Electrostatic interaction of phytochromobilin synthase and ferredoxin for biosynthesis of phytochrome chromophore

Journal of Biological Chemistry

Volumn 285, Issue 7, 2010, Pages 5056-5065

  Chiu, Fang Yi ^a   Chen, Yu Rong ^a   Tu, Shih Long ^a  

^a INSTITUTE OF PLANT AND MICROBIAL BIOLOGY   (Taiwan)

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVE SITE; ARABIDOPSIS; ARABIDOPSIS THALIANA; BIOCHEMICAL DATA; CHARGED RESIDUES; CHEMICAL CROSS-LINKING; DIRECT ELECTRON TRANSFER; DOCKING MECHANISMS; DOUBLE BONDS; ELECTRON DONORS; ELECTRON TRANSFER; ELECTROSTATIC INTERACTIONS; HETERODIMERIC COMPLEXES; IN-PLANTS; INTERACTION MECHANISMS; MODEL PROTEINS; OPEN CHAIN; PHYTOCHROME CHROMOPHORES; PHYTOCHROMOBILIN; PROTEIN-PROTEIN INTERACTIONS; REDUCTION ACTIVITY; SURFACE RESIDUES; SYNTHASES; TETRAPYRROLES;

BIOCHEMISTRY; CHEMICAL BONDS; CHROMOPHORES; CROSSLINKING; DOCKING; ELECTRON TRANSITIONS; FUNCTIONAL GROUPS; OLEFINS; PORPHYRINS; PROTEINS; SULFUR;

COMPLEXATION;

BILIVERDIN; ENZYME; FERREDOXIN; FERREDOXIN DEPENDENT BILIN REDUCTASE; HETERODIMER; IRON; PHYTOCHROME; PHYTOCHROMIBILIN SYNTHASE; PIGMENT; PROPIONIC ACID; SULFUR; TETRAPYRROLE DERIVATIVE; UNCLASSIFIED DRUG;

ARABIDOPSIS; ARTICLE; BIOSYNTHESIS; CATALYSIS; CHROMATOPHORE; CONTROLLED STUDY; CROSS LINKING; ELECTRON TRANSPORT; MOLECULAR DOCKING; NONHUMAN; PHYTOCHROME CHROMOPHORE; PRIORITY JOURNAL; PROTEIN PROTEIN INTERACTION; REDUCTION; STATIC ELECTRICITY;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; BILIVERDINE; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; COMPUTER SIMULATION; FERREDOXINS; MUTAGENESIS, SITE-DIRECTED; OXIDATION-REDUCTION; OXIDOREDUCTASES; PHYTOCHROME; PLANTS, GENETICALLY MODIFIED; PROTEIN BINDING; PROTEIN MULTIMERIZATION; PROTEIN STRUCTURE, SECONDARY; STRUCTURAL HOMOLOGY, PROTEIN;

ARABIDOPSIS; ARABIDOPSIS THALIANA;

EID: 77951160542     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M109.075747     Document Type: Article

References (33)

