Importance of the αc-helix in the cyclic nucleotide binding domain for the stable channel regulation and function of cyclic nucleotide gated ion channels in arabidopsis

Journal of Experimental Botany

Volumn 61, Issue 9, 2010, Pages 2383-2393

  Chin, Kimberley ^a   Moeder, Wolfgang ^a   Abdel Hamid, Huda ^a   Shahinas, Dea ^a   Gupta, Deepali ^a   Yoshioka, Keiko ^a  

^a UNIVERSITY OF TORONTO   (Canada)

Author keywords

Calcium ion channel; CNGC; Cpr22; Cyclic nucleotide gated ion channel; Environment; Programmed cell death; Temperature

Indexed keywords

ANIMALIA; ARABIDOPSIS;

ARABIDOPSIS PROTEIN; CNGC11 PROTEIN, ARABIDOPSIS; CNGC12 PROTEIN, ARABIDOPSIS; CYCLIC NUCLEOTIDE GATED CHANNEL;

AMINO ACID SEQUENCE; ARABIDOPSIS; ARTICLE; CHEMISTRY; CONFORMATION; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; MOLECULAR GENETICS; PROTEIN SECONDARY STRUCTURE; PROTEIN TERTIARY STRUCTURE; SEQUENCE ALIGNMENT;

AMINO ACID SEQUENCE; ARABIDOPSIS; ARABIDOPSIS PROTEINS; CYCLIC NUCLEOTIDE-GATED CATION CHANNELS; GENE EXPRESSION REGULATION, PLANT; MOLECULAR CONFORMATION; MOLECULAR SEQUENCE DATA; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; SEQUENCE ALIGNMENT;

EID: 77952963122     PISSN: 00220957     EISSN: 14602431     Source Type: Journal    
DOI: 10.1093/jxb/erq072     Document Type: Article

References (38)

