-
1
-
-
0034671865
-
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes
-
10.1126/science.290.5499.2105, 11118137
-
Riechmann JL, Heard J, Martin G, Reuber L, Jiang C, Keddie J, Adam L, Pineda O, Ratcliffe OJ, Samaha RR, Creelman R, Pilgrim M, Broun P, Zhang JZ, Ghandehari D, Sherman BK, Yu G. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 2000, 290:2105-2110. 10.1126/science.290.5499.2105, 11118137.
-
(2000)
Science
, vol.290
, pp. 2105-2110
-
-
Riechmann, J.L.1
Heard, J.2
Martin, G.3
Reuber, L.4
Jiang, C.5
Keddie, J.6
Adam, L.7
Pineda, O.8
Ratcliffe, O.J.9
Samaha, R.R.10
Creelman, R.11
Pilgrim, M.12
Broun, P.13
Zhang, J.Z.14
Ghandehari, D.15
Sherman, B.K.16
Yu, G.17
-
2
-
-
0005849132
-
Transcriptional regulation: a genomic overview
-
Amerian Society of Plant Biologists, Rockville, Meyerowitz CsaE
-
Riechmann JL. Transcriptional regulation: a genomic overview. 2002, Amerian Society of Plant Biologists, Rockville, Meyerowitz CsaE.
-
(2002)
-
-
Riechmann, J.L.1
-
3
-
-
26444578198
-
Transcription factors in rice: a genome-wide comparative analysis between monocots and eudicots
-
10.1007/s11103-005-6503-6, 16217612
-
Xiong Y, Liu T, Tian C, Sun S, Li J, Chen M. Transcription factors in rice: a genome-wide comparative analysis between monocots and eudicots. Plant Mol Biol 2005, 59:191-203. 10.1007/s11103-005-6503-6, 16217612.
-
(2005)
Plant Mol Biol
, vol.59
, pp. 191-203
-
-
Xiong, Y.1
Liu, T.2
Tian, C.3
Sun, S.4
Li, J.5
Chen, M.6
-
4
-
-
0347492019
-
AGRIS: Arabidopsis gene regulatory information server, an information resource of Arabidopsis cis-regulatory elements and transcription factors
-
10.1186/1471-2105-4-25, 166152, 12820902
-
Davuluri RV, Sun H, Palaniswamy SK, Matthews N, Molina C, Kurtz M, Grotewold E. AGRIS: Arabidopsis gene regulatory information server, an information resource of Arabidopsis cis-regulatory elements and transcription factors. BMC Bioinformatics 2003, 4:25. 10.1186/1471-2105-4-25, 166152, 12820902.
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 25
-
-
Davuluri, R.V.1
Sun, H.2
Palaniswamy, S.K.3
Matthews, N.4
Molina, C.5
Kurtz, M.6
Grotewold, E.7
-
5
-
-
0037208166
-
TRANSFAC: transcriptional regulation, from patterns to profiles
-
Matys V, Fricke E, Geffers R, Gössling E, Haubrock M, Hehl R, Hornischer K, Karas D, Kel AE, Kel-Margoulis OV, Kloos DU, Land S, Lewicki-Potapov B, Michael H, Münch R, Reuter I, Rotert S, Saxel H, Scheer M, Thiele S, Wingender E. TRANSFAC: transcriptional regulation, from patterns to profiles. Nucleic Acids Res 2000, 31:374-378.
-
(2000)
Nucleic Acids Res
, vol.31
, pp. 374-378
-
-
Matys, V.1
Fricke, E.2
Geffers, R.3
Gössling, E.4
Haubrock, M.5
Hehl, R.6
Hornischer, K.7
Karas, D.8
Kel, A.E.9
Kel-Margoulis, O.V.10
Kloos, D.U.11
Land, S.12
Lewicki-Potapov, B.13
Michael, H.14
Münch, R.15
Reuter, I.16
Rotert, S.17
Saxel, H.18
Scheer, M.19
Thiele, S.20
Wingender, E.21
more..
