The role of phenotypic plasticity on the proteome differences between two sympatric marine snail ecotypes adapted to distinct micro-habitats

BMC Evolutionary Biology

Volumn 10, Issue 1, 2010, Pages

  Martínez Fernández, Mánica ^a   De La Cadena, María Páez ^a   Rolán Alvarez, Emilio ^a  

^a UNIVERSITY OF VIGO   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

ECOTYPE; EVOLUTIONARY BIOLOGY; MICROHABITAT; PHENOTYPIC PLASTICITY; PROTEIN; PROTEOMICS; SNAIL; SPECIATION (BIOLOGY); SYMPATRY;

GASTROPODA;

PROTEOME;

ANIMAL; ARTICLE; CHEMISTRY; CLUSTER ANALYSIS; ECOSYSTEM; GENETICS; PHENOTYPE; SNAIL; TWO DIMENSIONAL GEL ELECTROPHORESIS;

ANIMALS; CLUSTER ANALYSIS; ECOSYSTEM; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; PHENOTYPE; PROTEOME; SNAILS;

EID: 77949755748     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-10-65     Document Type: Article

References (52)

1. The evolutionary ecology of individual phenotypic plasticity in wild populations. DH Nussey AJ Wilson JE Brommer, J Evol Biol 2007 20 831 844 10.1111/j.1420-9101.2007.01300.x 17465894
2. The genetics of phenotypic plasticity. I. Heritability. SM Scheiner RF Lyman, J Evol Biol 1989 2 25 107 10.1046/j.1420-9101.1989.2020095.x
3. Testing the grain-size model for the evolution of phenotypic plasticity. J Hollander, Evolution 2008 62 1381 1389 10.1111/j.1558-5646.2008.00365.x 18331460
4. Genetic and statistical analyses of strong selection on polygenic traits: what, me normal? M Turelli NH Barton, Genetics 1994 138 913 941 7851785
5. Evolutionary origins of invasive populations. CE Lee GW Gelembiuk, Evol Appl 2008 1 427 448 10.1111/j.1752-4571.2008.00039.x
6. M Pigliucci, Phenotypic plasticity: beyond nature and nurture The John Hopkins University Press, Baltimore 2001
7. The evolution of phenotypic plasticity in plants. CD Schilichting, Annu Rev Ecol Syst 1986 17 667 693 10.1146/annurev.es.17.110186.003315
8. Evolution of phenotypic plasticity: where are we going now? M Pigliucci, Trends Ecol Evol 2005 20 481 486 10.1016/j.tree.2005.06.001 16701424
9. Modifying effects of phenotypic plasticity on interactions among natural selection, adaptation and gene flow. E Crispo, J Evol Biol 2008 21 1460 1469 10.1111/j.1420-9101.2008.01592.x 18681916
10. Phenotypic plasticity or speciation? A case from a clonal marine organism. C Prada NV Schizas PM Yoshioka, BMC Evol Biol 2008 8 47 18271961 10.1186/1471-2148-8-47
11. Plasticity constrained: Overgeneralized induction cues cause maladaptive phenotypes. RB Langerhans TJ DeWitt, Ecol Evol Res 2002 4 857 870
12. Morphological differentiation and genetic cohesiveness over a micro-environmental gradient in the marine snail Littorina saxatilis. K Johannesson B Johannesson E Rolán-Alvarez, Evolution 1993 47 1770 1787 10.2307/2410220
13. Sympatric speciation as a by-product of ecological adaptation in the Galicia Littorina saxatilis hybrid zone. E Rolán-Alvarez, J Molluscan Stud 2007 73 1 10 10.1093/mollus/eyl023
14. The maintenance of a cline in the marine snail Littorina saxatilis: the role of home site advantage and hybrid fitness in ecotype formation. E Rolán-Alvarez K Johannesson J Erlandsson, Evolution 1997 51 1838 1847 10.2307/2411006
