-
1
-
-
53349147033
-
Eukaryotic initiation factor 6 is rate-limiting in translation, growth and transformation
-
Gandin V., Miluzio A., Barbieri A.M., Beugnet A., Kiyokawa H., Marchisio P.C., Biffom S. Eukaryotic initiation factor 6 is rate-limiting in translation, growth and transformation. Nature 2008, 455:684-688.
-
(2008)
Nature
, vol.455
, pp. 684-688
-
-
Gandin, V.1
Miluzio, A.2
Barbieri, A.M.3
Beugnet, A.4
Kiyokawa, H.5
Marchisio, P.C.6
Biffom, S.7
-
3
-
-
0033509092
-
Protein trans-acting factors involved in ribosome biogenesis in Saccharomyces cerevisiae
-
Kressler D., Linder P., de la Cruz J. Protein trans-acting factors involved in ribosome biogenesis in Saccharomyces cerevisiae. Mol. Cell. Biol. 1999, 19:7897-7912.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 7897-7912
-
-
Kressler, D.1
Linder, P.2
de la Cruz, J.3
-
4
-
-
0033367325
-
Ribosome synthesis in Saccharomyces cerevisiae
-
Venema J., Tollervey D. Ribosome synthesis in Saccharomyces cerevisiae. Annu. Rev. Genet. 1999, 33:261-311.
-
(1999)
Annu. Rev. Genet.
, vol.33
, pp. 261-311
-
-
Venema, J.1
Tollervey, D.2
-
5
-
-
0034622939
-
Ribosomal RNA maturation in Schizosaccharomyces pombe is dependent on a large ribonucleoprotein complex of the internal transcribed spacer 1
-
Lalev A.I., Abeyrathne P.D., Nazar R.N. Ribosomal RNA maturation in Schizosaccharomyces pombe is dependent on a large ribonucleoprotein complex of the internal transcribed spacer 1. J. Mol. Biol. 2000, 302:65-77.
-
(2000)
J. Mol. Biol.
, vol.302
, pp. 65-77
-
-
Lalev, A.I.1
Abeyrathne, P.D.2
Nazar, R.N.3
-
6
-
-
1642447091
-
Dim2p, a KH-domain protein required for small ribosomal subunit synthesis
-
Vanrobays E., Gélugne J., Caizergues-Ferrer M., Lafontaine D.L. Dim2p, a KH-domain protein required for small ribosomal subunit synthesis. RNA 2004, 10:645-656.
-
(2004)
RNA
, vol.10
, pp. 645-656
-
-
Vanrobays, E.1
Gélugne, J.2
Caizergues-Ferrer, M.3
Lafontaine, D.L.4
-
8
-
-
0037536219
-
The path from nucleolar 90S to cytoplasmic 40S pre-ribosomes
-
Schafer T., Strauss D., Petfalski E., Tollervey D., Hurt E. The path from nucleolar 90S to cytoplasmic 40S pre-ribosomes. EMBO J. 2003, 22:1370-1380.
-
(2003)
EMBO J.
, vol.22
, pp. 1370-1380
-
-
Schafer, T.1
Strauss, D.2
Petfalski, E.3
Tollervey, D.4
Hurt, E.5
-
9
-
-
25644436944
-
Translation initiation: structures, mechanisms and evolution
-
Marintchev A., Wagner G. Translation initiation: structures, mechanisms and evolution. Quart. Rev. Biophys. 2004, 37:197-284.
-
(2004)
Quart. Rev. Biophys.
, vol.37
, pp. 197-284
-
-
Marintchev, A.1
Wagner, G.2
-
10
-
-
0031587877
-
Ancient ciphers: translation in archaea
-
Dennis P.P. Ancient ciphers: translation in archaea. Cell 1997, 89:1007-1010.
-
(1997)
Cell
, vol.89
, pp. 1007-1010
-
-
Dennis, P.P.1
-
11
-
-
0032102006
-
Transcription and translation in archaea: a mosaic of eukaryal and bacterial features
-
Bell S.D., Jackson S.P. Transcription and translation in archaea: a mosaic of eukaryal and bacterial features. Trends Microbiol. 1998, 6:222-228.
