-
1
-
-
64149101160
-
Quantitative mass spectrometry-based techniques for clinical use: biomarker identification and quantification
-
Simpson K.L., Whetton A.D., Dive C. Quantitative mass spectrometry-based techniques for clinical use: biomarker identification and quantification. J. Chromatogr. B 2009, 877:1240-1249.
-
(2009)
J. Chromatogr. B
, vol.877
, pp. 1240-1249
-
-
Simpson, K.L.1
Whetton, A.D.2
Dive, C.3
-
2
-
-
34748916981
-
Quantitative mass spectrometry in proteomics: a critical review
-
Bantscheff M., Schirle M., Sweetman G., Rick J., Kuster B. Quantitative mass spectrometry in proteomics: a critical review. Anal. Bioanal. Chem. 2007, 389:1017-1031.
-
(2007)
Anal. Bioanal. Chem.
, vol.389
, pp. 1017-1031
-
-
Bantscheff, M.1
Schirle, M.2
Sweetman, G.3
Rick, J.4
Kuster, B.5
-
3
-
-
42449126136
-
Mass spectrometry-based proteomics: a useful tool for biomarker discovery?
-
Gramolini A.O., Peterman S.M., Kislinger T. Mass spectrometry-based proteomics: a useful tool for biomarker discovery?. Clin. Pharmacol. Ther. 2008, 83:758-760.
-
(2008)
Clin. Pharmacol. Ther.
, vol.83
, pp. 758-760
-
-
Gramolini, A.O.1
Peterman, S.M.2
Kislinger, T.3
-
5
-
-
66149149459
-
Analysis of N- and O-linked glycans from glycoproteins using MALDI-TOF mass spectrometry
-
Morelle W., Faid V., Chirat F., Michalski J.C. Analysis of N- and O-linked glycans from glycoproteins using MALDI-TOF mass spectrometry. Methods Mol. Biol. 2009, 534:5-21.
-
(2009)
Methods Mol. Biol.
, vol.534
, pp. 5-21
-
-
Morelle, W.1
Faid, V.2
Chirat, F.3
Michalski, J.C.4
-
6
-
-
0035139370
-
MALDI-TOF-MS analysis of protein and DNA
-
Bonk T., Humeny A. MALDI-TOF-MS analysis of protein and DNA. Neuroscientist 2001, 7:6-12.
-
(2001)
Neuroscientist
, vol.7
, pp. 6-12
-
-
Bonk, T.1
Humeny, A.2
-
7
-
-
58149296564
-
MALDI-TOF MS analysis of lipids from cells, tissues, and body fluids
-
Fuchs B., Schiller J. MALDI-TOF MS analysis of lipids from cells, tissues, and body fluids. Subcell. Biochem. 2008, 49:541-565.
-
(2008)
Subcell. Biochem.
, vol.49
, pp. 541-565
-
-
Fuchs, B.1
Schiller, J.2
-
8
-
-
47249166413
-
Quantitative evaluation of sphingomyelin and glucosylceramide using matrix-assisted laser desorption ionization time-of-flight mass spectrometry with sphingosylphosphorylcholine as an internal standard: practical application to tissues from patients with Niemann-Pick disease types A and C and Gaucher disease
-
Fujiwaki T., Tasaka M., Yamaguchi S. Quantitative evaluation of sphingomyelin and glucosylceramide using matrix-assisted laser desorption ionization time-of-flight mass spectrometry with sphingosylphosphorylcholine as an internal standard: practical application to tissues from patients with Niemann-Pick disease types A and C and Gaucher disease. J. Chromatogr. B 2008, 870:170-176.