15. Decomposing shell form into size and shape by geometric morphometric methods in two sympatric ecotypes of Littorina saxatilis. A Carvajal- Rodríguez P Conde-Padín E Rolán-Alvarez, J Molluscan Stud 2005 71 313 318 10.1093/mollus/eyi037
16. Genetic variation for shell traits in a direct-developing marine snail involved in a putative sympatric ecological speciation process. P Conde-Padín A Carvajal-Rodríguez M Carballo A Caballero E Rolán-Alvarez, Evol Ecol 2007 21 635 650 10.1007/s10682-006-9142-8
17. Comparing geographical genetic differentiation between candidate and noncandidate loci for adaptation strengthens support for parallel ecological divergence in the marine snail Littorina saxatilis. J Galindo P Morán E Rolán-Alvarez, Mol Ecol 2009 18 919 930 10.1111/j.1365-294X.2008.04076.x
18. The relative role of genetic determination and plastic response during ontogeny for shell shape traits subjected to diversifying selection. P Conde-Padín A Caballero E Rolán-Alvarez, Evolution 2009 63 1356 1363 10.1111/j.1558-5646.2009.00636.x 19187255
19. Proteomic comparison between two marine snail ecotypes reveals details about the biochemistry of adaptation. M Martínez-Fernández AM Rodríguez-Pĩeiro E Oliveira M Páez de la Cadena E Rolán-Alvarez, J Proteome Res 2008 7 4926 4934 10.1021/pr700863e 18937509
20. Detecting genetic responses to environmental change. AA Hoffmann Y Willi, Nat Rev Genet 2008 9 421 32 10.1038/nrg2339 18463665
21. Application of proteomics to ecology and population biology. TL Karr, Heredity 2008 100 200 206 10.1038/sj.hdy.6801008 17700638
22. Protein polymorphism between 2 Picea abies populations revealed by 2-dimensional gel electrophoresis and tandem mass spectrometry. CM Valcu C Lalanne G Müller-Starck C Plomion K Schlink, J Hered 2008 99 364 375 10.1093/jhered/esn007 18344527
23. Extreme changes to gene expression associated with homoploid hybrid speciation. MJ Hegarty GL Barker AC Brennan KJ Edwards RJ Abbott SJ Hiscock, Mol Ecol 2009 18 877 889 10.1111/j.1365-294X.2008.04054.x 19175502
24. The relationship between hatching rate and number of embryos of the brood pouch in Littorina saxatilis. P Conde-Padín M Carballo A Caballero E Rolán-Alvarez, J Sea Res 2008 60 223 225 10.1016/j.seares.2008.06.003
25. DS Falconer TFC Mackay, Introduction to quantitative genetics Longman, New York 4 1996
26. Phenotypic plasticity: linking molecular mechanisms with evolutionary outcomes. CD Schilichting H Smith, Evol Ecol 2002 16 189 211 10.1023/A:1019624425971
27. Heat induced changes in protein expression profiles of Norway spruce (Picea abies) ecotypes from different elevations. CM Valcu C Lalanne C Plomion K Schlink, Proteomics 2008 8 4287 4302 10.1002/pmic.200700992 18814337
28. Evolution of 2-DE protein patterns in a mussel hybrid zone. AP Diz DO Skibinski, Proteomics 2007 7 2111 2120 10.1002/pmic.200600954 17514682
29. Genetic variation underlying protein expression in eggs of the marine mussel Mytilus edulis. AP Diz E Dudley BW MacDonald B Pĩa EL Kenchington E Zouros DO Skibinski, Mol Cell Proteomics 2009 8 132 144 18794572 10.1074/mcp.M800237-MCP200
30. Two-dimensional gel electrophoresis of Mytilus galloprovincialis. Differences in protein expression between intertidal and cultured mussels. JL Lápez E Mosquera J Fuentes A Marina J Vázquez G Alvarez, Mar Ecol Prog Ser 2001 224 149 156 10.3354/meps224149
