Mycobacterium tuberculosis cAMP receptor protein (Rv3676) differs from the Escherichia coli paradigm in its cAMP binding and DNA binding properties and transcription activation properties

Journal of Biological Chemistry

Volumn 285, Issue 10, 2010, Pages 7016-7027

  Stapleton, Melanie ^a   Haq, Ihtshamul ^a   Hunt, Debbie M ^b   Arnvig, Kristine B ^b   Artymiuk, Peter J ^a   Buxton, Roger S ^b   Green, Jeffrey ^a  

^a UNIVERSITY OF SHEFFIELD   (United Kingdom)

^b NATIONAL INSTITUTE FOR MEDICAL RESEARCH   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVATION PROPERTY; COMPLEX FORMATIONS; CYCLIC AMP RECEPTOR PROTEINS; DNA BINDING; DNA-BINDING PROPERTIES; DORMANT STATE; HIGH CONCENTRATION; HOMODIMERS; IN-VITRO; M. TUBERCULOSIS; MYCOBACTERIUM TUBERCULOSIS; RECEPTOR PROTEINS;

BINDING ENERGY; BINDING SITES; BIOCHEMISTRY; CHEMICAL ACTIVATION; COMPLEXATION; DNA; ESCHERICHIA COLI; FETAL MONITORING; GENES; TRANSCRIPTION FACTORS;

TRANSCRIPTION;

C REACTIVE PROTEIN; C REACTIVE PROTEIN 1; C REACTIVE PROTEIN 2; C REACTIVE PROTEIN MT; CYCLIC AMP; HETERODIMER; UNCLASSIFIED DRUG;

ARTICLE; BINDING SITE; DNA BINDING; ENTROPY; ENZYME INHIBITION; ESCHERICHIA COLI; GENE EXPRESSION REGULATION; IN VITRO STUDY; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; PRIORITY JOURNAL; PROTEIN BINDING; TRANSCRIPTION INITIATION; TRANSCRIPTION REGULATION;

BACTERIAL PROTEINS; BASE SEQUENCE; BINDING SITES; CYCLIC AMP; CYCLIC AMP RECEPTOR PROTEIN; DNA, BACTERIAL; ESCHERICHIA COLI; GENE EXPRESSION REGULATION, BACTERIAL; GENES, REPORTER; HUMANS; MOLECULAR SEQUENCE DATA; MOLECULAR STRUCTURE; MUTAGENESIS, SITE-DIRECTED; MYCOBACTERIUM TUBERCULOSIS; PROMOTER REGIONS, GENETIC; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN MULTIMERIZATION; TRANS-ACTIVATORS; TRANSCRIPTIONAL ACTIVATION;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; MYCOBACTERIUM TUBERCULOSIS;

EID: 77951243882     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M109.047720     Document Type: Article

References (51)

