Metabolic Response to Iron Deficiency in Saccharomyces cerevisiae

Journal of Biological Chemistry

Volumn 285, Issue 19, 2010, Pages 14823-14833

  Shakoury Elizeh, Minoo ^a   Protchenko, Olga ^a   Berger, Alvin ^b,f   Cox, James ^c   Gable, Kenneth ^d   Dunn, Teresa M ^d   Prinz, William A ^a   Bard, Martin ^e   Philpott, Caroline C ^a  

^a NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES   (United States)

^b METABOLON INC   (United States)

^c UNIVERSITY OF UTAH   (United States)

^d UNIFORMED SERVICES UNIVERSITY OF THE HEALTH SCIENCES   (United States)

^e INDIANA UNIVERSITY   (United States)

^f CARGILL INC   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SYNTHESIS; BIOSYNTHETIC PATHWAY; CELLULAR MEMBRANES; CELLULAR METABOLISM; CELLULAR PROCESS; COFACTORS; DESATURASE; ESSENTIAL FATTY ACIDS; GLUCOSE METABOLISM; IRON AVAILABILITY; IRON DEFICIENCY; IRON DEPLETION; IRON-SULFUR PROTEINS; LIPID BIOSYNTHESIS; LIPID SYNTHESIS; METABOLIC PATHWAYS; METABOLOMES; OR FLUXES; SACCHAROMYCES CEREVISIAE; SPHINGOLIPIDS; TRANSCRIPTOMES; TRANSPORT ACTIVITY;

AMINO ACIDS; BIOCHEMISTRY; BIOSYNTHESIS; CATALYSTS; ENZYMES; FATTY ACIDS; GLUCOSE; ORGANIC ACIDS; PHYSIOLOGY; PORPHYRINS; SULFUR; YEAST;

METABOLISM;

ACYL COENZYME A DESATURASE 1; ERGOSTEROL; GLUCOSE; IRON; IRON SULFUR PROTEIN; SPHINGOLIPID; TRANSCRIPTOME;

AMINO ACID METABOLISM; AMINO ACID SYNTHESIS; ARTICLE; CELL MEMBRANE; CONTROLLED STUDY; ENZYME ACTIVITY; FUNGAL METABOLISM; GLUCOSE METABOLISM; IRON DEPLETION; LIPOGENESIS; NONHUMAN; PRIORITY JOURNAL; PROTEIN FUNCTION; SACCHAROMYCES CEREVISIAE;

BIOLOGICAL MARKERS; BLOTTING, WESTERN; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, FUNGAL; GENE REGULATORY NETWORKS; IMMUNOPRECIPITATION; IRON; METABOLOMICS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS;

SACCHAROMYCES CEREVISIAE;

EID: 77951996417     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M109.091710     Document Type: Article

References (51)