-
6
-
-
0347125306
-
TrSDB: a proteome database of transcription factors
-
Database, 10.1093/nar/gkh101, 308835, 14681387
-
Hermoso A, Aguilar D, Aviles FX, Querol E. TrSDB: a proteome database of transcription factors. Nucleic acids Res 2004, (32 Database):D171-173. 10.1093/nar/gkh101, 308835, 14681387.
-
(2004)
Nucleic acids Res
, Issue.32
-
-
Hermoso, A.1
Aguilar, D.2
Aviles, F.X.3
Querol, E.4
-
7
-
-
19544382556
-
DATF: a database of Arabidopsis transcription factors
-
10.1093/bioinformatics/bti334, 15731212
-
Guo A, He K, Liu D, Bai S, Gu X, Wei L, Luo J. DATF: a database of Arabidopsis transcription factors. Bioinformatics 2005, 21:2568-2569. 10.1093/bioinformatics/bti334, 15731212.
-
(2005)
Bioinformatics
, vol.21
, pp. 2568-2569
-
-
Guo, A.1
He, K.2
Liu, D.3
Bai, S.4
Gu, X.5
Wei, L.6
Luo, J.7
-
8
-
-
33646884846
-
DRTF: a database of rice transcription factors
-
10.1093/bioinformatics/btl107, 16551659
-
Gao G, Zhong Y, Guo A, Zhu Q, Tang W, Zheng W, Gu X, Wei L, Luo J. DRTF: a database of rice transcription factors. Bioinformatics 2006, 22:1286-1287. 10.1093/bioinformatics/btl107, 16551659.
-
(2006)
Bioinformatics
, vol.22
, pp. 1286-1287
-
-
Gao, G.1
Zhong, Y.2
Guo, A.3
Zhu, Q.4
Tang, W.5
Zheng, W.6
Gu, X.7
Wei, L.8
Luo, J.9
-
9
-
-
0027249595
-
DbEST - Database for expressed sequence tags
-
10.1038/ng0893-332, 8401577
-
Boguski MS, Lowe TMJ, Tolstoshev CM. DbEST - Database for expressed sequence tags. Nature Genet 1993, 4:332-333. 10.1038/ng0893-332, 8401577.
-
(1993)
Nature Genet
, vol.4
, pp. 332-333
-
-
Boguski, M.S.1
Lowe, T.M.J.2
Tolstoshev, C.M.3
-
10
-
-
0033965855
-
The TIGR Gene Indices: reconstruction and representation of expressed gene sequences
-
10.1093/nar/28.1.141, 102391, 10592205
-
Quackenbush J, Liang F, Holt I, Pertea G, Upton J. The TIGR Gene Indices: reconstruction and representation of expressed gene sequences. Nucleic Acids Research 2000, 28:141-145. 10.1093/nar/28.1.141, 102391, 10592205.
-
(2000)
Nucleic Acids Research
, vol.28
, pp. 141-145
-
-
Quackenbush, J.1
Liang, F.2
Holt, I.3
Pertea, G.4
Upton, J.5
-
11
-
-
36048991514
-
Molecular and phylogenetic analysis of MADS-box genes of MIKC type and chromosome location of SEP-like genes in wheat (Triticum aestivum L.)
-
10.1007/s00438-007-0285-2, 17846794
-
Paolacci AR, Tanzarella OA, Porceddu E, Varotto S, Ciaffi M. Molecular and phylogenetic analysis of MADS-box genes of MIKC type and chromosome location of SEP-like genes in wheat (Triticum aestivum L.). Mol Genet Genomics 2007, 278:689-708. 10.1007/s00438-007-0285-2, 17846794.
-
(2007)
Mol Genet Genomics
, vol.278
, pp. 689-708
-
-
Paolacci, A.R.1
Tanzarella, O.A.2
Porceddu, E.3
Varotto, S.4
Ciaffi, M.5
-
12
-
-
34848840901
-
Genome-wide identification and expression analysis of the NF-Y family of transcription factors in Triticum aestivum
-
10.1007/s11103-007-9200-9, 17598077
-
Stephenson TJ, McIntyre CL, Collet C, Xue GP. Genome-wide identification and expression analysis of the NF-Y family of transcription factors in Triticum aestivum. Plant Mol Biol 2007, 65:77-92. 10.1007/s11103-007-9200-9, 17598077.