-
(1998)
Trends Microbiol.
, vol.6
, pp. 222-228
-
-
Bell, S.D.1
Jackson, S.P.2
-
13
-
-
15944390620
-
Evolution of translational initiation: new insights from the archaea
-
Londei P. Evolution of translational initiation: new insights from the archaea. FEMS Microbiol. Rev. 2005, 29:185-200.
-
(2005)
FEMS Microbiol. Rev.
, vol.29
, pp. 185-200
-
-
Londei, P.1
-
14
-
-
0037050026
-
Functional organization of the yeast proteome by systematic analysis of protein complexes
-
Gavin A.C., Bosche M., Krause R., Grandi P., Marzioch M., Bauer A., et al. Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature 2002, 415:141-147.
-
(2002)
Nature
, vol.415
, pp. 141-147
-
-
Gavin, A.C.1
Bosche, M.2
Krause, R.3
Grandi, P.4
Marzioch, M.5
Bauer, A.6
-
15
-
-
2442714840
-
In vitro phosphorylation of initiation factor 2α (aIF2α) from hyperthermophilic archaeon Pyrococcus horikoshii OT3
-
Tahara M., Ohsawa A., Saito S., Kimura M. In vitro phosphorylation of initiation factor 2α (aIF2α) from hyperthermophilic archaeon Pyrococcus horikoshii OT3. J. Biochem. 2004, 135:479-485.
-
(2004)
J. Biochem.
, vol.135
, pp. 479-485
-
-
Tahara, M.1
Ohsawa, A.2
Saito, S.3
Kimura, M.4
-
16
-
-
0032964297
-
BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences
-
Tatusova T.A., Madden T.L. BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences. FEMS Microbiol. Lett. 1999, 174:247-250.
-
(1999)
FEMS Microbiol. Lett.
, vol.174
, pp. 247-250
-
-
Tatusova, T.A.1
Madden, T.L.2
-
17
-
-
20544464681
-
Structure-function relationships of the intact aIF2α subunit from the archaeon Pyrococcus abyssi
-
Yatime L., Schmitt E., Blanquet S., Mechulam Y. Structure-function relationships of the intact aIF2α subunit from the archaeon Pyrococcus abyssi. Biochemistry 2005, 44:8749-8756.
-
(2005)
Biochemistry
, vol.44
, pp. 8749-8756
-
-
Yatime, L.1
Schmitt, E.2
Blanquet, S.3
Mechulam, Y.4
-
18
-
-
0242321013
-
The crystal structure of the N-terminal region of the α subunit of translation initiation factor 2 (eIF2α) from Saccharomyces cerevisiae provides a view of the loop containing serine 51, the target of the eIF2α-specific kinases
-
Dhaliwal S., Hoffman D.W. The crystal structure of the N-terminal region of the α subunit of translation initiation factor 2 (eIF2α) from Saccharomyces cerevisiae provides a view of the loop containing serine 51, the target of the eIF2α-specific kinases. J. Mol. Biol. 2003, 334:187-195.
-
(2003)
J. Mol. Biol.
, vol.334
, pp. 187-195
-
-
Dhaliwal, S.1
Hoffman, D.W.2
-
19
-
-
4444333127
-
Solution structure of human initiation factor eIF2α reveals homology to the elongation factor eEF1B
-
Ito T., Marintchev A., Wagner G. Solution structure of human initiation factor eIF2α reveals homology to the elongation factor eEF1B. Structure 2004, 12:1693-1704.
-
(2004)
Structure
, vol.12
, pp. 1693-1704
-
-
Ito, T.1
Marintchev, A.2
Wagner, G.3
-
20
-
-
0034603208
-
Sequence-specific RNA binding by a Nova KH domain: implications for paraneoplastic disease and the fragile X syndrome
-
Lewis H.A., Musunuru K., Jensen K.B., Edo C., Chen H., Darnell R.B., Burley S.K. Sequence-specific RNA binding by a Nova KH domain: implications for paraneoplastic disease and the fragile X syndrome. Cell 2000, 100:323-332.
