Some properties of fig latent virus 1, a new member of the family Flexiviridae

Journal of Plant Pathology

Volumn 91, Issue 3, 2009, Pages 555-564

  Gattoni, G ^a   Minafra, A ^b   Castellano, M A ^b   de Stradis, A ^b   Boscia, D ^b   Elbeaino, T ^c   Digiaro, M ^c   Martelli, G P ^a  

^a UNIVERSITY OF BARI   (Italy)

^b INSTITUTE FOR SUSTAINABLE PLANT PROTECTION   (Italy)

^c ISTITUTO AGRONOMICO MEDITERRANEO   (Italy)

Author keywords

Cytopathology; Fig latent virus; Partial genome sequence; Serology; Trichovirus

Indexed keywords

FICUS (ANGIOSPERM); FLEXIVIRIDAE; ORYCTOLAGUS CUNICULUS; TRICHOVIRUS;

EID: 77952863952     PISSN: 11254653     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (33)

1. Adams M.J, Accotto G.P., Agranovsky A.A., Bar-Joseph M., Boscia D., Brunt A.A., Candresse T., Coutts R.H.A, Dolja, V.V., Falk B.W., Foster G.D., Gonsalves D., Jelkmann W., Karasev A.V., Martelli G.P., Mawassi M., Milne R.G., Minafra A., Namba S., Rowhani A., Vetten H.J., Vishnichenko V.K., Wisler C.G., Yoshikawa N., Zaviev S.K., 2005. Family Flexiviridae. In: Fauquet C.M., Mayo M.A., Maniloff J., Desselberger U., Ball L.A. (eds). Virus Taxonomy, 8th Report of ICTV, pp. 1089-1124. Elsevier/Academic Press, London, UK.
2. Altschul S.F., Stephen F., Gish W., Miller W., Myers E.W., Lipman D.J., 1990. Basic local alignment search tool. Journal of Mololecular Biology 215: 403-410.
3. Appiano A., 1982. Cytological observations on leaves of fig infected with fig mosaic. Caryologia 35: 152.
4. Berger P.H., Hunt A.G., Domier L.L., Hellmann G.M., Stram Y., Thornbury D.W., Pirone T.P., 1989. Expression in transgenic plants of a viral gene product that mediates insect transmission of potyviruses. Proceedings of the National Academy of Sciences USA. 86: 8402-8406.
5. Bradfute O.E., Whitmore R.E., Nault R.L., 1970. Ultrastructure of plant leaf tissues infected with mite-borne viral-like pathogens. Proceedings of the Electron Microscope Society of America 28: 179-179.
6. Castellano M.A., Gattoni G., Minafra A., Conti M., Martelli G.P., 2007. Fig mosaic in Mexico and South Africa. Journal of Plant Patholology 89: 441-443.
7. Diener T.O., Schneider I.R., 1968. Virus degradation and nucleic acid release in single-phase phenol systems. Archives of Biochemistry and Biophysics 124: 401-412.
8. Doi Y., 1989. Fig virus S. In: Hull R. Brown, F., Payne C. (eds). Directory and Dictionary of Animal, Bacterial and Plant Viruses, pp. 6. McMillan Reference Books, London, UK.
9. Dolja V.V., Boyko V.P., Agranovsky A.A., Koonin E.V., 1991. Phylogeny of capsid proteins of rod-shaped and filamentous RNA plant viruses: two families with distinct patterns of sequence and probably structure conservation. Virology 184: 79-86.
10. Dolja V.V., Kreuze J.F., Valkonen J.P., 2006. Comparative and functional genomics of closteroviruses. Virus Research 117:38-51.
11. Dovas C.I., Katis N.I., 2003. A spot nested RT-PCR method for the simultaneous detection of members of the Vitivirus and Foveavirus genera in grapevine. Journal of Virological Methods 107:99-106.
12. Elbeaino T., Digiaro M., De Stradis A., Martelli G.P., 2006. Partial characterization of a closterovirus associated with a chlorotic mottling of fig. Journal of Plant Patholology 88: 187-192.
13. Elbeaino T., Digiaro M., De Stradis A., Martelli G.P., 2007. Identification of a second member of the family Closteroviridae in mosaic-diseased figs. Journal of Plant Patholology 89: 119-124.
14. Elbeaino T., Digiaro M., Alabdullah A., De Stradis A., Minafra A., Mielke N., Castellano M.A., Martelli G.P., 2009. A multipartite single-stranded negative-sense RNA virus is the putative agent of fig mosaic disease. Journal of General Virology 90: 1281-1288.