-
(2008)
J. Chromatogr. B
, vol.870
, pp. 170-176
-
-
Fujiwaki, T.1
Tasaka, M.2
Yamaguchi, S.3
-
9
-
-
32244433826
-
Quantitative evaluation of sphingolipids using delayed extraction matrix-assisted laser desorption/ionization time-of-flight mass spectrometry with sphingosylphosphorylcholine as an internal standard: practical application to cardiac valves from a patient with Fabry disease
-
Fujiwaki T., Tasaka M., Takahashi N., Kobayashi H., Murakami Y., Shimada T., Yamaguchi S. Quantitative evaluation of sphingolipids using delayed extraction matrix-assisted laser desorption/ionization time-of-flight mass spectrometry with sphingosylphosphorylcholine as an internal standard: practical application to cardiac valves from a patient with Fabry disease. J. Chromatogr. B 2006, 832:97-102.
-
(2006)
J. Chromatogr. B
, vol.832
, pp. 97-102
-
-
Fujiwaki, T.1
Tasaka, M.2
Takahashi, N.3
Kobayashi, H.4
Murakami, Y.5
Shimada, T.6
Yamaguchi, S.7
-
10
-
-
19944432197
-
Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents
-
Ross P.L., Huang Y.N., Marchese J.N., Williamson B., Parker K., Hattan S., Khainovski N., Pillai S., Dey S., Daniels S., Purkayastha S., Juhasz P., Martin S., Bartlet-Jones M., He F., Jacobson A., Pappin D.J. Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol. Cell. Proteomics 2004, 3:1154-1169.
-
(2004)
Mol. Cell. Proteomics
, vol.3
, pp. 1154-1169
-
-
Ross, P.L.1
Huang, Y.N.2
Marchese, J.N.3
Williamson, B.4
Parker, K.5
Hattan, S.6
Khainovski, N.7
Pillai, S.8
Dey, S.9
Daniels, S.10
Purkayastha, S.11
Juhasz, P.12
Martin, S.13
Bartlet-Jones, M.14
He, F.15
Jacobson, A.16
Pappin, D.J.17
-
11
-
-
24944440037
-
Quantitative proteomic analysis using isobaric protein tags enables rapid comparison of changes in transcript and protein levels in transformed cells
-
Unwin R.D., Pierce A., Watson R.B., Sternberg D.W., Whetton A.D. Quantitative proteomic analysis using isobaric protein tags enables rapid comparison of changes in transcript and protein levels in transformed cells. Mol. Cell. Proteomics 2005, 4:924-935.
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 924-935
-
-
Unwin, R.D.1
Pierce, A.2
Watson, R.B.3
Sternberg, D.W.4
Whetton, A.D.5
-
12
-
-
27744450286
-
I-Tracker: for quantitative proteomics using iTRAQ
-
Shadforth I.P., Dunkley T.P., Lilley K.S., Bessant C. I-Tracker: for quantitative proteomics using iTRAQ. BMC Genomics 2005, 6:145.
-
(2005)
BMC Genomics
, vol.6
, pp. 145
-
-
Shadforth, I.P.1
Dunkley, T.P.2
Lilley, K.S.3
Bessant, C.4
-
13
-
-
0036583926
-
Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
-
Ong S.E., Blagoev B., Kratchmarova I., Kristensen D.B., Steen H., Pandey A., Mann M. Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol. Cell. Proteomics 2002, 1:376-386.
-
(2002)
Mol. Cell. Proteomics
, vol.1
, pp. 376-386
-
-
Ong, S.E.1
Blagoev, B.2
Kratchmarova, I.3
Kristensen, D.B.4
Steen, H.5
Pandey, A.6
Mann, M.7
-
14
-
-
0032875697
-
Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
-
Gygi S.P., Rist B., Gerber S.A., Turecek F., Gelb M.H., Aebersold R. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat. Biotechnol. 1999, 17:994-999.
-
(1999)
Nat. Biotechnol.