-
(2007)
Plant Mol Biol
, vol.65
, pp. 77-92
-
-
Stephenson, T.J.1
McIntyre, C.L.2
Collet, C.3
Xue, G.P.4
-
13
-
-
26444507732
-
Isolation and characterization of genes encoding Myb transcription factor in wheat (Triticum aestivum L.)
-
Chen R, Ni Z, Nie X, Qin Y, Dong G, Sun Q. Isolation and characterization of genes encoding Myb transcription factor in wheat (Triticum aestivum L.). Plant Science 2005, 169:1146-1154.
-
(2005)
Plant Science
, vol.169
, pp. 1146-1154
-
-
Chen, R.1
Ni, Z.2
Nie, X.3
Qin, Y.4
Dong, G.5
Sun, Q.6
-
14
-
-
0036886294
-
The Dof family of plant transcription factors
-
10.1016/S1360-1385(02)02362-2, 12475498
-
Yanagisawa S. The Dof family of plant transcription factors. Trends Plant Sci 2002, 7:555-560. 10.1016/S1360-1385(02)02362-2, 12475498.
-
(2002)
Trends Plant Sci
, vol.7
, pp. 555-560
-
-
Yanagisawa, S.1
-
15
-
-
0642340497
-
Genome-wide comparative phylogenetic analysis of the rice and Arabidopsis Dof gene families
-
10.1186/1471-2148-3-17, 184357, 12877745
-
Lijavetzky D, Carbonero P, Vicente-Carbajosa J. Genome-wide comparative phylogenetic analysis of the rice and Arabidopsis Dof gene families. BMC Evol Biol 2003, 3:17-28. 10.1186/1471-2148-3-17, 184357, 12877745.
-
(2003)
BMC Evol Biol
, vol.3
, pp. 17-28
-
-
Lijavetzky, D.1
Carbonero, P.2
Vicente-Carbajosa, J.3
-
16
-
-
1542378794
-
The Dof domain, a zinc finger DNA-binding domain conserved only in higher plants, truly functions as a Cys2/Cys2 Zn finger domain
-
10.1111/j.1365-313X.2003.01997.x, 14871313
-
Umemura Y, Ishiduka T, Yamamoto R, Esaka M. The Dof domain, a zinc finger DNA-binding domain conserved only in higher plants, truly functions as a Cys2/Cys2 Zn finger domain. Plant J 2004, 37:741-749. 10.1111/j.1365-313X.2003.01997.x, 14871313.
-
(2004)
Plant J
, vol.37
, pp. 741-749
-
-
Umemura, Y.1
Ishiduka, T.2
Yamamoto, R.3
Esaka, M.4
-
17
-
-
0033036835
-
Diversity and similarity among recognition sequences of Dof transcription factors
-
10.1046/j.1365-313X.1999.00363.x, 10074718
-
Yanagisawa S, Schmidt RJ. Diversity and similarity among recognition sequences of Dof transcription factors. Plant J 1999, 17:209-214. 10.1046/j.1365-313X.1999.00363.x, 10074718.
-
(1999)
Plant J
, vol.17
, pp. 209-214
-
-
Yanagisawa, S.1
Schmidt, R.J.2
-
18
-
-
33947354577
-
The family of DOF transcription factors: from green unicellular algae to vascular plants
-
10.1007/s00438-006-0186-9, 17180359
-
Moreno-Risueno MA, Martínez M, Vicente-Carbajosa J, Carbonero P. The family of DOF transcription factors: from green unicellular algae to vascular plants. Mol Genet Genomics 2007, 277:379-390. 10.1007/s00438-006-0186-9, 17180359.
-
(2007)
Mol Genet Genomics
, vol.277
, pp. 379-390
-
-
Moreno-Risueno, M.A.1
Martínez, M.2
Vicente-Carbajosa, J.3
Carbonero, P.4
-
19
-
-
1842685867
-
Characterization of soybean genomic features by analysis of its expressed sequence tags
-
10.1007/s00122-003-1499-2, 14624337
-
Tian AG, Wang J, Cui P, Han YJ, Xu H, Cong LJ, Huang XG, Wang XL, Jiao YZ, Wang BJ, Wang YJ, Zhang JS, Chen SY. Characterization of soybean genomic features by analysis of its expressed sequence tags. Theor Appl Genet 2004, 108:903-13. 10.1007/s00122-003-1499-2, 14624337.
