Quantitative proteomics analysis of cell cycle-regulated golgi disassembly and reassembly

Journal of Biological Chemistry

Volumn 285, Issue 10, 2010, Pages 7197-7207

  Chen, Xuequn ^a   Simon, Eric S ^a   Xiang, Yi ^b   Kachman, Maureen ^a   Andrews, Philip C ^a   Wang, Yanzhuang ^b  

^a UNIVERSITY OF MICHIGAN MEDICAL SCHOOL   (United States)

^b UNIVERSITY OF MICHIGAN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ABSOLUTE QUANTIFICATION; CELL CYCLE; CELL DIVISIONS; CYTOSKELETAL PROTEINS; CYTOSOLS; DAUGHTER CELLS; FRAGMENTATION PROCESS; GOLGI MEMBRANE; HELA CELL; IN-VITRO ASSAYS; ISOELECTRIC FOCUSING; MATRIX ASSISTED LASER DESORPTION IONIZATION; MOLECULAR MACHINERY; MOLECULAR MECHANISM; PROTEOMIC APPROACHES; PROTEOMIC STUDIES; QUANTITATIVE APPROACH; QUANTITATIVE PROTEOMICS; RAB GTPASES; RAT LIVERS; REASSEMBLY; STACKED STRUCTURE; STRUCTURAL PROTEINS; TANDEM MASS SPECTROMETRY; WESTERN BLOTTING;

CELL PROLIFERATION; DESORPTION; ELECTROPHORESIS; IONIZATION OF LIQUIDS; LIQUID CHROMATOGRAPHY; MACHINERY; MASS SPECTROMETRY; MEMBRANES; MOLECULAR BIOLOGY; OPTICAL COMMUNICATION;

PROTEINS;

CYTOSKELETON PROTEIN; RAB PROTEIN; SNARE PROTEIN;

ANIMAL CELL; ARTICLE; CELL CYCLE REGULATION; CELL DIVISION; CONTROLLED STUDY; CYTOSOL; DOWN REGULATION; GOLGI COMPLEX; HELA CELL; HUMAN; HUMAN CELL; INTERPHASE; ISOELECTRIC FOCUSING; LIQUID CHROMATOGRAPHY; MITOSIS; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN STRUCTURE; PROTEOMICS; RAT; REGULATORY MECHANISM; UPREGULATION; WESTERN BLOTTING;

ANIMALS; CELL CYCLE; CELL-FREE SYSTEM; CLUSTER ANALYSIS; COMPUTATIONAL BIOLOGY; CYTOSOL; GOLGI APPARATUS; HELA CELLS; HUMANS; INTRACELLULAR MEMBRANES; LIVER; MEMBRANE PROTEINS; MOLECULAR SEQUENCE DATA; PEPTIDES; PROTEOME; PROTEOMICS; RATS;

RATTUS;

EID: 77951244687     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M109.047084     Document Type: Article

References (51)