, vol.17
, pp. 994-999
-
-
Gygi, S.P.1
Rist, B.2
Gerber, S.A.3
Turecek, F.4
Gelb, M.H.5
Aebersold, R.6
-
15
-
-
0037795741
-
Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS
-
Gerber S.A., Rush J., Stemman O., Kirschner M.W., Gygi S.P. Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS. Proc. Natl. Acad. Sci. USA 2003, 100:6940-6945.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 6940-6945
-
-
Gerber, S.A.1
Rush, J.2
Stemman, O.3
Kirschner, M.W.4
Gygi, S.P.5
-
16
-
-
63849165806
-
Proteomics/peptidomics tools to find CSF biomarkers for neurodegenerative diseases
-
Westman-Brinkmalm A., Ruetschi U., Portelius E., Andreasson U., Brinkmalm G., Karlsson G., Hansson S., Zetterberg H., Blennow K. Proteomics/peptidomics tools to find CSF biomarkers for neurodegenerative diseases. Front. Biosci. 2009, 14:1793-1806.
-
(2009)
Front. Biosci.
, vol.14
, pp. 1793-1806
-
-
Westman-Brinkmalm, A.1
Ruetschi, U.2
Portelius, E.3
Andreasson, U.4
Brinkmalm, G.5
Karlsson, G.6
Hansson, S.7
Zetterberg, H.8
Blennow, K.9
-
17
-
-
34248660806
-
Cerebrospinal fluid analysis in multiple sclerosis
-
Luque F.A., Jaffe S.L. Cerebrospinal fluid analysis in multiple sclerosis. Int. Rev. Neurobiol. 2007, 79:341-356.
-
(2007)
Int. Rev. Neurobiol.
, vol.79
, pp. 341-356
-
-
Luque, F.A.1
Jaffe, S.L.2
-
18
-
-
36049016146
-
CSF biomarkers for improved prognostic accuracy in acute CNS disease
-
Petzold A. CSF biomarkers for improved prognostic accuracy in acute CNS disease. Neurol. Res. 2007, 29:691-708.
-
(2007)
Neurol. Res.
, vol.29
, pp. 691-708
-
-
Petzold, A.1
-
19
-
-
38649136201
-
Integrated analysis of the cerebrospinal fluid peptidome and proteome
-
Zougman A., Pilch B., Podtelejnikov A., Kiehntopf M., Schnabel C., Kumar C., Mann M. Integrated analysis of the cerebrospinal fluid peptidome and proteome. J. Proteome Res. 2008, 7:386-399.
-
(2008)
J. Proteome Res.
, vol.7
, pp. 386-399
-
-
Zougman, A.1
Pilch, B.2
Podtelejnikov, A.3
Kiehntopf, M.4
Schnabel, C.5
Kumar, C.6
Mann, M.7
-
20
-
-
14744276328
-
Top-down identification of endogenous peptides up to 9kDa in cerebrospinal fluid and brain tissue by nanoelectrospray quadrupole time-of-flight tandem mass spectrometry
-
Mohring T., Kellmann M., Jurgens M., Schrader M. Top-down identification of endogenous peptides up to 9kDa in cerebrospinal fluid and brain tissue by nanoelectrospray quadrupole time-of-flight tandem mass spectrometry. J. Mass Spectrom. 2005, 40:214-226.
-
(2005)
J. Mass Spectrom.
, vol.40
, pp. 214-226
-
-
Mohring, T.1
Kellmann, M.2
Jurgens, M.3
Schrader, M.4
-
22
-
-
33646755391
-
Expression of thymosin beta in the rat brain following transient global ischemia
-
Kim Y., Kim E.H., Hong S., Rhyu I.J., Choe J., Sun W., Kim H. Expression of thymosin beta in the rat brain following transient global ischemia. Brain Res. 2006, 1085:177-182.
-
(2006)
Brain Res.