1. Dye, C., Scheele, S., Dolin, P., Pathania, V., and Raviglione, M. C. (1999) J. Am. Med. Assoc. 282, 677-686
2. Russell, D. G. (2001) Nat. Rev. Mol. Cell Biol. 2, 569-577
3. Stewart, G. R., Robertson, B. D., and Young, D. B. (2003) Nat. Rev. Microbiol. 1, 97-105
4. Cole, S. T., Brosch, R., Parkhill, J., Garnier, T., Churcher, C., Harris, D., Gordon, S. V., Eiglmeier, K., Gas, S., Barry, C. E., 3rd, Tekaia, F., Badcock, K., Basham, D., Brown, D., Chillingworth, T., Connor, R., Davies, R., Devlin, K., Feltwell, T., Gentles, S., Hamlin, N., Holroyd, S., Hornsby, T., Jagels, K., Krogh, A., McLean, J., Moule, S., Murphy, L., Oliver, K., Osborne, J., Quail, M. A., Rajandream, M. A., Rogers, J., Rutter, S., Seeger, K., Skelton, J., Squares, R., Squares, S., Sulston, J. E., Taylor, K., Whitehead, S., and Barrell, B. G. (1998) Nature 393, 537-544
5. Agarwal, N., Lamichhane, G., Gupta, R., Nolan, S., and Bishai, W. R. (2009) Nature 460, 98-102
6. Lowrie, D. B., Jackett, P. S., and Ratcliffe, N. A. (1975) Nature 254, 600-602
7. Bai, G., Schaak, D. D., and McDonough, K. A. (2009) FEMS Immunol. Med. Microbiol. 55, 68-73
8. Gazdik, M. A., and McDonough, K. A. (2005) J. Bacteriol. 187, 2681-2692
9. Busby, S., and Kolb, A. (1996) in Regulation of Gene Expression in Escherichia coli. (Lin, E. C., and Lynch, A. S., eds) pp. 255-279, R. G. Landes Co., Austin, TX
10. Busby, S., and Ebright, R. E. (1999) J. Mol. Biol. 293, 199-213
11. Grainger, D. C., Hurd, D., Harrison, M., Holdstock, J., and Busby, S. J. (2005) Proc. Natl. Acad. Sci. U.S.A. 102, 17693-17698
12. Kirin, E., Sismeiro, O., Danchin, A., and Bertin, P. N. (2002) Microbiology 148, 1553-1559
13. Berg, O. G., and von Hippel, P. H. (1988) J. Mol. Biol. 200, 709-723
14. Browning, D. F., and Busby, S. J. (2004) Nat. Rev. Microbiol. 2, 57-65
15. Bai, G., McCue, L. A., and McDonough, K. A. (2005) J. Bacteriol. 187, 7795-7804
16. Rickman, L., Scott, C., Hunt, D. M., Hutchinson, T., Menéndez, M. C., Whalan, R., Hinds, J., Colston, M. J., Green, J., and Buxton, R. S. (2005) Mol. Microbiol. 56, 1274-1286
17. Agarwal, N., Raghunand, T. R., and Bishai, W. R. (2006) Microbiology 152, 2749-2756
18. Spreadbury, C. L., Pallen, M. J., Overton, T., Behr, M. A., Mostowy, S., Spiro, S., Busby, S. J., and Cole, J. A. (2005) Microbiology 151, 547-556
19. Bai, G., Gazdik, M. A., Schaak, D. D., and McDonough, K. A. (2007) Infect. Immun. 75, 5509-5517
20. Hunt, D. M., Saldanha, J. W., Brennan, J. F., Benjamin, P., Strom, M., Cole, J. A., Spreadbury, C. L., and Buxton, R. S. (2008) Infect. Immun. 76, 2227-2234
21. Mukamolova, G. V., Turapov, O. A., Young, D. I., Kaprelyants, A. S., Kell, D. S., and Young, M. (2002) Mol. Microbiol. 46, 623-635
22. den Hengst, C. D., and Buttner, M. J. (2008) Biochim. Biophys. Acta 1780, 1201-1216
23. Jakimowicz, P., Cheesman, M. R., Bishai, W. R., Chater, K. F., Thomson, A. J., and Buttner, M. J. (2005) J. Biol. Chem. 280, 8309-8315
24. Alam, M. S., Garg, S. K., and Agrawal, P. (2009) FEBS J. 276, 76-93
25. Singh, A., Crossman, D. K., Mai, D., Guidry, L., Voskuil, M. I., Renfrow, M. B., and Steyn, A. J. (2009) PLoS Pathogens 8, e1000545
26. Soliveri, J. A., Gomez, J., Bishai, W. R., and Chater, K. F. (2000) Microbiology 146, 333-343
27. Takahashi, M., Blazy, B., and Baudras, A. (1989) J. Mol. Biol. 207, 783-796
28. Casadaban, M. J., and Cohen, S. N. (1980) J. Mol. Biol. 138, 179-207
29. Busby, S., Kotlarz, D., and Buc, H. (1983) J. Mol. Biol. 167, 259-274
30. Kubica, G. P., Kim, T. H., and Dunbar, F. P. (1972) Int. J. Syst. Bacteriol. 22, 99-106
31. Snapper, S. B., Melton, R. E., Mustafa, S., Kieser, T., and Jacobs, W. R., Jr. (1990) Mol. Microbiol. 4, 1911-1919
32. Lodge, J., Williams, R., Bell, A., Chan, B., and Busby, S. (1990) FEMS Microbiol. Lett. 67, 221-225
33. Marsh, P. (1986) Nucleic Acids Res. 14, 3603
34. Bell, A., Gaston, K., Williams, R., Chapman, K., Kolb, A., Buc, H., Minchin, S., Williams, J., and Busby, S. (1990) Nucleic Acids Res. 18, 7243-7250
35. Papavinasasundaram, K. G., Anderson, C., Brooks, P. C., Thomas, N. A., Movahedzadeh, F., Jenner, P. J., Colston, M. J., and Davis, E. O. (2001) Microbiology 147, 3271-3279
36. Sambrook, J. W., and Russell, D. W. (2001) Molecular Cloning: A Laboratory Manual, 3rd Ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
37. Wiseman, T., Williston, S., Brandts, J. F., and Lin, L. N. (1989) Anal. Biochem. 179, 131-137
38. Miller, J. H. (1972) Experiments in Molecular Genetics, pp. 352-355, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
39. Maxam, A. M., and Gilbert, W. (1980) Methods Enzymol. 65, 499-560
40. Beaucher, J., Rodrigue, S., Jaques, P. E., Smith, I., Brzezinski, R., and Gaudreau, L. (2002) Mol. Microbiol. 45, 1527-1540
41. Akter, Y., Tundup, S., and Hasnain, S. E. (2007) Int. J. Med. Microbiol. 297, 451-457
42. Angulo, J., and Krakow, J. S. (1986) J. Biol. Chem. 262, 11315-11319
43. Reddy, M. C., Palaninathan, S. K., Bruning, J. B., Thurman, C., Smith, D., and Sacchettini, J. C. (2009) J. Biol. Chem. 284, 36581-36591
44. Gorshkova, I., Moore, J. L., McKenney, K. H., and Schwarz, F. P. (1995) J. Biol. Chem. 270, 21679-21683
45. Popovych, N., Tseng, S. R., Tonelli, M., Ebright, R. H., and Kalodimos, C. G. (2009) Proc. Natl. Acad. Sci. U.S.A. 106, 6927-6932
46. Weber, I. T., and Steitz, T. A. (1987) J. Mol. Biol. 198, 311-326
47. Passner, J. M., and Steitz, T. A. (1997) Proc. Natl. Acad. Sci. U.S.A. 94, 2843-2847
48. Moore, J. L., Gorshkova, I. I., Brown, J. W., McKenney, K. H., and Schwarz, F. P. (1996) J. Biol. Chem. 271, 21273-21278
49. Padh, H., and Venkitasubramanian, T. A. (1976) Microbios 16, 183-189
50. Rohde, K. H., Abramovich, R. B., and Russell, D. G. (2007) Cell Host Microbe 2, 352-364
51. Schnappinger, D., Ehrt, S., Voskuil, M. I., Liu, Y., Mangan, J. A., Monahan, I. M., Dolganov, G., Efron, B., Butcher, P. D., Nathan, C., and Schoolnik, G. K. (2003) J. Exp. Med. 198, 693-704