Protein expression profiles of necrosis and apoptosis induced by 5-fluoro-2′-deoxyuridine in mouse cancer cells

Journal of Proteome Research

Volumn 9, Issue 5, 2010, Pages 2329-2338

  Sato, Akira ^a   Satake, Akito ^a   Hiramoto, Akiko ^a   Wataya, Yusuke ^a   Kim, Hye Sook ^a  

^a OKAYAMA UNIVERSITY   (Japan)

Author keywords

5 fluoro 2 deoxyuridine (FUdR); Apoptosis; Cell death; Cytokeratin 19; Intermediate filament; Lamin B1; Necrosis; Proteome analysis; SiRNA

Indexed keywords

CASPASE; CYTOKERATIN 19; FLOXURIDINE; INTERMEDIATE FILAMENT PROTEIN; SMALL INTERFERING RNA;

ANIMAL CELL; APOPTOSIS; ARTICLE; CANCER CELL; CELL DEATH; CELL STRUCTURE; CONTROLLED STUDY; CYTOSKELETON; MASS SPECTROMETRY; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DEGRADATION; PROTEIN EXPRESSION;

AMINO ACID SEQUENCE; ANIMALS; APOPTOSIS; BLOTTING, WESTERN; CELL LINE, TUMOR; CELL SIZE; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; FLOXURIDINE; GENE EXPRESSION PROFILING; KERATIN-19; MAMMARY NEOPLASMS, EXPERIMENTAL; MICE; MOLECULAR SEQUENCE DATA; NECROSIS; PROTEOME; RNA INTERFERENCE; RNA, SMALL INTERFERING;

EID: 77952055632     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr9010537     Document Type: Article

References (29)

1. Klose, J.; Kobalz, U. Two-dimensional electrophoresis of proteins: an updated protocol and implications for a functional analysis of the genome Electrophoresis 1995, 16, 1034-1059
2. Farber, E. Programmed cell death: necrosis versus apoptosis Mod. Pathol. 1994, 7, 605-609
3. Kerr, J. F. Shrinkage necrosis: a distinct mode of cellular death J. Pathol. 1971, 105, 13-20
4. Thiede, B.; Rudel, T. Proteome analysis of apoptotic cells Mass Spectrom. Rev. 2004, 23, 333-349
5. Kakutani, T.; Ebara, Y.; Kanja, K.; Hidaka, M. Different modes of cell death induced by 5-fluoro-2′-deoxyuridine in two clones of the mouse mammary tumor FM3A cell line Biochem. Biophys. Res. Commun. 1998, 247, 773-779 (Pubitemid 28418467)
6. Sato, A.; Hiramoto, A.; Uchikubo, Y.; Miyazaki, E. Gene expression profiles of necrosis and apoptosis induced by 5-fluoro-2′-deoxyuridine Genomics 2008, 92, 9-17
7. Yoshioka, A.; Tanaka, S.; Hiraoka, O.; Koyama, Y. Deoxyribonucleoside triphosphate imbalance. 5-Fluorodeoxyuridine-induced DNA double strand breaks in mouse FM3A cells and the mechanism of cell death J. Biol. Chem. 1987, 262, 8235-8241
8. Sato, A.; Hiramoto, A.; Satake, A.; Miyazaki, E. Association of nuclear membrane protein lamin B1 with necrosis and apoptosis in cell death induced by 5-fluoro-2′-deoxyuridine Nucleosides Nucleotides Nucleic Acids 2008, 27, 433-438
9. Cohen, M.; Lee, K. K.; Wilson, K. L.; Gruenbaum, Y. Transcriptional repression, apoptosis, human disease and the functional evolution of the nuclear lamina Trends Biochem. Sci. 2001, 26, 41-47
10. Wilson, K. L.; Zastrow, M. S.; Lee, K. K. Lamins and disease: insights into nuclear infrastructure Cell 2001, 104, 647-650
11. Goldman, R. D.; Gruenbaum, Y.; Moir, R. D.; Shumaker, D. K. Nuclear lamins: building blocks of nuclear architecture Genes Dev. 2002, 16, 533-547
12. Burke, B.; Stewart, C. L. Life at the edge: the nuclear envelope and human disease Nat. Rev. Mol. Cell Biol. 2002, 3, 575-585
13. Hutchison, C. J. Lamins: building blocks or regulators of gene expression Nat. Rev. Mol. Cell Biol. 2002, 3, 848-858
14. Ku, N. O.; Zhou, X.; Toivola, D. M.; Omary, M. B. The cytoskeleton of digestive epithelia in health and disease Am. J. Physiol. 1999, 277, G1108-1137
15. Schweizer, J.; Bowden, P. E.; Coulombe, P. A.; Langbein, L. New consensus nomenclature for mammalian keratins J. Cell Biol. 2006, 174, 169-174
16. Omary, M. B.; Coulombe, P. A.; McLean, W. H. Intermediate filament proteins and their associated diseases N. Engl. J. Med. 2004, 351, 2087-2100
17. Omary, M. B.; Ku, N. O.; Tao, G. Z.; Toivola, D. M. Heads and tails" of intermediate filament phosphorylation: multiple sites and functional insights Trends Biochem. Sci. 2006, 31, 383-394
18. Wu, Y. J.; Rheinwald, J. G. A new small (40 kd) keratin filament protein made by some cultured human squamous cell carcinomas Cell 1981, 25, 627-635
19. Moll, R.; von Bassewitz, D. B.; Schulz, U.; Franke, W. W. An unusual type of cytokeratin filament in cells of a human cloacogenic carcinoma derived from the anorectal transition zone Differentiation 1982, 22, 25-40
20. Ku, N. O.; Liao, J.; Omary, M. B. Apoptosis generates stable fragments of human type I keratins J. Biol. Chem. 1997, 272, 33197-33203
21. Ku, N. O.; Omary, M. B. Effect of mutation and phosphorylation of type I keratins on their caspase-mediated degradation J. Biol. Chem. 2001, 2276, 26792-26798
22. Oshima, R. G. Apoptosis and keratin intermediate filaments Cell Death Differ. 2001, 9, 486-492
23. Kawahara, A.; Enari, M.; Talanian, R. V.; Wong, W. W. Fas-induced DNA fragmentation and proteolysis of nuclear proteins Genes Cells 1998, 3, 297-306
24. Byun, Y.; Chen, F.; Chang, R.; Trivedi, M. Caspase cleavage of vimentin disrupts intermediate filaments and promotes apoptosis Cell Death Differ. 2001, 8, 443-450
25. Tsujimoto, Y. Cell death regulation by the Bcl-2 protein family in the mitochondria J. Cell. Physiol. 2003, 195, 158-167
26. Green, D. R.; Kroemer, G. The pathophysiology of mitochondrial cell death Science 2004, 305, 626-629
27. Nakagawa, T.; Shimizu, S.; Watanabe, T.; Yamaguchi, O. Cyclophilin D-dependent mitochondrial permeability transition regulates some necrotic but not apoptotic cell death Nature 2005, 434, 652-658
28. Rikova, K.; Guo, A.; Zeng, Q.; Possemato, A. Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer Cell 2007, 131, 1190-1203
29. Matsuoka, S.; Ballif, B. A.; Smogorzewska, A.; McDonald, E. R. ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage Science 2007, 316, 1160-1166