, vol.1085
, pp. 177-182
-
-
Kim, Y.1
Kim, E.H.2
Hong, S.3
Rhyu, I.J.4
Choe, J.5
Sun, W.6
Kim, H.7
-
23
-
-
30744472648
-
Local synthesis of actin-binding protein β-thymosin regulates neurite outgrowth
-
van Kesteren R.E., Carter C., Dissel H.M., van Minnen J., Gouwenberg Y., Syed N.I., Spencer G.E., Smit A.B. Local synthesis of actin-binding protein β-thymosin regulates neurite outgrowth. J. Neurosci. 2006, 26:152-157.
-
(2006)
J. Neurosci.
, vol.26
, pp. 152-157
-
-
van Kesteren, R.E.1
Carter, C.2
Dissel, H.M.3
van Minnen, J.4
Gouwenberg, Y.5
Syed, N.I.6
Spencer, G.E.7
Smit, A.B.8
-
24
-
-
33846243239
-
4 induces adult epicardial progenitor mobilization and neovascularization
-
4 induces adult epicardial progenitor mobilization and neovascularization. Nature 2007, 445:177-182.
-
(2007)
Nature
, vol.445
, pp. 177-182
-
-
Smart, N.1
Risebro, C.A.2
Melville, A.A.3
Moses, K.4
Schwartz, R.J.5
Chien, K.R.6
Riley, P.R.7
-
25
-
-
67649418024
-
4 is differentially expressed in the cerebrospinal fluid of Creutzfeldt-Jakob disease patients: a MALDI-TOF MS protein profiling study
-
4 is differentially expressed in the cerebrospinal fluid of Creutzfeldt-Jakob disease patients: a MALDI-TOF MS protein profiling study. Proteomics Clin. Appl. 2009, 3:574-583.
-
(2009)
Proteomics Clin. Appl.
, vol.3
, pp. 574-583
-
-
Qualtieri, A.1
Urso, E.2
Le Pera, M.3
Bossio, S.4
Bernaudo, F.5
Ferraro, T.6
Crescibene, L.7
Aguglia, U.8
Quattrone, A.9
-
26
-
-
13244299091
-
The impact of blood contamination on the proteome of cerebrospinal fluid
-
You J.S., Gelfanova V., Knierman M.D., Witzmann F.A., Wang M., Hale J.E. The impact of blood contamination on the proteome of cerebrospinal fluid. Proteomics 2005, 5:290-296.
-
(2005)
Proteomics
, vol.5
, pp. 290-296
-
-
You, J.S.1
Gelfanova, V.2
Knierman, M.D.3
Witzmann, F.A.4
Wang, M.5
Hale, J.E.6
-
27
-
-
0028868280
-
Application of the fast-evaporation sample preparation method for improving quantification of angiotensin II by matrix-assisted laser desorption/ionization
-
Nicola A.J., Gusev A.I., Proctor A., Jackson E.K., Hercules D.M. Application of the fast-evaporation sample preparation method for improving quantification of angiotensin II by matrix-assisted laser desorption/ionization. Rapid Commun. Mass Spectrom. 1995, 9:1164-1171.
-
(1995)
Rapid Commun. Mass Spectrom.
, vol.9
, pp. 1164-1171
-
-
Nicola, A.J.1
Gusev, A.I.2
Proctor, A.3
Jackson, E.K.4
Hercules, D.M.5
-
28
-
-
54949144651
-
SELDI-TOF-MS determination of hepcidin in clinical samples using stable isotope labelled hepcidin as an internal standard
-
Ward D.G., Roberts K., Stonelake P., Goon P., Zampronio C.G., Martin A., Johnson P.J., Iqbal T., Tselepis C. SELDI-TOF-MS determination of hepcidin in clinical samples using stable isotope labelled hepcidin as an internal standard. Proteome Sci. 2008, 6:28.
-
(2008)
Proteome Sci.
