메뉴 건너뛰기




Volumn 49, Issue 17, 2010, Pages 3517-3524

X-ray structure of KijD3, a key enzyme involved in the biosynthesis of d-kijanose

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVE SITE; ACTIVITY ASSAYS; ACYL-COA; AMINO ACID SEQUENCE; D-GLUCOSE; HELICAL BUNDLE; IN-VITRO; IN-VIVO; KEY ENZYMES; MOLECULAR ARCHITECTURE; OXIDOREDUCTASES; PEPTIDE BONDS; SIDE CHAINS; SOIL-DWELLING; STRUCTURAL STUDIES; TETRAMERS; X-RAY STRUCTURE;

EID: 77951673942     PISSN: 00062960     EISSN: 15204995     Source Type: Journal    
DOI: 10.1021/bi100318v     Document Type: Article
Times cited : (30)

References (33)
  • 3
    • 0027202811 scopus 로고
    • Genetics of lipopolysaccharide biosynthesis in enteric bacteria
    • Schnaitman, C. A. and Klena, J. D. (1993) Genetics of lipopolysaccharide biosynthesis in enteric bacteria Microbiol. Rev. 57, 655-682
    • (1993) Microbiol. Rev. , vol.57 , pp. 655-682
    • Schnaitman, C.A.1    Klena, J.D.2
  • 6
    • 3843086796 scopus 로고    scopus 로고
    • Genes and enzymes involved in deoxysugar biosynthesis in bacteria
    • Trefzer, A., Salas, J. A., and Bechthold, A. (1999) Genes and enzymes involved in deoxysugar biosynthesis in bacteria Nat. Prod. Rep. 16, 283-299
    • (1999) Nat. Prod. Rep. , vol.16 , pp. 283-299
    • Trefzer, A.1    Salas, J.A.2    Bechthold, A.3
  • 8
    • 0019799763 scopus 로고
    • Kijanimicin (Sch 25663), a novel antibiotic produced by Actinomadura kijaniata SCC 1256. Fermentation, isolation, characterization and biological properties
    • Waitz, J. A., Horan, A. C., Kalyanpur, M., Lee, B. K., Loebenberg, D., Marquez, J. A., Miller, G., and Patel, M. G. (1981) Kijanimicin (Sch 25663), a novel antibiotic produced by Actinomadura kijaniata SCC 1256. Fermentation, isolation, characterization and biological properties J. Antibiot. (Tokyo) 34, 1101-1106
    • (1981) J. Antibiot. (Tokyo) , vol.34 , pp. 1101-1106
    • Waitz, J.A.1    Horan, A.C.2    Kalyanpur, M.3    Lee, B.K.4    Loebenberg, D.5    Marquez, J.A.6    Miller, G.7    Patel, M.G.8
  • 10
    • 2642566088 scopus 로고    scopus 로고
    • Anthracyclines: Molecular advances and pharmacologic developments in antitumor activity and cardiotoxicity
    • Minotti, G., Menna, P., Salvatorelli, E., Cairo, G., and Gianni, L. (2004) Anthracyclines: molecular advances and pharmacologic developments in antitumor activity and cardiotoxicity Pharmacol. Rev. 56, 185-229
    • (2004) Pharmacol. Rev. , vol.56 , pp. 185-229
    • Minotti, G.1    Menna, P.2    Salvatorelli, E.3    Cairo, G.4    Gianni, L.5
  • 12
    • 0028304459 scopus 로고
    • Influence of structural modifications at the 3′ and 4′ positions of doxorubicin on the drug ability to trap topoisomerase II and to overcome multidrug resistance
    • Capranico, G., Supino, R., Binaschi, M., Capolongo, L., Grandi, M., Suarato, A., and Zunino, F. (1994) Influence of structural modifications at the 3′ and 4′ positions of doxorubicin on the drug ability to trap topoisomerase II and to overcome multidrug resistance Mol. Pharmacol. 45, 908-915
    • (1994) Mol. Pharmacol. , vol.45 , pp. 908-915
    • Capranico, G.1    Supino, R.2    Binaschi, M.3    Capolongo, L.4    Grandi, M.5    Suarato, A.6    Zunino, F.7
  • 13
    • 27544456829 scopus 로고    scopus 로고
    • Syntheses and biological activities of daunorubicin analogs with uncommon sugars
    • DOI 10.1016/j.bmc.2005.06.053, PII S0968089605005894
