-
1
-
-
0002335569
-
Bacterial production and biomass in the oceans
-
D. L. Kirchman (Ed.), Wiley-Liss Inc., Wilmington, DE
-
Ducklow H (2000) Bacterial production and biomass in the oceans. In: Kirchman DL (ed) Microbial ecology of the oceans. Wiley-Liss Inc., Wilmington, DE, pp 85-121.
-
(2000)
Microbial Ecology of the Oceans
, pp. 85-121
-
-
Ducklow, H.1
-
2
-
-
21844448635
-
Respiration and its measurement in surface marine waters
-
P. Giorgiodel and W. PlB (Eds.), New York: Oxford University Press
-
Robinson C, PlB W (2005) Respiration and its measurement in surface marine waters. In: del Giorgio P, PlB W (eds) Respiration in aquatic ecosystems. Oxford University Press, New York, pp 147-180.
-
(2005)
Respiration in Aquatic Ecosystems
, pp. 147-180
-
-
Robinson, C.1
Plb, W.2
-
3
-
-
66249117185
-
Resource control of bacterial dynamics in the sea
-
D. L. Kirchman (Ed.), New Jersey: John Wiley & Sons
-
Church MJ (2008) Resource control of bacterial dynamics in the sea. In: Kirchman DL (ed) Microbial ecology of the oceans. John Wiley & Sons, New Jersey, pp 335-382.
-
(2008)
Microbial Ecology of the Oceans
, pp. 335-382
-
-
Church, M.J.1
-
4
-
-
84891283485
-
Bacterial and archaeal community structure and its patterns
-
D. L. Kirchman (Ed.), New Jersey: John Wiley and Sons
-
Fuhrman JA, Hagstroem A (2008) Bacterial and archaeal community structure and its patterns. In: Kirchman DL (ed) Microbial ecology of the oceans. John Wiley and Sons, New Jersey, pp 45-90.
-
(2008)
Microbial Ecology of the Oceans
, pp. 45-90
-
-
Fuhrman, J.A.1
Hagstroem, A.2
-
5
-
-
0034068899
-
Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low-and high-molecular-weight dissolved organic matter
-
Cottrell MT, Kirchman DL (2000) Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low-and high-molecular-weight dissolved organic matter. Appl Environ Microbiol 66: 1692-1697.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 1692-1697
-
-
Cottrell, M.T.1
Kirchman, D.L.2
-
6
-
-
43949120140
-
Diversity, ecology and genomics of the Roseobacter clade: A short overview
-
Brinkhoff T, Giebel H-A, Simon M (2008) Diversity, ecology and genomics of the Roseobacter clade: a short overview. Arch Microbiol 189: 531-539.
-
(2008)
Arch Microbiol
, vol.189
, pp. 531-539
-
-
Brinkhoff, T.1
Giebel, H.-A.2
Simon, M.3
-
7
-
-
38949113807
-
Bacterial carbon processing by generalist species in the coastal ocean
-
Mou X, Sun S, Edwards RA, Hodson RE, Moran MA (2008) Bacterial carbon processing by generalist species in the coastal ocean. Nature 451: 708-711.
-
(2008)
Nature
, vol.451
, pp. 708-711
-
-
Mou, X.1
Sun, S.2
Edwards, R.A.3
Hodson, R.E.4
Moran, M.A.5
-
8
-
-
0344721475
-
How stable is stable? Function versus community composition
-
Fernandez A, Huang S, Seston S, Xing J, Hickey R, Criddle C, Tiedje J (1999) How stable is stable? Function versus community composition. Appl Environ Microbiol 65: 3697-3704.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 3697-3704
-
-
Fernandez, A.1
Huang, S.2
Seston, S.3
Xing, J.4
Hickey, R.5
Criddle, C.6
Tiedje, J.7
-
9
-
-
33644850614
-
Structure and function of bacterial communities emerging from different sources under identical conditions
-
Langenheder S, Lindstroem ES, Tranvik LJ (2006) Structure and function of bacterial communities emerging from different sources under identical conditions. Appl Environ Microbiol 72: 212-220.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 212-220
-
-
Langenheder, S.1
Lindstroem, E.S.2
Tranvik, L.J.3
-
10
-
-
43049158161
-
Factors controlling the year-round variability in carbon flux through bacteria in a coastal marine system
-
Alonso-Saez L, Vazquez-Dominguez E, Cardelus C, Pinhassi J, Sala MM, Lekunberri I, Balague V, Vila-Costa M, Unrein F, Massana R, Simo R, Gasol JM (2008) Factors controlling the year-round variability in carbon flux through bacteria in a coastal marine system. Ecosystems 11: 397-409.
