Chemical composition of lipopolysaccharides isolated from various endophytic nitrogen-fixing bacteria of the genus Herbaspirillum

Canadian Journal of Microbiology

Volumn 56, Issue 4, 2010, Pages 342-347

  Serrato, R V ^a   Sassaki, G L ^a   Cruz, L M ^a   Carlson, R W ^b   Muszynski A ^b   Monteiro, R A ^a   Pedrosa, F O ^a   Souza, E M ^a   Iacomini, M ^a  

^a FEDERAL UNIVERSITY OF PARANÁ   (Brazil)

^b UNIVERSITY OF GEORGIA   (United States)

Author keywords

Diazotrophic bacteria; Herbaspirillum; Lipopolysaccharide; LPS

Indexed keywords

AQUEOUS EXTRACTS; CHEMICAL COMPOSITIONS; DIAZOTROPHIC BACTERIA; ECONOMIC IMPORTANCE; GRAM-NEGATIVE BACTERIA; LIPOPOLYSACCHARIDES; MOLECULAR COMMUNICATION; NITROGEN FIXING BACTERIA; OUTER MEMBRANE; PLANT GROWTH; PLANT PATHOGEN; WATER EXTRACTION;

BACTERIA; BACTERIOLOGY; CHEMICALS REMOVAL (WATER TREATMENT); PHENOLS; PLANT LIFE EXTENSION; SOLVENT EXTRACTION;

NITROGEN FIXATION;

GALACTOSE; GLUCOSE; HEPTOSE; LAURIC ACID; LIPOPOLYSACCHARIDE; MYRISTIC ACID; N ACETYLGLUCOSAMINE; PALMITIC ACID; PHENOL; RHAMNOSE;

AQUEOUS SOLUTION; CHEMICAL COMPOSITION; ELECTROKINESIS; ENDOPHYTE; MEMBRANE; NITRIFYING BACTERIUM; PHENOL; POLYSACCHARIDE;

ARTICLE; CHEMICAL COMPOSITION; ELECTROPHORESIS; HERBASPIRILLUM; HERBASPIRILLUM RUBRISUBALBICANS; HERBASPIRILLUM SEROPEDICAE; NITROGEN FIXATION; NONHUMAN; OUTER MEMBRANE; PLANT GROWTH; PRIORITY JOURNAL;

HERBASPIRILLUM; LIPOPOLYSACCHARIDES; NITROGEN FIXATION; POACEAE;

HERBASPIRILLUM; HERBASPIRILLUM RUBRISUBALBICANS; HERBASPIRILLUM SEROPEDICAE; NEGIBACTERIA; TRITICUM AESTIVUM; ZEA MAYS;

EID: 77951660307     PISSN: 00084166     EISSN: None     Source Type: Journal    
DOI: 10.1139/W10-011     Document Type: Article

References (42)