15. Foissac X., Svanella-Dumas L., Dulucq M. J., Candresse T., Gentit P., 2000. Polyvalent detection of fruit tree tricho, capillo and foveaviruses by nested RT-PCR using degenerated and inosine containing primers (PDO RT-PCR). Acta Horticulturae 550: 37-44.
16. Grbelja J., Eric Z., 1983. Isolation of a Potyvirus from Ficus carica L. Acta Botanica Croata 4: 11-14.
17. James D., Jelkmann W., Upton C., 2000. Nucleotide sequence and genome organization of cherry mottle leaf virus and its relationship to members of the Trichovirus genus. Archives of Virology 145: 995-1007.
18. James D., Varga A., Graft H., Rast H., Thompson D., Hayes S., 2006. Molecular characterisation, phylogenetic relationships, and specific detection of Peach mosaic virus. Virology 96: 137-144.
19. Marck, C., 1988. 'DNA Strider': a 'C' program for the fast analysis of DNA and protein sequences on the Apple Macintosh family of computers. Nucleic Acids Research 16: 1829-1836.
20. Martelli, G.P., Russo M., 1984. Use of thin sectioning for the visualization and identification of plant virus. Methods in Virology 8: 143-224.
21. Martelli G.P., Castellano M.A., Lafortezza R., 1993. An ultra-structural study of fig mosaic. Phytopathologia Mediterranea 32: 33-43.
22. Martelli G.P., Adams M.A., Kreuze J.F., Dolja V.V., 2007. Family Flexiviridae: a case study of virions and genome plasticity. Annual Review of Phytopathology 45: 73-100.
23. Milne R.G., 1993. Electron microscopy of in vitro preparations. In: Matthews R.E.F. (ed.). Diagnosis of Plant Virus Diseases, pp. 215-251. CRC Press, Boca Raton, FL, USA.
24. Namba S., 1983. Fig virus S. In: Yora K., Saito, Y., Doi Y., Inoue T., Tomaru K. (eds). Handbook of Plant Viruses pp. 326-327. Asakura Shoten, Tokyo, Japan.
25. Saldarelli P., Minafra A., Walter B., Martelli G.P., 1994. Detection of grapevine leafroll-associated closterovirus III by molecular hybridization. Plant Pathology 43: 91-96.
26. Saldarelli P., Rowhani A., Routh G., Minafra A., Digiaro M., 1999. Use of degenerate primers in a RT-PCR assay for the identification and analysis of some filamentous viruses, with special reference to clostero-and vitiviruses of the grapevine. European Journal of Plant Pathology 104: 945-950.
27. Saldarelli P., Boscia D., De Stradis A., Vovlas C., 2008. A new member of the family Flexiviridae from Phlomis fruticosa. Journal of Plant Pathology 90: 281-286.
28. th International Congress of Plant Pathology, Christchurch 2003: 23.14.
29. Salomon R., Mawassi M., Flaishman M., 2008. Isolation and characterization of a virus from fig leaves exhibiting mosaic symptoms and development of a sensitive detection procedure for this virus. Acta Horticulturae 798: 259-262.
30. Serrano L., Ramon J., Segarra J., Medina V., Achon M.A., Lopez M., Juarez M., 2004. New approach in the identification of the causl agent of Fig mosaic disease. Acta Horticulturae 657: 559-566.
31. Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G., 1997. The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 24: 4876-4882.
32. Valverde R.A., Dodds J.A., Heick J.A., 1986. Double-stranded ribonucleic acid from plants infected with viruses having elongated particles and undivided genomes. Phytopathology 76: 459-465
33. Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D., Pindo M., Fitzgerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D., Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T., Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N., Stefanini M., Chen Y., Segala C., Davenport C., Demattè L., Mraz A., Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T., Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A., Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J., Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P., Gutin A., Van de Peer Y., Salamini F., Viola R., 2007. A high quality draft consensus sequence of the genome of a heterozygous grapevine variety. PLoS ONE 2, e1326.