-
(2008)
Ecosystems
, vol.11
, pp. 397-409
-
-
Alonso-Saez, L.1
Vazquez-Dominguez, E.2
Cardelus, C.3
Pinhassi, J.4
Sala, M.M.5
Lekunberri, I.6
Balague, V.7
Vila-Costa, M.8
Unrein, F.9
Massana, R.10
Simo, R.11
Gasol, J.M.12
-
11
-
-
34948861680
-
Links between bacterial production, amino-acid utilization and community composition in productive lakes
-
Bertilsson S, Eiler A, Nordqvist A, Jorgensen NOG (2007) Links between bacterial production, amino-acid utilization and community composition in productive lakes. ISME J 1: 532-544.
-
(2007)
ISME J
, vol.1
, pp. 532-544
-
-
Bertilsson, S.1
Eiler, A.2
Nordqvist, A.3
Jorgensen, N.O.G.4
-
12
-
-
18444373562
-
Relationship between bacterioplankton richness, respiration, and production in the Southern North Sea
-
Reinthaler T, Winter C, Herndl GJ (2005) Relationship between bacterioplankton richness, respiration, and production in the Southern North Sea. Appl Environ Microbiol 71: 2260-2266.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 2260-2266
-
-
Reinthaler, T.1
Winter, C.2
Herndl, G.J.3
-
13
-
-
33748353399
-
Annually reoccurring bacterial communities are predictable from ocean conditions
-
Fuhrman JA, Hewson I, Schwalbach MS, Steele JA, Brown MV, Naeem S (2006) Annually reoccurring bacterial communities are predictable from ocean conditions. PNAS 103: 13104-13109.
-
(2006)
Pnas
, vol.103
, pp. 13104-13109
-
-
Fuhrman, J.A.1
Hewson, I.2
Schwalbach, M.S.3
Steele, J.A.4
Brown, M.V.5
Naeem, S.6
-
14
-
-
40949147514
-
Linkages between bacterioplankton community composition, heterotrophic carbon cycling and environmental conditions in a highly dynamic coastal ecosystem
-
Teira E, Gasol JM, Aranguren-Gassis M, Fernandez A, Gonzalez J, Lekunberri I, Alvarez-Salgado XA (2008) Linkages between bacterioplankton community composition, heterotrophic carbon cycling and environmental conditions in a highly dynamic coastal ecosystem. Environ Microbiol 10: 906-917.
-
(2008)
Environ Microbiol
, vol.10
, pp. 906-917
-
-
Teira, E.1
Gasol, J.M.2
Aranguren-Gassis, M.3
Fernandez, A.4
Gonzalez, J.5
Lekunberri, I.6
Alvarez-Salgado, X.A.7
-
15
-
-
84891283567
-
Physiological structure and single-cell activity in marine bacterioplankton
-
D. L. Kirchman (Ed.), New Jersey: John Wiley & Sons
-
del Giorgio PA, Gasol JM (2008) Physiological structure and single-cell activity in marine bacterioplankton. In: Kirchman DL (ed) Microbial ecology of the oceans. John Wiley & Sons, New Jersey, pp 243-285.
-
(2008)
Microbial Ecology of the Oceans
, pp. 243-285
-
-
del Giorgio, P.A.1
Gasol, J.M.2
-
17
-
-
0027289343
-
Comparison of nucleic acid hybridization and fluorometry for measurement of the relationship between RNA/DNA ratio and growth rate in a marine bacterium
-
Kerkhof L, Ward BB (1993) Comparison of nucleic acid hybridization and fluorometry for measurement of the relationship between RNA/DNA ratio and growth rate in a marine bacterium. Appl Environ Microbiol 59: 1303-1309.
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 1303-1309
-
-
Kerkhof, L.1
Ward, B.B.2
-
18
-
-
0027264175
-
Use of rRNA fluorescence in situ hybridization for measuring the activity of single cells in young and established biofilms
-
Poulsen LK, Ballard G, Stahl DA (1993) Use of rRNA fluorescence in situ hybridization for measuring the activity of single cells in young and established biofilms. Appl Environ Microbiol 59: 1354-1360.