, vol.6
, pp. 28
-
-
Ward, D.G.1
Roberts, K.2
Stonelake, P.3
Goon, P.4
Zampronio, C.G.5
Martin, A.6
Johnson, P.J.7
Iqbal, T.8
Tselepis, C.9
-
29
-
-
28844432511
-
Proteomic profiling of cerebrospinal fluid identifies biomarkers for amyotrophic lateral sclerosis
-
Ranganathan S., Williams E., Ganchev P., Gopalakrishnan V., Lacomis D., Urbinelli L., Newhall K., Cudkowicz M.E., Brown R.H., Bowser R. Proteomic profiling of cerebrospinal fluid identifies biomarkers for amyotrophic lateral sclerosis. J. Neurochem. 2005, 95:1461-1471.
-
(2005)
J. Neurochem.
, vol.95
, pp. 1461-1471
-
-
Ranganathan, S.1
Williams, E.2
Ganchev, P.3
Gopalakrishnan, V.4
Lacomis, D.5
Urbinelli, L.6
Newhall, K.7
Cudkowicz, M.E.8
Brown, R.H.9
Bowser, R.10
-
30
-
-
33846027431
-
Detection of pre-neoplastic and neoplastic prostate disease by MALDI profiling of urine
-
M'Koma A.E., Blum D.L., Norris J.L., Koyama T., Billheimer D., Motley S., Ghiassi M., Ferdowsi N., Bhowmick I., Chang S.S., Fowke J.H., Caprioli R.M., Bhowmick N.A. Detection of pre-neoplastic and neoplastic prostate disease by MALDI profiling of urine. Biochem. Biophys. Res. Commun. 2007, 353:829-834.
-
(2007)
Biochem. Biophys. Res. Commun.
, vol.353
, pp. 829-834
-
-
M'Koma, A.E.1
Blum, D.L.2
Norris, J.L.3
Koyama, T.4
Billheimer, D.5
Motley, S.6
Ghiassi, M.7
Ferdowsi, N.8
Bhowmick, I.9
Chang, S.S.10
Fowke, J.H.11
Caprioli, R.M.12
Bhowmick, N.A.13
-
31
-
-
40549087581
-
MALDI/SELDI protein profiling of serum for the identification of cancer biomarkers
-
Cazares L.H., Diaz J.I., Drake R.R., Semmes O.J. MALDI/SELDI protein profiling of serum for the identification of cancer biomarkers. Methods Mol. Biol. 2008, 428:125-140.
-
(2008)
Methods Mol. Biol.
, vol.428
, pp. 125-140
-
-
Cazares, L.H.1
Diaz, J.I.2
Drake, R.R.3
Semmes, O.J.4
-
32
-
-
60549112041
-
10
-
10. J. Sep. Sci. 2009, 32:57-63.
-
(2009)
J. Sep. Sci.
, vol.32
, pp. 57-63
-
-
Inzitari, R.1
Cabras, T.2
Pisano, E.3
Fanali, C.4
Manconi, B.5
Scarano, E.6
Fiorita, A.7
Paludetti, G.8
Manni, A.9
Nemolato, S.10
Faa, G.11
Castagnola, M.12
Messana, I.13
-
33
-
-
33750594230
-
Chemistry meets proteomics: the use of chemical tagging reactions for MS-based proteomics
-
Leitner A., Lindner W. Chemistry meets proteomics: the use of chemical tagging reactions for MS-based proteomics. Proteomics 2006, 6:5418-5434.
-
(2006)
Proteomics
, vol.6
, pp. 5418-5434
-
-
Leitner, A.1
Lindner, W.2
-
34
-
-
33646745745
-
Assessing the properties of internal standards for quantitative matrix-assisted laser desorption/ionization mass spectrometry of small molecules
-
Sleno L., Volmer D.A. Assessing the properties of internal standards for quantitative matrix-assisted laser desorption/ionization mass spectrometry of small molecules. Rapid Commun. Mass Spectrom. 2006, 20:1517-1524.
-
(2006)
Rapid Commun. Mass Spectrom.
, vol.20
, pp. 1517-1524
-
-
Sleno, L.1
Volmer, D.A.2
|