1. Anderson, A.J. 1984. Differences between lipopolysaccharides compositions of plant pathogenic and saprophytic Pseudomonas species. Appl. Environ. Microbiol. 48(1): 31-35. PMID: 16346597.
2. Baldani, J.I., and Baldani, V.L.D. 2005. History of biological nitrogen fixation research in graminaceous plants: special emphasis on the Brazilian experience. Ann. Brazil Acad. Sci. 77(3): 549-579.
3. Baldani, J.I., Baldani, V.L.D., Seldin, L., and Döbereiner, J. 1986. Characterization of Herbaspirillum seropedicae gen. nov. sp. nov.: a root-associated nitrogen-fixing bacterium. Int. J. Syst. Bacteriol. 36: 86-93.
4. Baldani, V.L.D., Baldani, J.I., Olivares, F.L., and Döbereiner, J. 1992. Identification and ecology of Herbaspirillum seropedicae and closely related Pseudomonas rubrisubalbicans. Symbiosis, 13: 65-73.
5. Baldani, J.I., Pot, B., Kirchhof, G., Falsen, E., Baldani, V.L.D., Olivares, F.L., et al. 1996. Emended description of Herbaspirillum; inclusion of [Pseudomonas] rubrisubalbicans, a milk plant pathogen, as Herbaspirillum rubrisubalbicans comb. nov.; and classification of a group of clinical isolates (EF group 1) as Herbaspirillum species 3. Int. J. Syst. Bacteriol. 46(3): 802-810. PMID:8782693. (Pubitemid 26231302)
6. Bittel, P., and Robatzek, S. 2007. Microbe-associated molecular patterns (MAMPs) probe plant immunity. Curr. Opin. Plant Biol. 10(4): 335-341. doi:10.1016/j.pbi.2007.04.021. PMID: 17652011.
7. Carlson, R.W., Reuhs, B., Chen, T.B., Bhat, U.R., and Noel, K.D. 1995. Lipopolysaccharide core structures in Rhizobium etli and mutants deficient in O-antigen. J. Biol. Chem. 270(20): 11783-11788. doi:10.1074/jbc.270.20.11783. PMID:7538123.
8. Christopher, W.N., and Edgerton, C.W. 1932. Bacterial stripe diseases of sugarcane in Louisiana. J. Agric. Res. 41: 259-267.
9. Corzo,J.,Pérez-Galdona,R.,León-Barrios,M., andGutiérrez-Navarro, A.M. 1991. Alcian blue fixation allows silver staining of the isolated polysaccharide component of bacterial lipopolysaccharides in polyacrylamide gels. Electrophoresis, 12(6): 439-441. doi:10.1002/elps.1150120611. PMID:1716199.
10. D'Haeze, W., Leoff, C., Freshour, G., Noel, K.D., and Carlson, R.W. 2007. Rhizobium etli CE3 bacteroid lipopolysaccharides are structurally similar but not identical to those produced by cultured CE3 bacteria. J. Biol. Chem. 282(23): 17101-17113. doi:10.1074/jbc.M611669200. PMID:17420254.
11. De Castro, C., Molinaro, A., Lanzetta, R., Silipo, A., and Parrilli, M. 2008. Lipopolysaccharide structures from Agrobacterium and Rhizobiaceae species. Carbohydr. Res. 343(12): 1924-1933. doi:10.1016/j.carres.2008.01.036. PMID:18353297.
12. Döbereiner, J. 1992. History and new perspective of diazotrophs in association with non-leguminous plants. Symbiosis, 13: 1-13.
13. Elbeltagy, A., Nishioka, K., Sato, T., Suzuki, H., Ye, B., Hamada, T., et al. 2001. Endophytic colonization and in planta nitrogen fixation by a Herbaspirillum sp. isolated from wild rice species. Appl. Environ. Microbiol. 67(11): 5285-5293. doi:10.1128/AEM.67.11.5285-5293.2001. PMID:11679357.
14. Eyers, M., Vanderleyden, J., and Van Gool, A. 1988. Attachment of Azospirillum to isolated plant cells. FEMS Microbiol. Lett. 49(3): 435-439. doi:10.1111/j.1574-6968.1988.tb02771.x.