-
(2004)
Theor Appl Genet
, vol.108
, pp. 903-913
-
-
Tian, A.G.1
Wang, J.2
Cui, P.3
Han, Y.J.4
Xu, H.5
Cong, L.J.6
Huang, X.G.7
Wang, X.L.8
Jiao, Y.Z.9
Wang, B.J.10
Wang, Y.J.11
Zhang, J.S.12
Chen, S.Y.13
-
20
-
-
35848936305
-
The soybean Dof-type transcription factor genes, GmDof4 and GmDof11, enhance lipid content in the seeds of transgenic Arabidopsis plants
-
10.1111/j.1365-313X.2007.03268.x, 17877700
-
Wang HW, Zhang B, Hao YJ, Huang J, Tian AG, Liao Y, Zhang JS, Chen SY. The soybean Dof-type transcription factor genes, GmDof4 and GmDof11, enhance lipid content in the seeds of transgenic Arabidopsis plants. Plant J 2007, 52:716-29. 10.1111/j.1365-313X.2007.03268.x, 17877700.
-
(2007)
Plant J
, vol.52
, pp. 716-729
-
-
Wang, H.W.1
Zhang, B.2
Hao, Y.J.3
Huang, J.4
Tian, A.G.5
Liao, Y.6
Zhang, J.S.7
Chen, S.Y.8
-
21
-
-
0032190502
-
An endosperm-specific DOF protein from barley, highly conserved in wheat, binds to and activates transcription from prolamin-box of a native B-hordein promoter in barley endosperm
-
10.1046/j.1365-313x.1998.00275.x, 9807827
-
Mena M, Vicente-Carbajosa J, Schmidt RJ, Carbonero P. An endosperm-specific DOF protein from barley, highly conserved in wheat, binds to and activates transcription from prolamin-box of a native B-hordein promoter in barley endosperm. Plant J 1998, 16:53-62. 10.1046/j.1365-313x.1998.00275.x, 9807827.
-
(1998)
Plant J
, vol.16
, pp. 53-62
-
-
Mena, M.1
Vicente-Carbajosa, J.2
Schmidt, R.J.3
Carbonero, P.4
-
22
-
-
0037263489
-
SAD: a new DOF protein from barley that activates transcription of a cathepsin B-like thiol protease gene in the aleurone of germinating seeds
-
10.1046/j.1365-313X.2003.01628.x, 12535346
-
Isabel-LaMoneda I, Diaz I, Martinez M, Mena M, Carbonero P. SAD: a new DOF protein from barley that activates transcription of a cathepsin B-like thiol protease gene in the aleurone of germinating seeds. Plant J 2003, 33:329-340. 10.1046/j.1365-313X.2003.01628.x, 12535346.
-
(2003)
Plant J
, vol.33
, pp. 329-340
-
-
Isabel-LaMoneda, I.1
Diaz, I.2
Martinez, M.3
Mena, M.4
Carbonero, P.5
-
23
-
-
34547109079
-
The HvDOF19 transcription factor mediates the abscisic acid-dependent repression of hydrolase genes in germinating barley aleurone
-
10.1111/j.1365-313X.2007.03146.x, 17565581
-
Moreno-Risueno MA, Diaz I, Carrillo L, Fuentes R, Carbonero P. The HvDOF19 transcription factor mediates the abscisic acid-dependent repression of hydrolase genes in germinating barley aleurone. Plant J 2007, 51:352-365. 10.1111/j.1365-313X.2007.03146.x, 17565581.