1. Frankenberg, N. F., and Lagarias, J. C. (2003) in The Porphyrin Handbook, Chlorophylls and Bilins: Biosynthesis Structure and Degradation (Guilard, R., ed), Academic Press, New York
2. Dammeyer, T., Bagby, S. C., Sullivan, M. B., Chisholm, S. W., and Frankenberg-Dinkel, N. (2008) Curr. Biol. 18, 442-448
3. Frankenberg, N., and Lagarias, J. C. (2003) J. Biol. Chem. 278, 9219-9226
4. Kohchi, T., Mukougawa, K., Frankenberg, N., Masuda, M., Yokota, A., and Lagarias, J. C. (2001) Plant Cell 13, 425-436
5. Tu, S., Gunn, A., Toney, M. D., Britt, R. D., and Lagarias, J. C. (2004) J. Am. Chem. Soc. 126, 8682-8693
6. Tu, S. L., Chen, H. C., and Ku, L. W. (2008) J. Biol. Chem. 283, 27555-27564
7. Hagiwara, Y., Sugishima, M., Takahashi, Y., and Fukuyama, K. (2006) Proc. Natl. Acad. Sci. U.S.A. 103, 27-32
8. Tu, S. L., Rockwell, N. C., Lagarias, J. C., and Fisher, A. J. (2007) Biochemistry 46, 1484-1494
9. Dammeyer, T., Hofmann, E., and Frankenberg-Dinkel, N. (2008) J. Biol. Chem. 283, 27547-27554
10. Frankenberg, N., Mukougawa, K., Kohchi, T., and Lagarias, J. C. (2001) Plant Cell 13, 965-978
11. McDowell, M. T., and Lagarias, J. C. (2001) Plant Physiol. 126, 1546-1554
12. Beale, S. I., and Cornejo, J. (1991) J. Biol. Chem. 266, 22328-22332
13. Akashi, T., Matsumura, T., Ideguchi, T., Iwakiri, K., Kawakatsu, T., Taniguchi, I., and Hase, T. (1999) J. Biol. Chem. 274, 29399-29405
14. De Pascalis, A. R., Jelesarov, I., Ackermann, F., Koppenol, W. H., Hirasawa, M., Knaff, D. B., and Bosshard, H. R. (1993) Protein Sci. 2, 1126-1135
15. Dose, M. M., Hirasawa, M., Kleis-SanFrancisco, S., Lew, E. L., and Knaff, D. B. (1997) Plant Physiol. 114, 1047-1053
16. Kurisu, G., Kusunoki, M., Katoh, E., Yamazaki, T., Teshima, K., Onda, Y., Kimata-Ariga, Y., and Hase, T. (2001) Nat. Struct. Biol. 8, 117-121
17. Martínez-Júlvez, M., Hermoso, J., Hurley, J. K., Mayoral, T., Sanz-Aparicio, J., Tollin, G., Gómez-Moreno, C., and Medina, M. (1998) Biochemistry 37, 17680-17691
18. Hanke, G. T., Kimata-Ariga, Y., Taniguchi, I., and Hase, T. (2004) Plant Physiol. 134, 255-264
19. Elich, T. D., McDonagh, A. F., Palma, L. A., and Lagarias, J. C. (1989) J. Biol. Chem. 264, 183-189
20. + Oxidoreductase in the Cyanobacterium Synechococcus sp. PCC7002, Pennsylvania State University, University Park, PA
21. Emsley, P., and Cowtan, K. (2004) Acta Crystallogr. D Biol. Crystallogr. 60, 2126-2132
22. Zanetti, G., Morelli, D., Ronchi, S., Negri, A., Aliverti, A., and Curti, B. (1988) Biochemistry 27, 3753-3759
23. Zanetti, G., Aliverti, A., and Curti, B. (1984) J. Biol. Chem. 259, 6153-6157
24. García-Sánchez, M. I., Díaz-Quintana, A., Gotor, C., Jacquot, J. P., De la Rosa, M. A., and Vega, J. M. (2000) J. Biol. Inorg. Chem. 5, 713-719
25. García-Sánchez, M. I., Gotor, C., Jacquot, J. P., Stein, M., Suzuki, A., and Vega, J. M. (1997) Eur. J. Biochem. 250, 364-368
26. Okada, K. (2009) FEBS Lett. 583, 1251-1256
27. Binda, C., Coda, A., Aliverti, A., Zanetti, G., and Mattevi, A. (1998) Acta Crystallogr. D. 54, 1353-1358
28. Sevrioukova, I. F. (2005) J. Mol. Biol. 347, 607-621
29. Huisman, J. G., Moorman, A. F., and Verkley, F. N. (1978) Biochem. Biophys. Res. Commun. 82, 1121-1131
30. Hanke, G. T., and Hase, T. (2008) Photochem. Photobiol. 84, 1302-1309
31. Yonekura-Sakakibara, K., Onda, Y., Ashikari, T., Tanaka, Y., Kusumi, T., and Hase, T. (2000) Plant Physiol. 122, 887-894
32. Rodriguez, R. E., Lodeyro, A., Poli, H. O., Zurbriggen, M., Peisker, M., Palatnik, J. F., Tognetti, V. B., Tschiersch, H., Hajirezaei, M. R., Valle, E. M., and Carrillo, N. (2007) Plant Physiol. 143, 639-649
33. Hanke, G. T., Okutani, S., Satomi, Y., Takao, T., Suzuki, A., and Hase, T. (2005) Plant Cell Environ. 28, 1146-1157