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 1354-1360
-
-
Poulsen, L.K.1
Ballard, G.2
Stahl, D.A.3
-
19
-
-
0028082720
-
Single-cell RNA content of natural marine planktonic bacteria measured by hybridization with multiple 16S rRNA-targeted fluorescent probes
-
Lee SH, Kemp PF (1994) Single-cell RNA content of natural marine planktonic bacteria measured by hybridization with multiple 16S rRNA-targeted fluorescent probes. Limnol Oceanogr 39: 869-879.
-
(1994)
Limnol Oceanogr
, vol.39
, pp. 869-879
-
-
Lee, S.H.1
Kemp, P.F.2
-
20
-
-
0026737761
-
Ribosomes exist in large excess over the apparent demand for protein synthesis during carbon starvation in marine Vibrio sp. strain CCUG 15956
-
Flaerdh K, Cohen PS, Kjielleberg S (1992) Ribosomes exist in large excess over the apparent demand for protein synthesis during carbon starvation in marine Vibrio sp. strain CCUG 15956. J Bacteriol 174: 6780-6788.
-
(1992)
J Bacteriol
, vol.174
, pp. 6780-6788
-
-
Flaerdh, K.1
Cohen, P.S.2
Kjielleberg, S.3
-
21
-
-
0031734090
-
Implications of rRNA operon copy number and ribosome content in the marine oligotrophic ultramicrobacterium Spingomonas sp. strain RB2256
-
Fegatella F, Lim J, Kjelleberg S, Cavicchioli R (1998) Implications of rRNA operon copy number and ribosome content in the marine oligotrophic ultramicrobacterium Spingomonas sp. strain RB2256. Appl Environ Microbiol 64: 443-4438.
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 443-4438
-
-
Fegatella, F.1
Lim, J.2
Kjelleberg, S.3
Cavicchioli, R.4
-
22
-
-
33750936033
-
Study of bacterial communities in Antarctic coastal waters by a combination of 16S rRNA and 16S rDNA sequencing
-
Gentile G, d'Auria G, Smedile F, Azzaro M, Domenico MD, Yakimov MM (2006) Study of bacterial communities in Antarctic coastal waters by a combination of 16S rRNA and 16S rDNA sequencing. Environ Microbiol 8: 2150-2161.
-
(2006)
Environ Microbiol
, vol.8
, pp. 2150-2161
-
-
Gentile, G.1
D'Auria, G.2
Smedile, F.3
Azzaro, M.4
Domenico, M.D.5
Yakimov, M.M.6
-
23
-
-
38549100034
-
Major differences of bacterial diversity and activity inside and outside of a natural iron-fertilized phytoplankton bloom in the Southern Ocean
-
West N, Obernosterer I, Zemb O, Lebaron P (2008) Major differences of bacterial diversity and activity inside and outside of a natural iron-fertilized phytoplankton bloom in the Southern Ocean. Environ Microbiol 10: 738-756.
-
(2008)
Environ Microbiol
, vol.10
, pp. 738-756
-
-
West, N.1
Obernosterer, I.2
Zemb, O.3
Lebaron, P.4
-
24
-
-
61949349707
-
Annual patterns of presence and activity of marine bacteria monitored by 16S rDNA-16S rRNA fingerprints in the coastal NW Mediterranean Sea
-
Lami R, Ghiglione J-F, Desdevises Y, West NJ, Lebaron P (2009) Annual patterns of presence and activity of marine bacteria monitored by 16S rDNA-16S rRNA fingerprints in the coastal NW Mediterranean Sea. Aquat Microb Ecol 54: 199-210.
-
(2009)
Aquat Microb Ecol
, vol.54
, pp. 199-210
-
-
Lami, R.1
Ghiglione, J.-F.2
Desdevises, Y.3
West, N.J.4
Lebaron, P.5
-
25
-
-
10744227399
-
The effects of a strong winter storm on physical and biological variables at a shelf site in the Mediterranean
-
Grémare A, Amouroux JM, Cauwet G, Charles F, Courties C, De Bovée F, Dinet A, Devenon JL, Durrieu DeMadron X, Ferre B, Fraunie P, Joux F, Lantoine F, Lebaron P, Naudin JJ, Palanques A, Pujo-Pay M, Zudaire L (2003) The effects of a strong winter storm on physical and biological variables at a shelf site in the Mediterranean. Oceanol Acta 26: 407-419.