-
(2007)
Plant J
, vol.51
, pp. 352-365
-
-
Moreno-Risueno, M.A.1
Diaz, I.2
Carrillo, L.3
Fuentes, R.4
Carbonero, P.5
-
24
-
-
0032871848
-
Transcription activation mediated by the bZIP factor SPA on the endosperm box is modulated by ESBF-1 in vitro
-
10.1046/j.1365-313X.1999.00522.x, 10476064
-
Conlan RS, Hammond-Kosack M, Bevan M. Transcription activation mediated by the bZIP factor SPA on the endosperm box is modulated by ESBF-1 in vitro. Plant J 1999, 19:173-181. 10.1046/j.1365-313X.1999.00522.x, 10476064.
-
(1999)
Plant J
, vol.19
, pp. 173-181
-
-
Conlan, R.S.1
Hammond-Kosack, M.2
Bevan, M.3
-
25
-
-
33645217031
-
Isolation and characterization of TaDof1 transcription factor in wheat (Triticum aestivum L)
-
Chen R, Ni Z, Qin Y, Nie X, Lin Z, Dong G, Sun Q. Isolation and characterization of TaDof1 transcription factor in wheat (Triticum aestivum L). DNA Seq 2005, 16:358-63.
-
(2005)
DNA Seq
, vol.16
, pp. 358-363
-
-
Chen, R.1
Ni, Z.2
Qin, Y.3
Nie, X.4
Lin, Z.5
Dong, G.6
Sun, Q.7
-
26
-
-
33747585837
-
Single nucleotide polymorphism, genetic mapping, and expression of genes coding for the DOF wheat prolamin-box binding factor
-
10.1007/s10142-006-0022-7, 16568337
-
Ravel C, Nagy IJ, Martre P, Sourdille P, Dardevet M, Balfourier F, Pont C, Giancola S, Praud S, Charmet G. Single nucleotide polymorphism, genetic mapping, and expression of genes coding for the DOF wheat prolamin-box binding factor. Funct Integr Genomics 2006, 6:310-321. 10.1007/s10142-006-0022-7, 16568337.
-
(2006)
Funct Integr Genomics
, vol.6
, pp. 310-321
-
-
Ravel, C.1
Nagy, I.J.2
Martre, P.3
Sourdille, P.4
Dardevet, M.5
Balfourier, F.6
Pont, C.7
Giancola, S.8
Praud, S.9
Charmet, G.10
-
27
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
10.1093/nar/25.17.3389, 146917, 9254694
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997, 25:3389-3402. 10.1093/nar/25.17.3389, 146917, 9254694.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
28
-
-
61349110708
-
Integrating genes and phenotype: a wheat-Arabidopsis-rice glycosyltransferase database for candidate gene analyses
-
10.1007/s10142-008-0100-0, 19005709
-
Sado PE, Tessier D, Vasseur M, Elmorjani K, Guillon F, Saulnier L. Integrating genes and phenotype: a wheat-Arabidopsis-rice glycosyltransferase database for candidate gene analyses. Funct Integr Genomics 2009, 9:43-58. 10.1007/s10142-008-0100-0, 19005709.
-
(2009)
Funct Integr Genomics
, vol.9
, pp. 43-58
-
-
Sado, P.E.1
Tessier, D.2
Vasseur, M.3
Elmorjani, K.4
Guillon, F.5
Saulnier, L.6
-
29
-
-
23744481496
-
Engrailed ZmOCL1 fusions cause a transient reduction of kernel size in maize
-
10.1007/s11103-005-5219-y, 16028121
-
Khaled AS, Vernoud V, Ingram GC, Perez P, Sarda X, Rogowsky PM. Engrailed ZmOCL1 fusions cause a transient reduction of kernel size in maize. Plant Mol Biol 2005, 58:123-139. 10.1007/s11103-005-5219-y, 16028121.
-
(2005)
Plant Mol Biol
, vol.58
, pp. 123-139
-
-
Khaled, A.S.1
Vernoud, V.2
Ingram, G.C.3
Perez, P.4
Sarda, X.5
Rogowsky, P.M.6
-
30
-
-
1842483281
-
Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper -Excel-based tool using pair-wise correlations
-
10.1023/B:BILE.0000019559.84305.47, 15127793
-
Pfaffl MW, Tichopad A, Prgomet C, Neuvians TP. Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper -Excel-based tool using pair-wise correlations. Biotechnol Lett 2004, 26:509-515. 10.1023/B:BILE.0000019559.84305.47, 15127793.