    • Zhu, L., Cao, X., Chen, W., Zhang, G., Sun, D., and Wang, P. G. (2005) Syntheses and biological activities of daunorubicin analogs with uncommon sugars Bioorg. Med. Chem. 13, 6381-6387 (Pubitemid 41539302)
    • (2005) Bioorganic and Medicinal Chemistry , vol.13 , Issue.23 , pp. 6381-6387
    • Zhu, L.1    Cao, X.2    Chen, W.3    Zhang, G.4    Sun, D.5    Wang, P.G.6
  • 14
    • 49949152431 scopus 로고    scopus 로고
    • Increasing carbohydrate diversity via amine oxidation: Aminosugar, hydroxyaminosugar, nitrososugar, and nitrosugar biosynthesis in bacteria
    • Timmons, S. C. and Thorson, J. S. (2008) Increasing carbohydrate diversity via amine oxidation: aminosugar, hydroxyaminosugar, nitrososugar, and nitrosugar biosynthesis in bacteria Curr. Opin. Chem. Biol. 12, 297-305
    • (2008) Curr. Opin. Chem. Biol. , vol.12 , pp. 297-305
    • Timmons, S.C.1    Thorson, J.S.2
  • 15
    • 36749055680 scopus 로고    scopus 로고
    • Elucidation of the kijanimicin gene cluster: Insights into the biosynthesis of spirotetronate antibiotics and nitrosugars
    • Zhang, H., White-Phillip, J. A., Melancon, C. E., 3rd, Kwon, H. J., Yu, W. L., and Liu, H. W. (2007) Elucidation of the kijanimicin gene cluster: insights into the biosynthesis of spirotetronate antibiotics and nitrosugars J. Am. Chem. Soc. 129, 14670-14683
    • (2007) J. Am. Chem. Soc. , vol.129 , pp. 14670-14683
    • Zhang, H.1    White-Phillip, J.A.2    Melancon III, C.E.3    Kwon, H.J.4    Yu, W.L.5    Liu, H.W.6
  • 17
    • 0035669434 scopus 로고    scopus 로고
    • Characterization of the biosynthetic gene cluster for the oligosaccharide antibiotic, Evernimicin, in Micromonospora carbonacea var. africana ATCC39149
    • Hosted, T. J., Wang, T. X., Alexander, D. C., and Horan, A. C. (2001) Characterization of the biosynthetic gene cluster for the oligosaccharide antibiotic, Evernimicin, in Micromonospora carbonacea var. africana ATCC39149 J. Ind. Microbiol. Biotechnol. 27, 386-392
    • (2001) J. Ind. Microbiol. Biotechnol. , vol.27 , pp. 386-392
    • Hosted, T.J.1    Wang, T.X.2    Alexander, D.C.3    Horan, A.C.4
  • 18
    • 50249101630 scopus 로고    scopus 로고
    • Cloning and characterization of the tetrocarcin A gene cluster from Micromonospora chalcea NRRL 11289 reveals a highly conserved strategy for tetronate biosynthesis in spirotetronate antibiotics
    • Fang, J., Zhang, Y., Huang, L., Jia, X., Zhang, Q., Zhang, X., Tang, G., and Liu, W. (2008) Cloning and characterization of the tetrocarcin A gene cluster from Micromonospora chalcea NRRL 11289 reveals a highly conserved strategy for tetronate biosynthesis in spirotetronate antibiotics J. Bacteriol. 190, 6014-6025
    • (2008) J. Bacteriol. , vol.190 , pp. 6014-6025
    • Fang, J.1    Zhang, Y.2    Huang, L.3    Jia, X.4    Zhang, Q.5    Zhang, X.6    Tang, G.7    Liu, W.8
  • 20
    • 0029040665 scopus 로고
    • Structure and mechanism of action of the acyl-CoA dehydrogenases
    • Thorpe, C. and Kim, J. J. (1995) Structure and mechanism of action of the acyl-CoA dehydrogenases FASEB J. 9, 718-725
    • (1995) FASEB J. , vol.9 , pp. 718-725
    • Thorpe, C.1    Kim, J.J.2
  • 21
    • 0842265784 scopus 로고    scopus 로고
    • Acyl-CoA dehydrogenases and acyl-CoA oxidases. Structural basis for mechanistic similarities and differences