15. Gillis, M., Döbereiner, J., Pot, B., Goor, M., Falsen, E., Hoste, B., et al. 1991. Taxonomy relationship between Pseudomonas rubrisubalbicans, some clinical isolates (EF group 1), Herbaspirillum seropedicae and Aquaspirillum autotrophicus. In Nitrogen fixation. Edited by M. Polsinelli, R. Matereassi, and M. Vicenzini. Kluwer Academic Publishers, Dordrecht, Netherlands. pp. 292-294.
16. Goosen-de Roo, L., de Maagd, R.A., and Lugtenberg, B.J. 1991. Antigenic changes in lipopolysaccharide I of Rhizobium leguminosarum bv. viciae in root nodules of Vicia sativa subsp. nigra occur during release from infection threads. J. Bacteriol. 173(10): 3177-3183. PMID:1708764.
17. Hale, C.N., and Wilkie, J.P. 1972. A comparative study of Pseudomonas species pathogenic to sorghum. J. Agric. Res. 15: 448-456.
18. James, E.K., and Olivares, F.L. 1998. Infection and colonization of sugar cane and other graminaceous plants by endophytic diazotrophs. Crit. Rev. Plant Sci. 17(1): 77-119. doi:10.1016/S0735-2689(98)00357-8.
19. Kannenberg, E.L., and Carlson, R.W. 2001. Lipid A and O-chain modifications cause Rhizobium lipopolysaccharides to become hydrophobic during bacteroid development. Mol. Microbiol. 39(2): 379-391. doi:10.1046/j.1365-2958. 2001.02225.x. PMID: 11136459.
20. Kannenberg, E.L., Reuhs, B.L., Forsberg, L.S., and Carlson, R.W. 1998. Lipopolysaccharides and K-antigens: their structure, biosynthesis and functions. In The Rhizobiaceae. Edited by H.P. Spaink, A. Kondorosi, and P.J.J. Honykaas. Kluwer Academic Publishers, Dordrecht, Netherlands. pp. 119-154.
21. Komuro, T., and Galanos, C. 1988. Analysis of Salmonella lipopolysaccharides by sodium deoxycholate - polyacrylamide gel electrophoresis. J. Chromatogr. A, 450(3): 381-387. doi:10. 1016/S0021-9673(01)83593-83597
22. Krieg, N.R., and Holt, J.G. 1984. Bergey's manual of systematic bacteriology. Vol. 1. Edited by D.R. Boone. Williams and Wilkins, Baltimore, Md.
23. Magalhães Cruz, L., de Souza, E.M., Weber, O.B., Baldani, J.I., Döbereiner, J., and Pedrosa, F.O. 2001. 16S ribosomal DNA characterization of nitrogen-fixing bacteria isolated from banana (Musa spp.) and pineapple (Ananas comosus (L.) Merril). Appl. Environ. Microbiol. 67(5): 2375-2379. doi:10.1128/AEM.67.5. 2375-2379.2001. PMID:11319127.
24. Matthysse, A.G. 1986. Initial interactions of Agrobacterium tumefaciens with plant host cells. Crit. Rev. Microbiol. 13(3): 281-307. doi:10.3109/10408418609108740. PMID:3533427.
25. Metts, J., West, J., Doares, S.H., and Matthysse, A.G. 1991. Characterization of three Agrobacterium tumefaciens avirulent mutants with chromosomal mutations that affect induction of vir genes. J. Bacteriol. 173(3): 1080-1087. PMID:1846853.
26. Noel, K.D., and Duelli, D.M. 2000. Rhizobium lipopolysaccharide and its role in symbiosis. In Prokaryotic nitrogen fixation: a model system for analysis of a biological process. Edited by E.W. Triplett. Horizon Scientific Press, Wymondham, UK. pp. 415-431.
27. Noel, K.D., Forsberg, L.S., and Carlson, R.W. 2000. Varying the abundance of O antigen in Rhizobium etli and its effect on symbiosis with Phaseolus vulgaris. J. Bacteriol. 182(19): 5317-5324. doi:10.1128/JB.182.19.5317-5324. 2000. PMID:10986232.
28. Olivares, F.L., Baldani, V.L.D., Reis, V.M., Baldani, J.I., and Döbereiner, J. 1996. Occurrence of endophytic diazotrophs Herbaspirillum spp. in roots, stems and leaves predominantly of Gramineae. Biol. Fertil. Soils, 21: 197-200. doi:10.1007/BF00335935.
