloning and sequencing of a 36-kb region of the Bacillus subtilis genome between the gnt and iol operons. DNA Res 2, 61-69.
    • (1995) DNA Res , vol.2 , pp. 61-69
    • Yoshida, K.1    Seki, S.2    Fujimura, M.3    Miwa, Y.4    Fujita, Y.5
  • 32
    • 0032871255 scopus 로고    scopus 로고
    • Three asparagine synthetase genes of Bacillus subtilis
    • Yoshida, K., Fujita, Y. & Ehrlich, S. D. (1999). Three asparagine synthetase genes of Bacillus subtilis. J Bacteriol 181, 6081-6091. (Pubitemid 29459919)
    • (1999) Journal of Bacteriology , vol.181 , Issue.19 , pp. 6081-6091
    • Yoshida, K.-I.1    Fujita, Y.2    Ehrlich, S.D.3
  • 33
    • 0034018764 scopus 로고    scopus 로고
    • Systematic study of gene expression and transcription organization in the gntZ-ywaA region of the Bacillus subtilis genome
    • Yoshida, K., Ishio, I., Nagakawa, E., Yamamoto, Y., Yamamoto, M. & Fujita, Y. (2000). Systematic study of gene expression and transcription organization in the gntZ-ywaA region of the Bacillus subtilis genome. Microbiology 146, 573-579. (Pubitemid 30157652)
    • (2000) Microbiology , vol.146 , Issue.3 , pp. 573-579
    • Yoshida, K.-I.1    Ishio, I.2    Nagakawa, E.3    Yamamoto, Y.4    Yamamoto, M.5    Fujita, Y.6
  • 35
    • 0036158163 scopus 로고    scopus 로고
    • Identification of two myo-inositol transporter genes of Bacillus subtilis
    • Yoshida, K., Yamamoto, Y., Omae, K., Yamamoto, M. & Fujita, Y. (2002). Identification of two myo-inositol transporter genes of Bacillus subtilis. J Bacteriol 184, 983-991.
    • (2002) J Bacteriol , vol.184 , pp. 983-991
    • Yoshida, K.1    Yamamoto, Y.2    Omae, K.3    Yamamoto, M.4    Fujita, Y.5
  • 36
    • 0037709014 scopus 로고    scopus 로고
    • Identification of additional TnrA-regulated genes of Bacillus subtilis associated with a TnrA box
    • Yoshida, K., Yamaguchi, H., Kinehara, M., Ohki, Y., Nakaura, Y. & Fujita, Y. (2003). Identification of additional TnrA-regulated genes of Bacillus subtilis associated with a TnrA box. Mol Microbiol 49, 157-165.
    • (2003) Mol Microbiol , vol.49 , pp. 157-165
    • Yoshida, K.1    Yamaguchi, H.2    Kinehara, M.3    Ohki, Y.4    Nakaura, Y.5    Fujita, Y.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.