1. Ali R, Zielinski RE, Berkowitz GA. 2006. Expression of plant cyclic nucleotide-gated cation channels in yeast. Journal of Experimental Botany 57, 125-138.
2. 2+ hypersensitivity in transgenic plants. The Plant Journal 20, 171-182.
3. Arazi T, Kaplan B, Fromm H. 2000. A high-affinity calmodulin-binding site in tobacco plasma-membrane channel protein coincides with a characteristic element of cyclic nucleotide-binding domains. Plant Molecular Biology 42, 591-601.
4. Ausubel FM, Bent R, Kingston RE, Moore DD, Seidman JG, Smith JA, Struhl K. 1987. Current protocols in molecular biology. New York: John Wiley and Sons.
5. Baxter J, Moeder W, Urquhart W, Shahinas D, Chin K, Christendat D, Kang HG, Angelova M, Kato N, Yoshioka K. 2008. Identification of a functionally essential amino acid for Arabidopsis cyclic nucleotide gated ion channels using the chimeric AtCNGC11/12 gene. The Plant Journal 56, 457-469.
6. Bridges D, Fraser ME, Moorhead GBG. 2005. Cyclic nucleotide bindning proteins in the Arabidopsis thaliana and Oryza sativa genomes. BMC Bioinformatics 11, 6.
7. Chin K, Moeder W, Yoshioka K. 2009. Biological roles of cyclic-nucleotide-gated ion channels in plants: what we know and don't know about this 20 member ion channel family. Botany 87, 668-677.
8. DeLano WL. 2002. The PyMOL molecular graphics system. Palo Alto, CA, USA: DeLano Scientific.
9. Fesenko EE, Kolesnikov SS, Lyubarsky AL. 1985. Induction by cyclic GMP of cationic conductance in plasma membrane of retinal rod outer segment. Nature 313, 310-313.
10. Fischer M, Schnell N, Chattaway J, Davies P, Dixon G, Sanders D. 1997. The Saccharomyces cerevisiae CCH1 gene is involved in calcium influx and mating. FEBS Letters 419, 259-262.
11. Flynn GE, Black KD, Islas LD, Sankaran B, Zagotta WN. 2007. Structure and rearrangements in the carboxy-terminal region of SpIH channels. Structure 15, 671-682.
12. Hua BG, Mercier RW, Zielinski RE, Berkowitz GA. 2003. Functional interaction of calmodulin with a plant cyclic nucleotide gated cation channel. Plant Physiology and Biochemistry 41, 945-954.
13. Kaplan B, Sherman T, Fromm H. 2007. Cyclic nucleotide-gated channels in plants. FEBS Letters 581, 2237-2246.
14. Kaupp UB, Seifert R. 2002. Cyclic nucleotide-gated ion channels. Physiological Reviews 82, 769-824.
15. Kelley LA, Sternberg MJE. 2009. Protein structure prediction on the web: a case study using the Phyre server. Nature Protocols 4, 363-371.
16. Köhler C, Merkle T, Neuhaus G. 1999. Characterization of a novel gene family of putative cyclic nucleotide-and calmodulin-regulated ion channels in Arabidopsis thaliana. The Plant Journal 18, 97-104.
17. Köhler C, Neuhaus G. 2000. Characterisation of calmodulin binding to cyclic nucleotide-gated ion channels from Arabidopsis thaliana. FEBS Letters 4710, 133-136.
18. 2+ influx and regulation of growth and development in rice. Plant and Cell Physiology 45, 693-702.
19. Leng Q, Mercier RW, Yao W, Berkowitz GA. 1999. Cloning and first functional characterization of a plant cyclic nucleotide-gated cation channel. Plant Physiology 121, 753-761.
20. 2+ in yeast. Molecular Cell Biology 29, 6686-6694
21. Mäser P, Thomine S, Schroeder JI, et al. 2001. Phylogenetic relationships within cation transporter families of Arabidopsis. Plant Physiology 126, 1646-1667.
22. + uptake yeast mutant as a functional assay of plant cyclic nucleotide gated cation channels. Plant Physiology and Biochemistry 42, 529-536.
23. Moeder W, Yoshioka K. 2009. Environmental sensitivity in pathogen resistant Arabidopsis mutants. In: Yoshioka K, Shinozaki K, eds. Signal crosstalk in plant stress responses. Ames, IA: Wiley-Blackwell, 113-135.
24. Mosher S, Moeder W, Nishimura N, Jikumaru Y, Joo SH, Urquhart W, Klessig DF, Kim SK, Nambara E, Yoshioka K. 2010. The lesion mimic mutant cpr22 shows alterations in abscisic acid signaling and abscisic acid insensitivity in a salicylic acid-dependent manner. Plant Physiology 152, 1-13.
25. 2+ influx systems by pheromone signaling in Saccharomyces cerevisiae. Genetics 159, 1527-1538.
26. Rehmann H, Wittinghofer A, Bos JL. 2007. Capturing cyclic nucleotides in action: snapshots from crystallographic studies. Nature Reviews Molecular Cell Biology 8, 63-73.
27. Schuurink RC, Shartzer SF, Fath A, Jones RL. 1998. Characterization of a calmodulin-binding transporter from the plasma membrane of barley aleurone. Proceedings of the National Academy of Sciences, USA 95, 1944-1949.
28. Silva H, Yoshioka K, Dooner HK, Klessig DF. 1999. Characterization of a new Arabidopsis mutant exhibiting enhanced disease resistance. Molecular Plant-Microbe Interactions 12, 1053-1063.
29. Talke IN, Blaudez D, Maathuis FJM, Sanders D. 2003. CNGCs: prime targets of plant cyclic nucleotide signaling? Trends in Plant Science 8, 286-293.
30. Thompson JD, Higgins DG, Gibson TJ. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Research 22, 4673-4680.
31. 2+ dependent manner. Plant Molecular Biology 65, 747-761.
32. Wallis JW, Chrebet G, Brodsky G, Rolfe M, Rothstein R. 1989. A hyper-recombination mutation in S. cerevisiae identifies a novel eukaryotic topoisomerase. Cell 58, 409-419.
33. Weber IT, Steitz TA. 1987. Structure of a complex of catabolite gene? activator protein and cyclic AMP refined at 2.5 A resolution. Journal of Molecular Biology 198, 311-326.
34. Yoshioka K, Kachroo P, Tsui F, Sharma SB, Shah J, Klessig DF. 2001. Environmentally-sensitive, SA-dependent defence response in the cpr22 mutant of Arabidopsis. The Plant Journal 26, 447-459.
35. Yoshioka K, Moeder W, Kang HG, Kachroo P, Masmoudi K, Berkowitz G, Klessig DF. 2006. The chimeric Arabidopsis CYCLIC NUCLEOTIDE-GATED ION CHANNEL11/12 activates multiple pathogen resistance responses. The Plant Cell 18, 747-763.
36. Zagotta WN, Siegelbaum SA. 1996. Structure and function of cyclic nucleotide-gated channels. Annual Review of Neuroscience 19, 235-263.
37. Zagotta WN, Olivier NB, Black KD, Young EC, Olson R, Gouaux E. 2003. Structural basis for modulation and agonist specificity of HCN pacemaker channels. Nature 425, 200-205.
38. Zufall F, Firestein S, Shepherd GM. 1994. Cyclic nucleotide-gated ion channels and sensory transduction in olfactory receptor neurons. Annual Review of Biophysics and Biomolecure Structure 23, 577-607.