-
(2003)
Oceanol Acta
, vol.26
, pp. 407-419
-
-
Grémare, A.1
Amouroux, J.M.2
Cauwet, G.3
Charles, F.4
Courties, C.5
de Bovée, F.6
Dinet, A.7
Devenon, J.L.8
Durrieu Demadron, X.9
Ferre, B.10
Fraunie, P.11
Joux, F.12
Lantoine, F.13
Lebaron, P.14
Naudin, J.J.15
Palanques, A.16
Pujo-Pay, M.17
Zudaire, L.18
-
26
-
-
84891315633
-
Heterotrophic bacterial respiration
-
D. Kirchman (Ed.), New Jersey: Wiley-Blackwell
-
Robinson C (2008) Heterotrophic bacterial respiration. In: Kirchman D (ed) Microbial ecology of the oceans. Wiley-Blackwell, New Jersey, pp 299-327.
-
(2008)
Microbial Ecology of the Oceans
, pp. 299-327
-
-
Robinson, C.1
-
27
-
-
0001003553
-
Protein content and protein synthesis rates of planktonic marine bacteria
-
Simon M, Azam F (1989) Protein content and protein synthesis rates of planktonic marine bacteria. Mar Ecol Prog Ser 51: 201-213.
-
(1989)
Mar Ecol Prog Ser
, vol.51
, pp. 201-213
-
-
Simon, M.1
Azam, F.2
-
28
-
-
0035318548
-
Does the high nucleic acid content of individual bacterial cells allow us to discriminate between active cells and inactive cells in aquatic systems?
-
Lebaron P, Servais P, Agogue H, Courties C, Joux F (2001) Does the high nucleic acid content of individual bacterial cells allow us to discriminate between active cells and inactive cells in aquatic systems? Appl Environ Microbiol 67: 1775-1782.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 1775-1782
-
-
Lebaron, P.1
Servais, P.2
Agogue, H.3
Courties, C.4
Joux, F.5
-
29
-
-
0031664572
-
Direct determination of carbon and nitrogen contents of natural bacterial assemblages in marine environments
-
Fukuda R, Ogawa H, Nagata T, Koike I (1998) Direct determination of carbon and nitrogen contents of natural bacterial assemblages in marine environments. Appl Environ Microbiol 64: 3352-3358.
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 3352-3358
-
-
Fukuda, R.1
Ogawa, H.2
Nagata, T.3
Koike, I.4
-
30
-
-
0019513663
-
Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli
-
Brosius J, Dull T, Sleeter DD, Noller HF (1981) Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J Mol Biol 148: 107-127.
-
(1981)
J Mol Biol
, vol.148
, pp. 107-127
-
-
Brosius, J.1
Dull, T.2
Sleeter, D.D.3
Noller, H.F.4
-
31
-
-
27844571900
-
Spatial and temporal scales of variation in the bacterioplankton community structure in the NW Mediterranean Sea
-
Ghiglione J-F, Larcher M, Lebaron P (2005) Spatial and temporal scales of variation in the bacterioplankton community structure in the NW Mediterranean Sea. Aquat Microb Ecol 40: 229-240.
-
(2005)
Aquat Microb Ecol
, vol.40
, pp. 229-240
-
-
Ghiglione, J.-F.1
Larcher, M.2
Lebaron, P.3
-
32
-
-
3242884054
-
Fine-scale phylogenetic architecture of a complex bacterial community
-
Acinas SG, Klepac-Ceraj V, Hunt DE, Pharino C, Ceraj I, Distel DL, Polz MF (2004) Fine-scale phylogenetic architecture of a complex bacterial community. Natue 430: 551-554.
-
(2004)
Natue
, vol.430
, pp. 551-554
-
-
Acinas, S.G.1
Klepac-Ceraj, V.2
Hunt, D.E.3
Pharino, C.4
Ceraj, I.5
Distel, D.L.6
Polz, M.F.7
-
33
-
-
28944440027
-
Marine bacterial microdiversity as revealed by internal transcribed spacer analysis
-
Brown MV, Fuhrman JA (2005) Marine bacterial microdiversity as revealed by internal transcribed spacer analysis. Aquat Microb Ecol 41: 15-23.