    • Kim, J. J. and Miura, R. (2004) Acyl-CoA dehydrogenases and acyl-CoA oxidases. Structural basis for mechanistic similarities and differences Eur. J. Biochem. 271, 483-493
    • (2004) Eur. J. Biochem. , vol.271 , pp. 483-493
    • Kim, J.J.1    Miura, R.2
  • 22
    • 15744370513 scopus 로고    scopus 로고
    • Molecular structure of human galactokinase: Implications for Type II galactosemia
    • Thoden, J. B., Timson, D. J., Reece, R. J., and Holden, H. M. (2005) Molecular structure of human galactokinase: implications for Type II galactosemia J. Biol. Chem. 280, 9662-9670
    • (2005) J. Biol. Chem. , vol.280 , pp. 9662-9670
    • Thoden, J.B.1    Timson, D.J.2    Reece, R.J.3    Holden, H.M.4
  • 25
    • 0037237545 scopus 로고    scopus 로고
    • Automated main-chain model building by template matching and iterative fragment extension
    • Terwilliger, T. C. (2003) Automated main-chain model building by template matching and iterative fragment extension Acta Crystallogr. D Biol. Crystallogr. 59, 38-44
    • (2003) Acta Crystallogr. D Biol. Crystallogr. , vol.59 , pp. 38-44
    • Terwilliger, T.C.1
  • 29
    • 0026471926 scopus 로고
    • Protorubradirin, an antibiotic containing a C-nitroso-sugar fragment, is the true secondary metabolite produced by Streptomyces achromogenes var. rubradiris. Rubradirin, described earlier, is its photo-oxidation product
    • Bannister, B. and Zapotocky, B. A. (1992) Protorubradirin, an antibiotic containing a C-nitroso-sugar fragment, is the true secondary metabolite produced by Streptomyces achromogenes var. rubradiris. Rubradirin, described earlier, is its photo-oxidation product J. Antibiot. (Tokyo) 45, 1313-1324
    • (1992) J. Antibiot. (Tokyo) , vol.45 , pp. 1313-1324
    • Bannister, B.1    Zapotocky, B.A.2
  • 30
    • 13444307044 scopus 로고    scopus 로고
    • Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions
    • Krissinel, E. and Henrick, K. (2004) Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions Acta Crystallogr. D Biol. Crystallogr. 60, 2256-2268
    • (2004) Acta Crystallogr. D Biol. Crystallogr. , vol.60 , pp. 2256-2268
    • Krissinel, E.1    Henrick, K.2
  • 31
    • 1942533442 scopus 로고    scopus 로고
    • Structures of isobutyryl-CoA dehydrogenase and enzyme-product complex: Comparison with isovaleryl- and short-chain acyl-CoA dehydrogenases
    • Battaile, K. P., Nguyen, T. V., Vockley, J., and Kim, J. J. (2004) Structures of isobutyryl-CoA dehydrogenase and enzyme-product complex: comparison with isovaleryl- and short-chain acyl-CoA dehydrogenases J. Biol. Chem. 279, 16526-16534
    • (2004) J. Biol. Chem. , vol.279 , pp. 16526-16534
    • Battaile, K.P.1    Nguyen, T.V.2    Vockley, J.3    Kim, J.J.4
  • 32
    • 0027169515 scopus 로고
    • Main-chain bond lengths and bond angles in protein structures
    • Laskowski, R. A., Moss, D. S., and Thornton, J. M. (1993) Main-chain bond lengths and bond angles in protein structures J. Mol. Biol. 231, 1049-1067
    • (1993) J. Mol. Biol. , vol.231 , pp. 1049-1067
    • Laskowski, R.A.1    Moss, D.S.2    Thornton, J.M.3
  • 33
    • 0003845223 scopus 로고    scopus 로고
    • The PyMOL molecular graphics system
    • DeLano Scientific, San Carlos, CA, USA
    • DeLano, W. L. (2002) The PyMOL Molecular Graphics System. DeLano Scientific, San Carlos, CA, USA, The PyMOL Molecular Graphics System.
    • (2002) The PyMOL Molecular Graphics System
    • Delano, W.L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.