메뉴 건너뛰기




Volumn 59, Issue 5, 2010, Pages 556-562

Typing of Clostridium difficile isolates endemic in Japan by sequencing of slpA and its application to direct typing

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN A; TOXIC SUBSTANCE; BACTERIAL DNA; BACTERIAL PROTEIN; SURFACE LAYER PROTEIN A, BACTERIA;

EID: 77951642332     PISSN: 00222615     EISSN: None     Source Type: Journal    
DOI: 10.1099/jmm.0.016147-0     Document Type: Article
Times cited : (41)

References (28)
  • 1
    • 35048865459 scopus 로고    scopus 로고
    • Prospective study of Clostridium difficile infections in Europe with phenotypic and genotypic characterisation of the isolates
    • Barbut, F., Mastrantonio, P., Delmee, M., Brazier, J., Kuijper, E. & Poxton, I. (2007). Prospective study of Clostridium difficile infections in Europe with phenotypic and genotypic characterisation of the isolates. Clin Microbiol Infect 13, 1048-1057.
    • (2007) Clin Microbiol Infect , vol.13 , pp. 1048-1057
    • Barbut, F.1    Mastrantonio, P.2    Delmee, M.3    Brazier, J.4    Kuijper, E.5    Poxton, I.6
  • 2
    • 0036302998 scopus 로고    scopus 로고
    • Patterns of sequence conservation in the S-layer proteins and related sequences in Clostridium difficile
    • Calabi, E. & Fairweather, N. (2002). Patterns of sequence conservation in the S-layer proteins and related sequences in Clostridium difficile. J Bacteriol 184, 3886-3897.
    • (2002) J Bacteriol , vol.184 , pp. 3886-3897
    • Calabi, E.1    Fairweather, N.2
  • 3
    • 0022970462 scopus 로고
    • Comparison of serogrouping and polyacrylamide gel electrophoresis for typing Clostridium difficile
    • Delmee, M., Laroche, Y., Avesani, V. & Cornelis, G. (1986). Comparison of serogrouping and polyacrylamide gel electrophoresis for typing Clostridium difficile. J Clin Microbiol 24, 991-994.
    • (1986) J Clin Microbiol , vol.24 , pp. 991-994
    • Delmee, M.1    Laroche, Y.2    Avesani, V.3    Cornelis, G.4
  • 4
    • 29744441162 scopus 로고    scopus 로고
    • Sequence and phylogenetic analysis of the gene for surface layer protein, slpA, from 14 PCR ribotypes of Clostridium difficile
    • Eidhin, D. N., Ryan, A. W., Doyle, R. M., Walsh, J. B. & Kelleher, D. (2006). Sequence and phylogenetic analysis of the gene for surface layer protein, slpA, from 14 PCR ribotypes of Clostridium difficile. J Med Microbiol 55, 69-83.
    • (2006) J Med Microbiol , vol.55 , pp. 69-83
    • Eidhin, D.N.1    Ryan, A.W.2    Doyle, R.M.3    Walsh, J.B.4    Kelleher, D.5
  • 7
    • 62249130797 scopus 로고    scopus 로고
    • Characterisation of Clostridium difficile isolates by slpA and tcdC gene sequencing
    • Joost, I., Speck, K., Herrmann, M. & von Muller, L. (2009). Characterisation of Clostridium difficile isolates by slpA and tcdC gene sequencing. Int J Antimicrob Agents 33, S13-S18.
    • (2009) Int J Antimicrob Agents , vol.33
    • Joost, I.1    Speck, K.2    Herrmann, M.3    Von Muller, L.4
  • 8
    • 0036301677 scopus 로고    scopus 로고
    • Clostridium difficile genotyping based on slpA variable region in S-layer gene sequence: An alternative to serotyping
    • Karjalainen, T., Saumier, N., Barc, M. C., Delmee, M. & Collignon, A. (2002). Clostridium difficile genotyping based on slpA variable region in S-layer gene sequence: an alternative to serotyping. J Clin Microbiol 40, 2452-2458.
    • (2002) J Clin Microbiol , vol.40 , pp. 2452-2458
    • Karjalainen, T.1    Saumier, N.2    Barc, M.C.3    Delmee, M.4    Collignon, A.5
  • 10
    • 0032809943 scopus 로고    scopus 로고
    • Deletions in the repeating sequences of the toxin a gene of toxin A-negative, toxin B-positive Clostridium difficile strains
    • Kato, H., Kato, N., Katow, S.,Maegawa, T., Nakamura, S. & Lyerly, D. M. (1999). Deletions in the repeating sequences of the toxin A gene of toxin A-negative, toxin B-positive Clostridium difficile strains. FEMS Microbiol Lett 175, 197-203.
    • (1999) FEMS Microbiol Lett , vol.175 , pp. 197-203
    • Kato, H.1    Kato, N.2    Katow, S.3    Maegawa, T.4    Nakamura, S.5    Lyerly, D.M.6
  • 12
    • 15544378839 scopus 로고    scopus 로고
    • Typing by sequencing the slpA gene of Clostridium difficile strains causing multiple outbreaks in Japan