-
(2004)
Biotechnol Lett
, vol.26
, pp. 509-515
-
-
Pfaffl, M.W.1
Tichopad, A.2
Prgomet, C.3
Neuvians, T.P.4
-
31
-
-
0031574072
-
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
-
10.1093/nar/25.24.4876, 147148, 9396791
-
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 1997, 25:4876-82. 10.1093/nar/25.24.4876, 147148, 9396791.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
32
-
-
0030203863
-
Treeview: an application to display phylogenetic trees on personal computers
-
Page RD. Treeview: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 1996, 12:537-538.
-
(1996)
Comput Appl Biosci
, vol.12
, pp. 537-538
-
-
Page, R.D.1
-
33
-
-
38549132439
-
PlantTFDB: a comprehensive plant transcription factor database
-
Database, 2238823, 17933783
-
Guo AY, Chen X, Gao G, Zhang H, Zhu QH, Liu XC, Zhong YF, Gu X, He K, Luo J. PlantTFDB: a comprehensive plant transcription factor database. Nucleic Acids Res 2008, (36 Database):D966-9. 2238823, 17933783.
-
(2008)
Nucleic Acids Res
, Issue.36
-
-
Guo, A.Y.1
Chen, X.2
Gao, G.3
Zhang, H.4
Zhu, Q.H.5
Liu, X.C.6
Zhong, Y.F.7
Gu, X.8
He, K.9
Luo, J.10
-
34
-
-
70350023215
-
Members of the Dof transcription factor family in Triticum aestivum are associated with light-mediated gene regulation
-
10.1007/s10142-009-0130-2, 19578911
-
Shaw LM, McIntyre CL, Gresshoff PM, Xue GP. Members of the Dof transcription factor family in Triticum aestivum are associated with light-mediated gene regulation. Funct Integr Genomics 2009, 9:485-98. 10.1007/s10142-009-0130-2, 19578911.
-
(2009)
Funct Integr Genomics
, vol.9
, pp. 485-498
-
-
Shaw, L.M.1
McIntyre, C.L.2
Gresshoff, P.M.3
Xue, G.P.4
-
35
-
-
0033828167
-
A genomic perspective on plant transcription factors
-
10.1016/S1369-5266(00)00107-2, 11019812
-
Riechmann JL, Ratcliffe OJ. A genomic perspective on plant transcription factors. Curr Opin Plant Biol 2000, 3:423-434. 10.1016/S1369-5266(00)00107-2, 11019812.
-
(2000)
Curr Opin Plant Biol
, vol.3
, pp. 423-434
-
-
Riechmann, J.L.1
Ratcliffe, O.J.2
-
36
-
-
58449094652
-
GRASSIUS: a platform for comparative regulatory genomics across the grasses
-
10.1104/pp.108.128579, 2613736, 18987217
-
Yilmaz A, Nishiyama MY, Fuentes BG, Souza GM, Janies D, Gray J, Grotewold E. GRASSIUS: a platform for comparative regulatory genomics across the grasses. Plant Physiol 2009, 149:171-80. 10.1104/pp.108.128579, 2613736, 18987217.
-
(2009)
Plant Physiol
, vol.149
, pp. 171-180
-
-
Yilmaz, A.1
Nishiyama, M.Y.2
Fuentes, B.G.3
Souza, G.M.4
Janies, D.5
Gray, J.6
Grotewold, E.7
-
37
-
-
33750030513
-
Characterizing the composition and evolution of homoeologous genomes in hexaploid wheat through BAC-end sequencing on chromosome 3B
-
10.1111/j.1365-313X.2006.02891.x, 17010109
-
Paux E, Roger D, Badaeva E, Gay G, Bernard M, Sourdille P, Feuillet C. Characterizing the composition and evolution of homoeologous genomes in hexaploid wheat through BAC-end sequencing on chromosome 3B. Plant J 2006, 48:463-74. 10.1111/j.1365-313X.2006.02891.x, 17010109.