-
(2000)
Cell
, vol.100
, pp. 323-332
-
-
Lewis, H.A.1
Musunuru, K.2
Jensen, K.B.3
Edo, C.4
Chen, H.5
Darnell, R.B.6
Burley, S.K.7
-
21
-
-
0035798243
-
Structural basis for recognition of the intron branch site RNA by splicing factor 1
-
Liu Z., Luyten I., Bottomley M.J., Messias A.C., Houngninou-Molango S., Sprangers R., et al. Structural basis for recognition of the intron branch site RNA by splicing factor 1. Science 2001, 294:1098-1101.
-
(2001)
Science
, vol.294
, pp. 1098-1101
-
-
Liu, Z.1
Luyten, I.2
Bottomley, M.J.3
Messias, A.C.4
Houngninou-Molango, S.5
Sprangers, R.6
-
22
-
-
27144547978
-
Structure of a Mycobacterium tuberculosis NusA-RNA complex
-
Beuth B., Pennell S., Arnvig K.B., Martin S.R., Taylor I.A. Structure of a Mycobacterium tuberculosis NusA-RNA complex. EMBO J. 2005, 24:3576-3587.
-
(2005)
EMBO J.
, vol.24
, pp. 3576-3587
-
-
Beuth, B.1
Pennell, S.2
Arnvig, K.B.3
Martin, S.R.4
Taylor, I.A.5
-
23
-
-
70349301461
-
Structure of ERA in complex with the 3' end of 16S rRNA: implications for ribosome biogenesis
-
Tu C., Zhou X., Tropea J.E., Austin B.P., Waugh D.S., Court D.L., Ji X. Structure of ERA in complex with the 3' end of 16S rRNA: implications for ribosome biogenesis. Proc. Natl Acad. Sci. USA 2009, 106:14843-14848.
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, pp. 14843-14848
-
-
Tu, C.1
Zhou, X.2
Tropea, J.E.3
Austin, B.P.4
Waugh, D.S.5
Court, D.L.6
Ji, X.7
-
24
-
-
34548808591
-
Crystal structure of Dim2p, a pre-ribosomal RNA processing factor, from Pyrococcus horikoshii OT3 at 2.30 Å
-
Jia M.Z., Otsuka J., Lee W.C., Nagata K., Tanokura M. Crystal structure of Dim2p, a pre-ribosomal RNA processing factor, from Pyrococcus horikoshii OT3 at 2.30 Å. Proteins 2007, 69:428-432.
-
(2007)
Proteins
, vol.69
, pp. 428-432
-
-
Jia, M.Z.1
Otsuka, J.2
Lee, W.C.3
Nagata, K.4
Tanokura, M.5
-
25
-
-
0042121237
-
Multiple sequence alignment with the Clustal series of programs
-
Chenna R., Sugawara H., Koike T., Lopez R., Gibson T.J., Higgins D.G., Thompson J.D. Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Res. 2003, 31:3497-3500.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3497-3500
-
-
Chenna, R.1
Sugawara, H.2
Koike, T.3
Lopez, R.4
Gibson, T.J.5
Higgins, D.G.6
Thompson, J.D.7
-
26
-
-
0032961270
-
ESPript: analysis of multiple sequence alignments in PostScript
-
Gouet P., Courcelle E., Stuart D.I., Metoz F. ESPript: analysis of multiple sequence alignments in PostScript. Bioinformatics 1999, 15:305-308.
-
(1999)
Bioinformatics
, vol.15
, pp. 305-308
-
-
Gouet, P.1
Courcelle, E.2
Stuart, D.I.3
Metoz, F.4
-
27
-
-
0028922586
-
LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions
-
Wallace A.C., Laskowski R.A., Thornton J.M. LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions. Protein Eng. 1995, 8:127-134.
-
(1995)
Protein Eng.