    • Kato, H., Yokoyama, T. & Arakawa, Y. (2005a). Typing by sequencing the slpA gene of Clostridium difficile strains causing multiple outbreaks in Japan. J Med Microbiol 54, 167-171.
    • (2005) J Med Microbiol , vol.54 , pp. 167-171
    • Kato, H.1    Yokoyama, T.2    Arakawa, Y.3
  • 13
    • 30744450536 scopus 로고    scopus 로고
    • Rapid and simple method for detecting the toxin B gene of Clostridium difficile in stool specimens by loop-mediated isothermal amplification
    • Kato, H., Yokoyama, T., Kato, H. & Arakawa, Y. (2005b). Rapid and simple method for detecting the toxin B gene of Clostridium difficile in stool specimens by loop-mediated isothermal amplification. J Clin Microbiol 43, 6108-6112.
    • (2005) J Clin Microbiol , vol.43 , pp. 6108-6112
    • Kato, H.1    Yokoyama, T.2    Kato, H.3    Arakawa, Y.4
  • 15
    • 34250660545 scopus 로고    scopus 로고
    • Prevalence of PCR ribotypes among Clostridium difficile isolates from pigs, calves, and other species
    • Keel, K., Brazier, J. S., Post, K. W., Weese, S. & Songer, J. G. (2007). Prevalence of PCR ribotypes among Clostridium difficile isolates from pigs, calves, and other species. J Clin Microbiol 45, 1963-1964.
    • (2007) J Clin Microbiol , vol.45 , pp. 1963-1964
    • Keel, K.1    Brazier, J.S.2    Post, K.W.3    Weese, S.4    Songer, J.G.5
  • 16
    • 38949178833 scopus 로고    scopus 로고
    • Comparison of seven techniques for typing international epidemic strains of Clostridium difficile: Restriction endonuclease analysis, pulsed-field gel electrophoresis, PCR-ribotyping, multilocus sequence typing, multilocus variable-number tandem-repeat analysis, amplified fragment length polymorphism, and surface layer protein A gene sequence typing
    • other authors
    • Killgore, G., Thompson, A., Johnson, S., Brazier, J., Kuijper, E., Pepin, J., Frost, E. H., Savelkoul, P., Nicholson, B. & other authors (2008). Comparison of seven techniques for typing international epidemic strains of Clostridium difficile: restriction endonuclease analysis, pulsed-field gel electrophoresis, PCR-ribotyping, multilocus sequence typing, multilocus variable-number tandem-repeat analysis, amplified fragment length polymorphism, and surface layer protein A gene sequence typing. J Clin Microbiol 46, 431-437.
    • (2008) J Clin Microbiol , vol.46 , pp. 431-437
    • Killgore, G.1    Thompson, A.2    Johnson, S.3    Brazier, J.4    Kuijper, E.5    Pepin, J.6    Frost, E.H.7    Savelkoul, P.8    Nicholson, B.9
  • 17
    • 40749109390 scopus 로고    scopus 로고
    • Increasing prevalence of toxin A-negative, toxin Bpositive isolates of Clostridium difficile in Korea: Impact on laboratory diagnosis
    • Kim, H., Riley, T. V., Kim, M., Kim, C. K., Yong, D., Lee, K., Chong, Y. & Park, J. W. (2008). Increasing prevalence of toxin A-negative, toxin Bpositive isolates of Clostridium difficile in Korea: impact on laboratory diagnosis. J Clin Microbiol 46, 1116-1117.
    • (2008) J Clin Microbiol , vol.46 , pp. 1116-1117
    • Kim, H.1    Riley, T.V.2    Kim, M.3    Kim, C.K.4    Yong, D.5    Lee, K.6    Chong, Y.7    Park, J.W.8
  • 18
    • 0141528564 scopus 로고    scopus 로고
    • High frequency of antibiotic-associated diarrhea due to toxin A-negative, toxin B-positive Clostridium difficile in a hospital in Japan and risk factors for infection
    • other authors
    • Komatsu, M., Kato, H., Aihara, M., Shimakawa, K., Iwasaki, M., Nagasaka, Y., Fukuda, S., Matsuo, S., Arakawa, Y. & other authors (2003). High frequency of antibiotic-associated diarrhea due to toxin A-negative, toxin B-positive Clostridium difficile in a hospital in Japan and risk factors for infection. Eur J Clin Microbiol Infect Dis 22, 525-529.
    • (2003) Eur J Clin Microbiol Infect Dis , vol.22 , pp. 525-529
    • Komatsu, M.1    Kato, H.2    Aihara, M.3    Shimakawa, K.4    Iwasaki, M.5    Nagasaka, Y.6    Fukuda, S.7    Matsuo, S.8    Arakawa, Y.9
  • 22
    • 34248589086 scopus 로고    scopus 로고
    • Toxin profiles and resistances to macrolides and newer fluoroquinolones as epidemicity determinants of clinical isolates of Clostridium difficile from Warsaw, Poland
    • other authors