-
(2006)
Plant J
, vol.48
, pp. 463-474
-
-
Paux, E.1
Roger, D.2
Badaeva, E.3
Gay, G.4
Bernard, M.5
Sourdille, P.6
Feuillet, C.7
-
38
-
-
77952280746
-
Structure and organization of the wheat genome- the number of genes in the hexaploid wheat genome
-
Devos KM, Costa de Oliveira A, Xu X, Estill JC, Estep M, Jogi A, Morales M, Pinheiro J, San Miguel P, Bennetzen FL. Structure and organization of the wheat genome- the number of genes in the hexaploid wheat genome. , http://hdl.handle.net/2123/3389
-
-
-
Devos, K.M.1
Costa de Oliveira, A.2
Xu, X.3
Estill, J.C.4
Estep, M.5
Jogi, A.6
Morales, M.7
Pinheiro, J.8
San Miguel, P.9
Bennetzen, F.L.10
-
39
-
-
33749451228
-
Coding limits on the number of transcription factors
-
10.1186/1471-2164-7-239, 1590034, 16984633
-
Itzkovitz S, Tlusty T, Alon U. Coding limits on the number of transcription factors. BMC Genomics 2006, 7:239. 10.1186/1471-2164-7-239, 1590034, 16984633.
-
(2006)
BMC Genomics
, vol.7
, pp. 239
-
-
Itzkovitz, S.1
Tlusty, T.2
Alon, U.3
-
40
-
-
42049115271
-
Transcriptome analysis of grain development in hexaploid wheat
-
10.1186/1471-2164-9-121, 2292175, 18325108
-
Wan Y, Poole RL, Huttly AK, Toscano-Underwood C, Feeney K, Welham S, Gooding MJ, Mills C, Edwards KJ, Shewry PR, Mitchell RA. Transcriptome analysis of grain development in hexaploid wheat. BMC Genomics 2008, 9:121. 10.1186/1471-2164-9-121, 2292175, 18325108.
-
(2008)
BMC Genomics
, vol.9
, pp. 121
-
-
Wan, Y.1
Poole, R.L.2
Huttly, A.K.3
Toscano-Underwood, C.4
Feeney, K.5
Welham, S.6
Gooding, M.J.7
Mills, C.8
Edwards, K.J.9
Shewry, P.R.10
Mitchell, R.A.11
-
41
-
-
34249710284
-
Measuring global gene expression in polyploidy; a cautionary note from allohexaploid wheat
-
doi: 10.1007/s10142-007-0046-7, 10.1007/s10142-007-0046-7, 17364174
-
Poole R, Barker G, Wilson ID, Coghill JA, Edwards KJ. Measuring global gene expression in polyploidy; a cautionary note from allohexaploid wheat. Funct Integr Genomics 2007, 7:207-219. doi: 10.1007/s10142-007-0046-7, 10.1007/s10142-007-0046-7, 17364174.
-
(2007)
Funct Integr Genomics
, vol.7
, pp. 207-219
-
-
Poole, R.1
Barker, G.2
Wilson, I.D.3
Coghill, J.A.4
Edwards, K.J.5
-
42
-
-
68049095834
-
Comparative transcriptomics in the Triticeae
-
10.1186/1471-2164-10-285, 2717122, 19558723
-
Schreiber AW, Sutton T, Caldo RA, Kalashyan E, Lovell B, Mayo G, Muehlbauer GJ, Druka A, Waugh R, Wise RP, Langridge P, Baumann U. Comparative transcriptomics in the Triticeae. BMC Genomics 2009, 10:285. 10.1186/1471-2164-10-285, 2717122, 19558723.
-
(2009)
BMC Genomics
, vol.10
, pp. 285
-
-
Schreiber, A.W.1
Sutton, T.2
Caldo, R.A.3
Kalashyan, E.4
Lovell, B.5
Mayo, G.6
Muehlbauer, G.J.7
Druka, A.8
Waugh, R.9
Wise, R.P.10
Langridge, P.11
Baumann, U.12
-
43
-
-
45749122789
-
Structural and functional properties of Viviparous1 genes in dormant wheat
-
10.1266/ggs.83.153, 18506099
-
Utsugi S, Nakamura S, Noda K, Maekawa M. Structural and functional properties of Viviparous1 genes in dormant wheat. Genes Genet Syst 2008, 83:153-66. 10.1266/ggs.83.153, 18506099.