-
(2005)
Aquat Microb Ecol
, vol.41
, pp. 15-23
-
-
Brown, M.V.1
Fuhrman, J.A.2
-
34
-
-
0037435042
-
Seasonal changes in the taxonomic composition of bacterioplankton in a coastal oligotrophic system
-
Schauer M, Balague V, Pedros-Alio C, Massana R (2003) Seasonal changes in the taxonomic composition of bacterioplankton in a coastal oligotrophic system. Aquat Microb Ecol 31: 163-174.
-
(2003)
Aquat Microb Ecol
, vol.31
, pp. 163-174
-
-
Schauer, M.1
Balague, V.2
Pedros-Alio, C.3
Massana, R.4
-
35
-
-
33947245554
-
Seasonality in bacterial diversity in north-west Mediterranean coastal waters: Assessment through clone libraries, fingerprinting and FISH
-
Alonso-Saez L, Balaqué V, Sa EL, Sanchez O, Gonzalez JM, Pinhassi J, Massana R, Pernthaler J, Pedros-Alio C, Gasol JM (2007) Seasonality in bacterial diversity in north-west Mediterranean coastal waters: assessment through clone libraries, fingerprinting and FISH. FEMS Microbiol Ecol 60: 98-112.
-
(2007)
FEMS Microbiol Ecol
, vol.60
, pp. 98-112
-
-
Alonso-Saez, L.1
Balaqué, V.2
Sa, E.L.3
Sanchez, O.4
Gonzalez, J.M.5
Pinhassi, J.6
Massana, R.7
Pernthaler, J.8
Pedros-Alio, C.9
Gasol, J.M.10
-
36
-
-
25144481245
-
Temporal and spatial response of bacterioplankton lineages to annual convective overturn at the Bermuda Atlantic Time-series Study site
-
Morris RM, Vergin KL, Cho J-C, Rappé MS, Carlson CA, Giovannoni SJ (2005) Temporal and spatial response of bacterioplankton lineages to annual convective overturn at the Bermuda Atlantic Time-series Study site. Limnol Oceanogr 50: 1687-1696.
-
(2005)
Limnol Oceanogr
, vol.50
, pp. 1687-1696
-
-
Morris, R.M.1
Vergin, K.L.2
Cho, J.-C.3
Rappé, M.S.4
Carlson, C.A.5
Giovannoni, S.J.6
-
37
-
-
0034530892
-
Microbial community dynamics in Mediterranean nutrient-enriched seawater mesocosms: Changes in the genetic diversity of bacterial populations
-
Schäfer H, Bernard L, Courties C, Lebaron P, Servais P, Pukall R, Stackebrandt E, Trousselier M, Guindulain T, Vives-Rego J, Muyzer G (2001) Microbial community dynamics in Mediterranean nutrient-enriched seawater mesocosms: changes in the genetic diversity of bacterial populations. FEMS Microbiol Ecol 34: 243-253.
-
(2001)
FEMS Microbiol Ecol
, vol.34
, pp. 243-253
-
-
Schäfer, H.1
Bernard, L.2
Courties, C.3
Lebaron, P.4
Servais, P.5
Pukall, R.6
Stackebrandt, E.7
Trousselier, M.8
Guindulain, T.9
Vives-Rego, J.10
Muyzer, G.11
-
38
-
-
0037184539
-
The effect of nutrient amendments on bacterioplankton production, community structure, and DOC utilization in the northwestern Sargasso Sea
-
Carlson CA, Giovannoni SJ, Hansell DA, Goldberg SJ, Parsons R, Otero MP, Vergin K, Wheeler BR (2002) The effect of nutrient amendments on bacterioplankton production, community structure, and DOC utilization in the northwestern Sargasso Sea. Aquat Microb Ecol 30: 19-36.
-
(2002)
Aquat Microb Ecol
, vol.30
, pp. 19-36
-
-
Carlson, C.A.1
Giovannoni, S.J.2
Hansell, D.A.3
Goldberg, S.J.4
Parsons, R.5
Otero, M.P.6
Vergin, K.7
Wheeler, B.R.8
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