    • Pituch, H., Van Leeuwen, W., Maquelin, K., Wultanska, D., Obuch-Woszczatynski, P., Nurzynska, G., Kato, H., Reijans, M., Meisel-Mikolajczyk, F. & other authors (2007). Toxin profiles and resistances to macrolides and newer fluoroquinolones as epidemicity determinants of clinical isolates of Clostridium difficile from Warsaw, Poland. J Clin Microbiol 45, 1607-1610.
    • (2007) J Clin Microbiol , vol.45 , pp. 1607-1610
    • Pituch, H.1    Van Leeuwen, W.2    Maquelin, K.3    Wultanska, D.4    Obuch-Woszczatynski, P.5    Nurzynska, G.6    Kato, H.7    Reijans, M.8    Meisel-Mikolajczyk, F.9
  • 23
    • 0344492211 scopus 로고    scopus 로고
    • New types of toxin A-negative, toxin B-positive strains among Clostridium difficile isolates from Asia
    • Rupnik, M., Kato, N., Grabnar, M. & Kato, H. (2003). New types of toxin A-negative, toxin B-positive strains among Clostridium difficile isolates from Asia. J Clin Microbiol 41, 1118-1125.
    • (2003) J Clin Microbiol , vol.41 , pp. 1118-1125
    • Rupnik, M.1    Kato, N.2    Grabnar, M.3    Kato, H.4
  • 24
    • 16944363424 scopus 로고    scopus 로고
    • Multicenter typing comparison of sporadic and outbreak Clostridium difficile isolates from geographically diverse hospitals
    • other authors
    • Samore, M., Killgore, G., Johnson, S., Goodman, R., Shim, J., Venkataraman, L., Sambol, S., DeGirolami, P., Tenover, F. & other authors (1997). Multicenter typing comparison of sporadic and outbreak Clostridium difficile isolates from geographically diverse hospitals. J Infect Dis 176, 1233-1238.
    • (1997) J Infect Dis , vol.176 , pp. 1233-1238
    • Samore, M.1    Killgore, G.2    Johnson, S.3    Goodman, R.4    Shim, J.5    Venkataraman, L.6    Sambol, S.7    DeGirolami, P.8    Tenover, F.9
  • 25
    • 34548483213 scopus 로고    scopus 로고
    • Molecular analysis of Clostridium difficile at a university teaching hospital in Japan: A shift in the predominant type over a five-year period
    • Sawabe, E., Kato, H., Osawa, K., Chida, T., Tojo, N., Arakawa, Y. & Okamura, N. (2007). Molecular analysis of Clostridium difficile at a university teaching hospital in Japan: a shift in the predominant type over a five-year period. Eur J Clin Microbiol Infect Dis 26, 695-703.
    • (2007) Eur J Clin Microbiol Infect Dis , vol.26 , pp. 695-703
    • Sawabe, E.1    Kato, H.2    Osawa, K.3    Chida, T.4    Tojo, N.5    Arakawa, Y.6    Okamura, N.7
  • 26
    • 0032901542 scopus 로고    scopus 로고
    • PCR targeted to the 16S-23S rRNA gene intergenic spacer region of Clostridium difficile and construction of a library consisting of 116 different PCR ribotypes
    • Stubbs, S. L., Brazier, J. S., O'Neill, G. L. & Duerden, B. I. (1999). PCR targeted to the 16S-23S rRNA gene intergenic spacer region of Clostridium difficile and construction of a library consisting of 116 different PCR ribotypes. J Clin Microbiol 37, 461-463.
    • (1999) J Clin Microbiol , vol.37 , pp. 461-463
    • Stubbs, S.L.1    Brazier, J.S.2    O'Neill, G.L.3    Duerden, B.I.4
  • 27
    • 0034607782 scopus 로고    scopus 로고
    • Production of actin-specific ADP-ribosyltransferase (binary toxin) by strains of Clostridium difficile
    • Stubbs, S., Rupnik, M., Gibert, M., Brazier, J., Duerden, B. & Popoff, M. (2000). Production of actin-specific ADP-ribosyltransferase (binary toxin) by strains of Clostridium difficile. FEMS Microbiol Lett 186, 307-312.
    • (2000) FEMS Microbiol Lett , vol.186 , pp. 307-312
    • Stubbs, S.1    Rupnik, M.2    Gibert, M.3    Brazier, J.4    Duerden, B.5    Popoff, M.6
  • 28
    • 25144469664 scopus 로고    scopus 로고
    • Toxin production by an emerging strain of Clostridium difficile associated with outbreaks of severe disease in North America and Europe
    • Warny, M., Pepin, J., Fang, A., Killgore, G., Thompson, A., Brazier, J., Frost, E. & McDonald, L. C. (2005). Toxin production by an emerging strain of Clostridium difficile associated with outbreaks of severe disease in North America and Europe. Lancet 366, 1079-1084.
    • (2005) Lancet , vol.366 , pp. 1079-1084
    • Warny, M.1    Pepin, J.2    Fang, A.3    Killgore, G.4    Thompson, A.5    Brazier, J.6    Frost, E.7    McDonald, L.C.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.