-
(2008)
Genes Genet Syst
, vol.83
, pp. 153-166
-
-
Utsugi, S.1
Nakamura, S.2
Noda, K.3
Maekawa, M.4
-
44
-
-
33744951518
-
Differential regulation of transcript accumulation and alternative splicing of a DREB2 homolog under abiotic stress conditions in common wheat
-
10.1266/ggs.81.77, 16755132
-
Egawa C, Kobayashi F, Ishibashi M, Nakamura T, Nakamura C, Takumi S. Differential regulation of transcript accumulation and alternative splicing of a DREB2 homolog under abiotic stress conditions in common wheat. Genes Genet Syst 2006, 81:77-91. 10.1266/ggs.81.77, 16755132.
-
(2006)
Genes Genet Syst
, vol.81
, pp. 77-91
-
-
Egawa, C.1
Kobayashi, F.2
Ishibashi, M.3
Nakamura, T.4
Nakamura, C.5
Takumi, S.6
-
45
-
-
0346373740
-
Discrimination of homoeologous gene expression in hexaploid wheat by SNP analysis of contigs grouped from a large number of expressed sequence tags
-
10.1007/s00438-003-0939-7, 14595557
-
Mochida K, Yamazaki Y, Ogihara Y. Discrimination of homoeologous gene expression in hexaploid wheat by SNP analysis of contigs grouped from a large number of expressed sequence tags. Mol Genet Genomics 2003, 270:371-7. 10.1007/s00438-003-0939-7, 14595557.
-
(2003)
Mol Genet Genomics
, vol.270
, pp. 371-377
-
-
Mochida, K.1
Yamazaki, Y.2
Ogihara, Y.3
-
46
-
-
27144546673
-
Molecular basis of evolutionary events that shaped the hardness locus in diploid and polyploid wheat species (Triticum and Aegilops)
-
10.1105/tpc.104.029181, 1087984, 15749759
-
Chantret N, Salse J, Sabot F, Rahman S, Bellec A, Laubin B, Dubois I, Dossat C, Sourdille P, Joudrier P, Gautier MF, Cattolico L, Beckert M, Aubourg S, Weissenbach J, Caboche M, Bernard M, Leroy P, Chalhoub B. Molecular basis of evolutionary events that shaped the hardness locus in diploid and polyploid wheat species (Triticum and Aegilops). Plant Cell 2005, 17:1033-45. 10.1105/tpc.104.029181, 1087984, 15749759.
-
(2005)
Plant Cell
, vol.17
, pp. 1033-1045
-
-
Chantret, N.1
Salse, J.2
Sabot, F.3
Rahman, S.4
Bellec, A.5
Laubin, B.6
Dubois, I.7
Dossat, C.8
Sourdille, P.9
Joudrier, P.10
Gautier, M.F.11
Cattolico, L.12
Beckert, M.13
Aubourg, S.14
Weissenbach, J.15
Caboche, M.16
Bernard, M.17
Leroy, P.18
Chalhoub, B.19
-
47
-
-
71049119344
-
Nucleotide Polymorphism in the Wheat Transcriptional Activator Spa Influences Its Pattern of Expression and Has Pleiotropic Effects on Grain Protein Composition, Dough Viscoelasticity and Grain Hardness
-
2785959, 19828671
-
Ravel C, Martre P, Romeuf I, Dardevet M, El-Malki R, Bordes J, Duchateau N, Brunel D, Balfourier F, Charmet G. Nucleotide Polymorphism in the Wheat Transcriptional Activator Spa Influences Its Pattern of Expression and Has Pleiotropic Effects on Grain Protein Composition, Dough Viscoelasticity and Grain Hardness. Plant Physiol 2009, 2785959, 19828671.
-
(2009)
Plant Physiol
-
-
Ravel, C.1
Martre, P.2
Romeuf, I.3
Dardevet, M.4
El-Malki, R.5
Bordes, J.6
Duchateau, N.7
Brunel, D.8
Balfourier, F.9
Charmet, G.10
|