A proteome-wide perspective on peroxisome targeting signal 1(PTS1)-Pex5p affinities

Journal of the American Chemical Society

Volumn 132, Issue 11, 2010, Pages 3973-3979

  Ghosh, Debdip ^a   Berg, Jeremy M ^a  

^a NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CELL TYPES; GENES ENCODING; HIGH AFFINITY; HUMAN PROTEOME; HUMAN TISSUES; LOW LEVEL; MRNA LEVEL; ORDERS OF MAGNITUDE; PEROXISOMAL MATRIX; PEROXISOMAL TARGETING SIGNALS; PROTEIN PRODUCTION; PROTEOMES;

COMPLEXATION; CYTOLOGY; GENE EXPRESSION;

PROTEINS;

MESSENGER RNA; PROTEOME;

AFFINITY LABELING; ARTICLE; CELL TYPE; CONTROLLED STUDY; GENE EXPRESSION; HUMAN; HUMAN TISSUE; PEROXISOME; PROTEIN ANALYSIS; PROTEIN ASSEMBLY; PROTEIN INTERACTION; PROTEIN TARGETING;

AMINO ACID SEQUENCE; GENE EXPRESSION REGULATION; HUMANS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PEPTIDE FRAGMENTS; PEROXISOMES; PROTEIN BINDING; PROTEIN STRUCTURE, TERTIARY; PROTEOME; RECEPTORS, CYTOPLASMIC AND NUCLEAR; RNA, MESSENGER;

EID: 77949828223     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja9109049     Document Type: Article

References (31)

1. Blobel. G. ChemBioChem 2000, 1, 86-102,
2. Gould. S. G.; Keller. G. A.; Subramani. S. J. Cell Biol. 1987, 105, 2923-2931
3. Gould. S. J.: Keller, G. A.; Hosken, N.; Wilkinson, J.; Subramani. S. J. Cell Biol. 1989. 108, 1657-1664
4. Subramani, S. J. Membr. Biol. 1992, 125, 99-106.
5. Teter, S. A.; Klionsky, D. J. Trends Cell Biol. 1999, 9, 428-431
6. Gatto. G. J., Jr.; Geisbrecht. B. V.; Gould. S. J.; Berg. J. M. Nat. Struct. Biol. 2000, 7, 1091-1095
7. Stanley, W. A.; Filipp, F. V.; Kursula, P.; Schuller, N.; Fjdmann, R.; Schliebs, W.; Sattler, M.; Wilmanns, M. Mol. Cell 2006, 24, 653-663
8. Stanley, W. A.; Fodor, K.; Marti-Renom. M. A.; Schliebs, W.; Wilmanns, M. FEBS Lett. 2007, 581, 4795-4802
9. Lazarow, P. B. J. Neurovathol. Exp. Neurol, 1995, 54, 720-725
10. Schrader. M.; Fahimi, H. D. Histochem. Cell Biol. 2008, 129, 42140.
11. Gould. S. J.: Valle, D. Trends Genet. 2000, 16, 340-345
12. Fujiki, Y. FEBS Lett. 2000, 476, 42-46
13. Faust, P. L.; Banka, D.; Siriratsivawong, R.; Ng, V. G.; Wikander, T. M. J. Inherit. Metab. Dis. 2005, 28, 369-383
14. Fransen, M.; Brees, C.; Baumgart, E.; Vanhooren, J. C.; Baes, M.; Mannaerts, G. P.; Van Veldhoven. P. P. J. Biol. Chem. 1995, 270, 7731-7736
15. Distel. B.; Erdmann. R.; Gould. S. J.; Blobel, G.; Crane. D. I.; Creag. J. M.; Dodt, G.; Fujiki, Y.; Goodman, J. M.; Just, W. W.; Kiel, J. A.; Kunau, W. H.; Lazarow, P. B.: Mannaerts, G. P.; Moser, H. W.; Osumi, T.; Rachubinski, R. A.; Roscher, A.; Subramani, S.; Tabak, H. F.; Tsukamoto, T.; Valle, D.; van der Klei, I.; van Veldhoven, P. P.; Veenhuis. M. J. Cell Biol. 1996, 135, 1-3.
16. Maynard, E. L.; Gatto, G. J., Jr.; Berg. J. M. Proteins 2004, 55, 85661.
17. Lametschwandtner, G.; Brocard. C.; Fransen, M.; Van Veldhoven, P.; Berger, J.; Hartig, A. J. Biol. Chem. 1998, 273, 33635-33643
18. Brocard, C.; Hartig, A. Biochim. Bioohys. Acta 2006, 1763, 156573.
19. Purdue, P. E.; Lazarow, P. B. J. Cell Biol. 1996, 134, 849-862
20. Maynard, E. L.; Berg, J. M. J. Mol, Biol, 2007, 368, 1259-1266
21. Hashimoto, T. Neurochem. Res. 1999, 24, 551-563
22. Su, A. I.; Wiltshire, T.; Batalov, S.; Lapp, H.; Ching, K. A.; Block, D.; Zhang, J.; Soden, R.; Hayakawa, M.; Kreiman, G.; Cooke, M. P.; Walker, J. R.; Hogenesch, J. B. Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 6062-6067
23. Greenbaum, D.; Colangelo, C; Williams, K.; Gerstein, M. Genome Biol. 2003, 4, 117.
24. Greenbaum, D.; Jansen, R.; Gerstein, M. Bioinformatics 2002, 18, 58596.
25. Ideker, T.; Thorsson, V.; Ranish, J. A.; Christmas, R.; Buhler, J.; Eng, J. K.; Bumgarner, R.; Goodlett, D. R.; Aebersold, R.; Hood, L. Science 2001, 292, 929-934
26. Aoyama, T.; Souri, M.; Kamijo, T.; Ushikubo, S.; Hashimoto, T. Biochem. Biophys. Res. Commun. 1994, 201, 1541-1547
27. Jänne, J.; Alhonen, L.; Pietilä, M.; Keinänen, T. A. Eur. J. Biochem. 2004, 271, 877-894
28. Van den Munckhof, R. J. Histochem. J. 1996, 28, 401-429
29. Vanhooren, J. C.; Marynen, P.; Mannaerts, G. P.; Van Veldhoven, P. P. Rinchem. J. 1997, 325 (Pt 3), 593-599
30. Eisenhaber, B.; Eisenhaber, F. Curr. Protein Pept Sci. 2007, 8, 197203.
31. Issemann, I.; Green, S. Nature 1990, 347, 645-650