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Volumn 26, Issue 6, 2010, Pages 845-846

FineStr: A web server for single-base-resolution nucleosome positioning

Author keywords

[No Author keywords available]

Indexed keywords

CAENORHABDITIS ELEGANS; EUKARYOTA;

EID: 77951944594     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btq030     Document Type: Article
Times cited : (28)

References (10)
  • 1
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    • Topography of the histone octamer surface - repeating structural motifs utilized in the docking of nucleosomal DNA
    • Arents,G. and Moudrianakis,E.N. (1993) Topography of the histone octamer surface - repeating structural motifs utilized in the docking of nucleosomal DNA. Proc. Natl Acad. Sci. USA, 90, 10489-10493.
    • (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 10489-10493
    • Arents, G.1    Moudrianakis, E.N.2
  • 2
    • 33746793264 scopus 로고    scopus 로고
    • Nucleosome core particles containing a poly(dA·dT) sequence element exhibit a locally distorted DNA structure
    • Bao,Y. et al. (2006) Nucleosome core particles containing a poly(dA·dT) sequence element exhibit a locally distorted DNA structure. J. Mol. Biol., 361, 617-624.
    • (2006) J. Mol. Biol. , vol.361 , pp. 617-624
    • Bao, Y.1
  • 3
    • 0036307707 scopus 로고    scopus 로고
    • Solvent mediated interactions in the structure of the nucleosome core particle at 1.9A resolution
    • Davey,C.A. et al. (2002) Solvent mediated interactions in the structure of the nucleosome core particle at 1.9A resolution. J. Mol. Biol., 319, 1097-1113.
    • (2002) J. Mol. Biol. , vol.319 , pp. 1097-1113
    • Davey, C.A.1
  • 4
    • 60849116141 scopus 로고    scopus 로고
    • Nucleosome DNA bendability matrix (C. elegans)
    • Gabdank,I. et al. (2009) Nucleosome DNA bendability matrix (C. elegans). J. Biomol. Str. Dyn., 26, 403-412.
    • (2009) J. Biomol. Str. Dyn. , vol.26 , pp. 403-412
    • Gabdank, I.1
  • 5
    • 0034522793 scopus 로고    scopus 로고
    • Asymmetries in the nucleosome core particle at 2.5 angstrom resolution
    • Harp,J.M. et al. (2000) Asymmetries in the nucleosome core particle at 2.5 angstrom resolution. Acta Crystallogr., 56, 1513-1534.
    • (2000) Acta Crystallogr. , vol.56 , pp. 1513-1534
    • Harp, J.M.1
  • 6
    • 33845298285 scopus 로고    scopus 로고
    • Flexibility and constraint in the nucleosome core landscape of Caenorhabditis elegans chromatin
    • Johnson,S.M. et al. (2006) Flexibility and constraint in the nucleosome core landscape of Caenorhabditis elegans chromatin. Genome Res., 16, 1505-1516.
    • (2006) Genome Res. , vol.16 , pp. 1505-1516
    • Johnson, S.M.1
  • 7
    • 1842411320 scopus 로고    scopus 로고
    • Crystal structure of the nucleosome core particle at 2.8A resolution.
    • Luger,K. et al. (1997) Crystal structure of the nucleosome core particle at 2.8A resolution. Nature, 389, 251-260.
    • (1997) Nature , vol.389 , pp. 251-260
    • Luger, K.1
  • 8
    • 34147191973 scopus 로고    scopus 로고
    • DNA stretching and extreme kinking in the nucleosome core
    • Ong,M.S. et al. (2007) DNA stretching and extreme kinking in the nucleosome core. J. Mol. Biol., 368, 1067-1074.
    • (2007) J. Mol. Biol. , vol.368 , pp. 1067-1074
    • Ong, M.S.1
  • 9
    • 77951963718 scopus 로고    scopus 로고
    • Base pair stacking in nucleosome DNA and bendability sequence pattern
    • in press
    • Trifonov,E.N. (2009) Base pair stacking in nucleosome DNA and bendability sequence pattern. J. Theor. Biol., in press
    • (2009) J. Theor. Biol.
    • Trifonov, E.N.1
  • 10
    • 77951969370 scopus 로고    scopus 로고
    • Nucleosome positioning by sequence, state of the art and apparent finale
    • in press
    • Trifonov,E.N. (2010) Nucleosome positioning by sequence, state of the art and apparent finale. J. Biomol. Str. Dyn., in press
    • (2010) J. Biomol. Str. Dyn.
    • Trifonov, E.N.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.