, vol.8
, pp. 127-134
-
-
Wallace, A.C.1
Laskowski, R.A.2
Thornton, J.M.3
-
28
-
-
0035907317
-
Optimized RNA targets of two closely related triple KH domain proteins, heterogeneous nuclear ribonucleoprotein K and αCP-2KL, suggest distinct modes of RNA recognition
-
Thisted T., Lyakhov D.L., Liebhaber S.A. Optimized RNA targets of two closely related triple KH domain proteins, heterogeneous nuclear ribonucleoprotein K and αCP-2KL, suggest distinct modes of RNA recognition. J. Biol. Chem. 2001, 276:17484-17496.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 17484-17496
-
-
Thisted, T.1
Lyakhov, D.L.2
Liebhaber, S.A.3
-
29
-
-
33644790001
-
Structural switch of the γ subunit in an archaeal aIF2αγ heterodimer
-
Yatime L., Mechulam Y., Blanquet S., Schmitt E. Structural switch of the γ subunit in an archaeal aIF2αγ heterodimer. Structure 2006, 14:119-128.
-
(2006)
Structure
, vol.14
, pp. 119-128
-
-
Yatime, L.1
Mechulam, Y.2
Blanquet, S.3
Schmitt, E.4
-
30
-
-
50149109434
-
Crystal structure of the intact archaeal translation initiation factor 2 demonstrates very high conformational flexibility in the α- and β-subunits
-
Stolboushkina E., Nikonov S., Nikulin A., Bläsi U., Manstein D.J., Fedorov R., et al. Crystal structure of the intact archaeal translation initiation factor 2 demonstrates very high conformational flexibility in the α- and β-subunits. J. Mol. Biol. 2008, 382:680-691.
-
(2008)
J. Mol. Biol.
, vol.382
, pp. 680-691
-
-
Stolboushkina, E.1
Nikonov, S.2
Nikulin, A.3
Bläsi, U.4
Manstein, D.J.5
Fedorov, R.6
-
32
-
-
52949107245
-
TOR regulates the subcellular distribution of DIM2, a KH domain protein required for cotranscriptional ribosome assembly and pre-40S ribosome export
-
Vanrobays E., Leplus A., Osheim Y.N., Beyer A.L., Wacheul L., Lafontaine D.L. TOR regulates the subcellular distribution of DIM2, a KH domain protein required for cotranscriptional ribosome assembly and pre-40S ribosome export. RNA 2008, 14:1-13.
-
(2008)
RNA
, vol.14
, pp. 1-13
-
-
Vanrobays, E.1
Leplus, A.2
Osheim, Y.N.3
Beyer, A.L.4
Wacheul, L.5
Lafontaine, D.L.6
-
33
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski Z., Minor W. Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 1997, 276:307-326.
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
34
-
-
0014432781
-
Solvent content of protein crystals
-
Matthews B.W. Solvent content of protein crystals. J. Mol. Biol. 1968, 33:491-497.
-
(1968)
J. Mol. Biol.
, vol.33
, pp. 491-497
-
-
Matthews, B.W.1
-
35
-
-
3543012707
-
Crystallography and NMR system: a new software suite for macromolecular structure determination
-
Brünger A.T., Adams P.D., Clore G.M., Delano W.L., Gros P., Grosse-Kunstleve R.W. Crystallography and NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr., Sect. D: Biol. Crystallogr. 1998, 54:905-921.
-
(1998)
Acta Crystallogr., Sect. D: Biol. Crystallogr.
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
Adams, P.D.2
Clore, G.M.3
Delano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
-
36
-
-
0032790081
-
XtalView/Xfit-a versatile program for manipulating atomic coordinates and electron density
-
McRee D.E. XtalView/Xfit-a versatile program for manipulating atomic coordinates and electron density. J. Struct. Biol. 1999, 125:156-165.
-
(1999)
J. Struct. Biol.
, vol.125
, pp. 156-165
-
-
McRee, D.E.1
-
37
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
Murshudov G.N., Vagin A.A., Dodson E.J. Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr., Sect. D: Biol. Crystallogr. 1997, 53:240-255.
-
(1997)
Acta Crystallogr., Sect. D: Biol. Crystallogr.
, vol.53
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
39
-
-
0035964342
-
Electrostatics of nanosystems: application to microtubules and the ribosome
-
Baker N.A., Sept D., Joseph S., Holst M.J., McCammon J.A. Electrostatics of nanosystems: application to microtubules and the ribosome. Proc. Natl Acad. Sci. USA 2001, 98:10037-10041.
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 10037-10041
-
-
Baker, N.A.1
Sept, D.2
Joseph, S.3
Holst, M.J.4
McCammon, J.A.5
|