29. Pedrosa, F.O., and Yates, M.G. 1984. Regulation of nitrogen fixation (nif) genes of Azospirillum brasilense by nif A and ntr (gln) type gene products. FEMS Microbiol. Lett. 23(1): 95-101. doi:10.1111/j.1574-6968.1984. tb01042.x.
30. Pedrosa, F.O., Teixeira, K.R.S., Machado, I.M.P., Steffens, M.B.R., Klassen, G., Benelli, E.M., et al. 1997. Structural organization and regulation of the nif genes of Herbaspirillum seropedicae. Soil Biol. Biochem. 29(5-6): 843-846. doi:10.1016/S0038- 0717(96)00206-214
31. Pimentel, J.P., Olivares, F.L., Pitard, R.M., Urquiaga, S., Akiba, F., and Döbereiner, J. 1991. Dinitrogen fixation and infection of grass leaves by Pseudomonas rubrisubalbicans and Herbaspirillum seropedicae. Plant Soil, 137(1): 61-65. doi:10.1007/ BF02187433.
32. Pueppke, S.G. 1984. Adsorption of bacteria to plant surfaces. In Plant-microbe interactions. Edited by T. Kosuge and E.W. Nester. MacMillan, New York, N.Y. pp. 215-261.
33. Raetz, C.R.H., and Whitfield, C. 2002. Lipopolysaccharide endotoxins. Annu. Rev. Biochem. 71(1): 635-700. doi:10.1146/annurev.biochem.71.110601. 135414. PMID:12045108.
34. Raetz, C.R.H., Reynolds, C.M., Trent, M.S., and Bishop, R.E. 2007. Lipid A modification systems in gram-negative bacteria. Annu. Rev. Biochem. 76(1): 295-329. doi:10.1146/annurev. biochem.76.010307.145803. PMID:17362200.
35. Reuhs, B.L., Stephens, S.B., Geller, D.P., Kim, J.S., Glenn, J., Przytycki, J., and Ojanen-Reuhs, T. 1999. Epitope identification for a panel of anti-Sinorhizobium meliloti monoclonal antibodies and application to the analysis of K antigens and lipopolysaccharides from bacteroids. Appl. Environ. Microbiol. 65(11): 5186-5191. PMID:10543844.
36. Ridley, B.L. 2000. Plant cell wall and bacterial cell surface polysaccharides in plant-microbe interactions: the role of oligogalacturonides and lipopolysaccharides. Ph.D. thesis, University of Georgia, Athens, Ga.
37. Roncato-Maccari, L.D.B., Ramos, H.J.O., Pedrosa, F.O., Alquini, Y., Chubatsu, L.S., Yates, M.G., et al. 2003. Endophytic Herbaspirillum seropedicae expresses nif genes in gramineous plants. FEMS Microbiol. Ecol. 45(1): 39-47. doi:10.1016/S0168-6496(03)00108-9. PMID:19719605.
38. Smith, A.R.W., Munro, S.M., Wait, R., and Hignett, R.C. 1994. Effect on lipopolysaccharide structure of aeration during growth of a plum isolate of Pseudomonas syringae pv. morsprunorum. Microbiology, 140(Pt 7): 1585-1593. doi:10.1099/13500872-140-7-1585. PMID:8075800. (Pubitemid 24231146)
39. Soares-Ramos, J.R.L., Ramos, H.J.O., Cruz, L.M., Chubatsu, L.S., Pedrosa, F.O., Rigo, L.U., and Souza, E.M. 2003. Comparative molecular analysis of Herbaspirillum strain by RAPD, RFLP, and 16S rDNA sequencing. Genet. Mol. Biol. 26(4): 537-543. doi:10.1590/S1415-47572003000400019.
40. Tsai, C.M., and Frasch, C.E. 1982. A sensitive silver stain for detecting lipopolysaccharides in polyacrylamide gels. Anal. Biochem. 119(1): 115-119. doi:10.1016/0003-2697(82)90673-X. PMID:6176137.
41. Weber, O.B., Baldani, V.L.D., Teixeira, K.R.S., Kirchhof, G., Baldani, J.I., and Döbereiner, J. 1999. Isolation and characterization of diazotrophic bacteria in banana and pineapple plants. Plant Soil, 210(1): 103-113. doi:10.1023/A:1004623523179. (Pubitemid 29461718)
42. Westphal, O., and Jann, K. 1965. Bacterial lipopolysaccharides: extraction with phenol-water and further applications of the procedure. Methods Carbohydr. Chem. 5: 83-91.