1. Wang, Y. (2008) in The Golgi apparatus. State of the Art 110 Years after Camillo Golgi's Discovery (Mironov, A., Pavelka, M., and Luini, A., eds.) pp. 580-607, SpringerWeinNewYork, New York
2. Shorter, J., and Warren, G. (2002) Annu. Rev. Cell Dev. Biol. 18, 379-420
3. Liu, Z., Vong, Q. P., and Zheng, Y. (2007) Dev. Cell 12, 839-840
4. Brownhill, K., Wood, L., and Allan, V. (2009) Semin Cell Dev. Biol., in press
5. Tang, D., Mar, K., Warren, G., and Wang, Y. (2008) J. Biol. Chem. 283, 6085-6094
6. Bell, A. W., Ward, M. A., Blackstock, W. P., Freeman, H. N., Choudhary, J. S., Lewis, A. P., Chotai, D., Fazel, A., Gushue, J. N., Paiement, J., Palcy, S., Chevet, E., Lafrenière-Roula, M., Solari, R., Thomas, D. Y., Rowley, A., and Bergeron, J. J. (2001) J. Biol. Chem. 276, 5152-5165
7. Wu, C. C., MacCoss, M. J., Mardones, G., Finnigan, C., Mogelsvang, S., Yates, J. R., 3rd, and Howell, K. E. (2004) Mol. Biol. Cell 15, 2907-2919
8. Wu, C. C., Taylor, R. S., Lane, D. R., Ladinsky, M. S., Weisz, J. A., and Howell, K. E. (2000) Traffic 1, 963-975
9. Wu, C. C., Yates, J. R., 3rd, Neville, M. C., and Howell, K. E. (2000) Traffic 1, 769-782
10. Taylor, R. S., Wu, C. C., Hays, L. G., Eng, J. K., Yates, J. R., 3rd, and Howell, K. E. (2000) Electrophoresis 21, 3441-3459
11. Mogelsvang, S., and Howell, K. E. (2006) Curr. Opin. Cell Biol. 18, 438-443
12. Misteli, T., and Warren, G. (1994) J. Cell Biol. 125, 269-282
13. Rabouille, C., Kondo, H., Newman, R., Hui, N., Freemont, P., and Warren, G. (1998) Cell 92, 603-610
14. Rabouille, C., Misteli, T., Watson, R., and Warren, G. (1995) J. Cell Biol. 129, 605-618
15. Shorter, J., and Warren, G. (1999) J. Cell Biol. 146, 57-70
16. Satoh, A., Wang, Y., Malsam, J., Beard, M. B., and Warren, G. (2003) Traffic 4, 153-161
17. Kondo, H., Rabouille, C., Newman, R., Levine, T. P., Pappin, D., Freemont, P., and Warren, G. (1997) Nature 388, 75-78
18. Rabouille, C., Levine, T. P., Peters, J. M., and Warren, G. (1995) Cell 82, 905-914
19. Wang, Y., Satoh, A., Warren, G., and Meyer, H. H. (2004) J. Cell Biol. 164, 973-978
20. Xiang, Y., Seemann, J., Bisel, B., Punthambaker, S., and Wang, Y. (2007) J. Biol. Chem. 282, 21829-21837
21. Barr, F. A., Puype, M., Vandekerckhove, J., and Warren, G. (1997) Cell 91, 253-262
22. Shorter, J., Watson, R., Giannakou, M. E., Clarke, M., Warren, G., and Barr, F. A. (1999) EMBO J. 18, 4949-4960
23. Wang, Y., Seemann, J., Pypaert, M., Shorter, J., and Warren, G. (2003) EMBO J. 22, 3279-3290
24. Ross, P. L., Huang, Y. N., Marchese, J. N., Williamson, B., Parker, K., Hattan, S., Khainovski, N., Pillai, S., Dey, S., Daniels, S., Purkayastha, S., Juhasz, P., Martin, S., Bartlet-Jones, M., He, F., Jacobson, A., and Pappin, D. J. (2004) Mol. Cell Proteomics 3, 1154-1169
25. Zieske, L. R. (2006) J. Exp. Bot. 57, 1501-1508
26. Aggarwal, K., Choe, L. H., and Lee, K. H. (2006) Brief Funct. Genomic Proteomic 5, 112-120
27. Wang, Y., Satoh, A., and Warren, G. (2005) J. Biol. Chem. 280, 4921-4928
28. Wang, Y., Taguchi, T., and Warren, G. (2005) in Cell Biology: A Laboratory Handbook (Celis, J., ed.) 3rd Ed., pp. 33-39, Elsevier Science, San Diego, CA
29. Shilov, I. V., Seymour, S. L., Patel, A. A., Loboda, A., Tang, W. H., Keating, S. P., Hunter, C. L., Nuwaysir, L. M., and Schaeffer, D. A. (2007) Mol. Cell Proteomics 6, 1638-1655
30. Lucocq, J. M., Berger, E. G., and Warren, G. (1989) J. Cell Biol. 109, 463-474
31. Angers, A., Ramjaun, A. R., and McPherson, P. S. (2004) J. Biol. Chem. 279, 11471-11479
32. Bonifacino, J. S., and Traub, L. M. (2003) Annu. Rev. Biochem. 72, 395-447
33. Scott, P. M., Bilodeau, P. S., Zhdankina, O., Winistorfer, S. C., Hauglund, M. J., Allaman, M. M., Kearney, W. R., Robertson, A. D., Boman, A. L., and Piper, R. C. (2004) Nat. Cell Biol. 6, 252-259
34. Meyer, H. H., Wang, Y., and Warren, G. (2002) EMBO J. 21, 5645-5652
35. Barr, F. A., and Short, B. (2003) Curr. Opin. Cell Biol. 15, 405-413
36. Seemann, J., Jokitalo, E., Pypaert, M., and Warren, G. (2000) Nature 407, 1022-1026
37. Keshamouni, V. G., Michailidis, G., Grasso, C. S., Anthwal, S., Strahler, J. R., Walker, A., Arenberg, D. A., Reddy, R. C., Akulapalli, S., Thannickal, V. J., Standiford, T. J., Andrews, P. C., and Omenn, G. S. (2006) J. Proteome Res. 5, 1143-1154
38. Gilchrist, A., Au, C. E., Hiding, J., Bell, A. W., Fernandez-Rodriguez, J., Lesimple, S., Nagaya, H., Roy, L., Gosline, S. J., Hallett, M., Paiement, J., Kearney, R. E., Nilsson, T., and Bergeron, J. J. (2006) Cell 127, 1265-1281
39. Duden, R. (2003) Mol. Membr. Biol. 20, 197-207
40. Zerial, M., and McBride, H. (2001) Nat. Rev. Mol. Cell Biol. 2, 107-117
41. Pfeffer, S. (2005) Biochem. Soc. Trans. 33, 627-630
42. Pfeffer, S. R., Soldati, T., Geissler, H., Rancaño, C., and Dirac-Svejstrup, B. (1995) Cold Spring Harb. Symp. Quant Biol. 60, 221-227
43. Matheson, J., Yu, X., Fielding, A. B., and Gould, G. W. (2005) Biochem. Soc. Trans. 33, 1290-1294
44. Agop-Nersesian, C., Naissant, B., Ben Rached, F., Rauch, M., Kretzschmar, A., Thiberge, S., Menard, R., Ferguson, D. J., Meissner, M., and Langsley, G. (2009) PLoS Pathog. 5, e1000270
45. Giansanti, M. G., Belloni, G., and Gatti, M. (2007) Mol. Biol. Cell 18, 5034-5047
46. Schonteich, E., Pilli, M., Simon, G. C., Matern, H. T., Junutula, J. R., Sentz, D., Holmes, R. K., and Prekeris, R. (2007) Eur. J. Cell Biol. 86, 417-431
47. Ríos, R. M., Sanchís, A., Tassin, A. M., Fedriani, C., and Bornens, M. (2004) Cell 118, 323-335
48. Linstedt, A. D. (2004) Cell 118, 271-272
49. Barr, F. A., and Egerer, J. (2005) J. Cell Biol. 168, 993-998
50. Infante, C., Ramos-Morales, F., Fedriani, C., Bornens, M., and Rios, R. M. (1999) J. Cell Biol. 145, 83-98
51. Valderrama, F., Durán, J. M., Babià, T., Barth, H., Renau-Piqueras, J., and Egea, G. (2001) Traffic 2, 717-726