1. Zimmermann, M. B., and Hurrell, R. F. (2007) Lancet 370, 511-520
2. Beard, J. L. (2008) J. Nutr. 138, 2534-2536
3. Alla, V., and Bonkovsky, H. L. (2005) Semin. Liver Dis. 25, 461-472
4. De Domenico, I., McVey Ward, D., and Kaplan, J. (2008) Nat. Rev. Mol. Cell Biol. 9, 72-81
5. Lill, R., and Mühlenhoff, U. (2008) Annu. Rev. Biochem. 77, 669-700
6. Ozer, A., and Bruick, R. K. (2007) Nat. Chem. Biol. 3, 144-153
7. Paoli, M., Marles-Wright, J., and Smith, A. (2002) DNA Cell Biol. 21, 271-280
8. Puig, S., Askeland, E., and Thiele, D. J. (2005) Cell 120, 99-110
9. Shakoury-Elizeh, M., Tiedeman, J., Rashford, J., Ferea, T., Demeter, J., Garcia, E., Rolfes, R., Brown, P. O., Botstein, D., and Philpott, C. C. (2004) Mol. Biol. Cell 15, 1233-1243
10. Philpott, C. C., and Protchenko, O. (2008) Eukaryot. Cell 7, 20-27
11. Waldron, K. J., Rutherford, J. C., Ford, D., and Robinson, N. J. (2009) Nature 460, 823-830
12. Li, L., Bagley, D., Ward, D. M., and Kaplan, J. (2008) Mol. Cell. Biol. 28, 1326-1337
13. Protchenko, O., and Philpott, C. C. (2003) J. Biol. Chem. 278, 36582-36587
14. Puig, S., Vergara, S. V., and Thiele, D. J. (2008) Cell Metab. 7, 555-564
15. Protchenko, O., Shakoury-Elizeh, M., Keane, P., Storey, J., Androphy, R., and Philpott, C. C. (2008) Eukaryot. Cell 7, 859-871
16. Lawton, K. A., Berger, A., Mitchell, M., Milgram, K. E., Evans, A. M., Guo, L., Hanson, R. W., Kalhan, S. C., Ryals, J. A., and Milburn, M. V. (2008) Pharmacogenomics 9, 383-397
17. Sreekumar, A., Poisson, L. M., Rajendiran, T. M., Khan, A. P., Cao, Q., Yu, J., Laxman, B., Mehra, R., Lonigro, R. J., Li, Y., Nyati, M. K., Ahsan, A., Kalyana-Sundaram, S., Han, B., Cao, X., Byun, J., Omenn, G. S., Ghosh, D., Pennathur, S., Alexander, D. C., Berger, A., Shuster, J. R., Wei, J. T., Varambally, S., Beecher, C., and Chinnaiyan, A. M. (2009) Nature 457, 910-914
18. Katajamaa, M., and Oresic, M. (2005) BMC Bioinformatics 6, 179
19. Parrou, J. L., and François, J. (1997) Anal. Biochem. 248, 186-188
20. Kennedy, M. A., and Bard, M. (2001) Biochim. Biophys. Acta 1517, 177-189
21. Hanover, J. A., Forsythe, M. E., Hennessey, P. T., Brodigan, T. M., Love, D. C., Ashwell, G., and Krause, M. (2005) Proc. Natl. Acad. Sci. U.S.A. 102, 11266-11271
22. Bertello, L. E., Gonçalvez, M. F., Colli, W., and de Lederkremer, R. M. (1995) Biochem. J. 310, 255-261
23. Hung, C. Y., Ko, Y. G., and Thompson, G. A., Jr. (1995) Biochem. J. 307, 107-113
24. Lester, R. L., and Dickson, R. C. (2001) Anal. Biochem. 298, 283-292
25. Stehling, O., Smith, P. M., Biederbick, A., Balk, J., Lill, R., and Mühlenhoff, U. (2007) in Mitochondria: Practical Protocols (Leister, D., and Herrmann, J. M., eds) pp. 325-342, Springer, New York
26. Dancis, A., Klausner, R. D., Hinnebusch, A. G., and Barriocanal, J. G. (1990) Mol. Cell. Biol. 10, 2294-2301
27. Deng, Y., Guo, Y., Watson, H., Au, W. C., Shakoury-Elizeh, M., Basrai, M. A., Bonifacino, J. S., and Philpott, C. C. (2009) J. Biol. Chem. 284, 23830-23841
28. Lagunas, R. (1986) Yeast 2, 221-228
29. Lesuisse, E., Santos, R., Matzanke, B. F., Knight, S. A., Camadro, J. M., and Dancis, A. (2003) Hum. Mol. Genet. 12, 879-889
30. Magasanik, B. (1992) in The Molecular and Cellular Biology of the Yeast Saccharomyces (Jones, E. W., Pringle, J. R., and Broach, J. R., eds) pp. 283-317, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
31. Magasanik, B., and Kaiser, C. A. (2002) Gene 290, 1-18
32. Kohlhaw, G. B. (2003) Microbiol. Mol. Biol. Rev. 67, 1-15
33. Daum, G., Lees, N. D., Bard, M., and Dickson, R. (1998) Yeast 14, 1471-1510
34. Espenshade, P. J., and Hughes, A. L. (2007) Annu. Rev. Genet. 41, 401-427
35. Lees, N. D., and Bard, M. (2003) in Lipid Metabolism and Membrane Biogenesis (Daum, G., ed) pp. 213-240, Springer-Verlag, Heidelberg
36. Hughes, A. L., Powell, D. W., Bard, M., Eckstein, J., Barbuch, R., Link, A. J., and Espenshade, P. J. (2007) Cell Metab. 5, 143-149
37. Mallory, J. C., Crudden, G., Johnson, B. L., Mo, C., Pierson, C. A., Bard, M., and Craven, R. J. (2005) Mol. Cell. Biol. 25, 1669-1679
38. Dancis, A., Roman, D. G., Anderson, G. J., Hinnebusch, A. G., and Klausner, R. D. (1992) Proc. Natl. Acad. Sci. U.S.A. 89, 3869-3873
39. M'Baya, B., Fegueur, M., Servouse, M., and Karst, F. (1989) Lipids 24, 1020-1023
40. Polakowski, T., Stahl, U., and Lang, C. (1998) Appl. Microbiol. Biotechnol. 49, 66-71
41. Müllner, H., Zweytick, D., Leber, R., Turnowsky, F., and Daum, G. (2004) Biochim. Biophys. Acta 1663, 9-13
42. Leber, R., Landl, K., Zinser, E., Ahorn, H., Spök, A., Kohlwein, S. D., Turnowsky, F., and Daum, G. (1998) Mol. Biol. Cell 9, 375-386
43. Haak, D., Gable, K., Beeler, T., and Dunn, T. (1997) J. Biol. Chem. 272, 29704-29710
44. Dunn, T. M., Haak, D., Monaghan, E., and Beeler, T. J. (1998) Yeast 14, 311-321
45. Bagnat, M., and Simons, K. (2002) Biol. Chem. 383, 1475-1480
46. Dickson, R. C. (2008) J. Lipid Res. 49, 909-921
47. Prasad, T., Chandra, A., Mukhopadhyay, C. K., and Prasad, R. (2006) Antimicrob. Agents Chemother. 50, 3597-3606
48. Umebayashi, K., and Nakano, A. (2003) J. Cell Biol. 161, 1117-1131
49. Ghaemmaghami, S., Huh, W. K., Bower, K., Howson, R. W., Belle, A., Dephoure, N., O'Shea, E. K., and Weissman, J. S. (2003) Nature 425, 737-741
50. Craven, R. J., Mallory, J. C., and Hand, R. A. (2007) J. Biol. Chem. 282, 36543-36551
51. Macomber, L., and Imlay, J. A. (2009) Proc. Natl. Acad. Sci. U.S.A. 106, 8344-8349