31. A proteomic approach to the study of the marine mussels, Mytilus edulis and Mytilus galloprovincialis. JL Lápez A Marina J Vázquez J Alvarez, Mar Biol 2002 141 217 223 10.1007/s00227-002-0827-4
32. Changes in protein expression profiles in bivalve molluscs (Chamaelea gallina) exposed to four model environmental pollutants. MJ Rodriguez-Ortega BE Grosvik A Rodriguez-Ariza A Goksoyr J Lopez-Barea, Proteomics 2003 3 1535 1543 10.1002/pmic.200300491 12923779
33. Identification of proteomic signatures of exposure to marine pollutants in mussels (Mytilus edulis). I Apraiz J Mi S Cristobal, Mol Cell Proteomics 2006 5 1274 1285 10.1074/mcp.M500333-MCP200 16603574
34. Phenotypic plasticity in two marine snails: constraints superseding life history. J Hollander ML Collyer DC Adams K Johannesson, J Evol Biol 2006 19 1861 1872 10.1111/j.1420-9101.2006.01171.x 17040383
35. Divergent selection and phenotypic plasticity during incipient speciation in Lake Victoria cichlid fish. IS Magalhaes S Mwaiko MV Schneider O Seehausen, J Evol Biol 2009 22 260 274 10.1111/j.1420-9101.2008.01637.x 19032503
36. Phenotypic plasticity rather than locally adapted ecotypes allows the invasive alligator weed to colonize a wide range of habitats. YP Geng XY Pan CY Xu WJ Zhang B Li JK Chen BR Lu ZP Song, Biol Invasions 2007 9 245 256 10.1007/s10530-006-9029-1
37. Genomic reaction norms: using integrative biology to understand molecular mechanisms of phenotypic plasticity. N Aubin-Horth SC Renn, Mol Ecol 2009 18 3763 3780 10.1111/j.1365-294X.2009.04313.x 19732339
38. Fundamentals of cDNA microarray data analysis. YF Leung D Cavalieri, Trends in Genetics 2003 19 649 59 10.1016/j.tig.2003.09.015 14585617
39. Gene expression profiling in evolutionary genetics. DL Hartl CD Meiklejohn CI Castillo-Davis D Cavalieri JM Ranz JP Townsend, The Evolution of Population Biology: Modern Synthesis Academic Press, New York, Singh R, Jain S, Uyenoyama M, 2003 74 93
40. A rapid and sensitive method for the quantification of microgram quantities of protein utilizing the principle of protein-dye binding. MM Bradford, Anal Biochem 1976 72 248 254 10.1016/0003-2697(76)90527-3 942051
41. Quantitation of microgram amounts of protein in two-dimensional polyacrylamide gel electrophoresis sample buffer. LS Ramagli LV Rodríguez, Electrophoresis 1985 6 559 563 10.1002/elps.1150061109
42. Simplified method for silver staining of proteins in polyacrylamide gels and the mechanism of silver staining. J Heukeshoven R Dernick, Electrophoresis 1985 6 103 112 10.1002/elps.1150060302
43. Two-dimensional gel analysis of human endometrial proteins: characterization of proteins with increased expression in hyperplasia and adenocarcinoma. I Byrjalsen P Mose Larsen SJ Fey L Nilas MR Larsen C Christiansen, Mol Hum Reprod 1999 5 748 756 10.1093/molehr/5.8.748 10421803
44. Analysis of brain proteins in Alzheimer's disease using high-resolution two-dimensional gel electrophoresis. T Tsuji S Shimohama S Kamiya T Sazuka O Ohara, J Neurol Sci 1999 166 100 106 10.1016/S0022-510X(99)00120-3 10475102
45. Studies of quantitative analysis of protein expression in Saccharomyces cerevisiae. JX Yan JC Sanchez L Tonella KL Williams DF Hochstrasser, Electrophoresis 1999 20 738 742 10.1002/(SICI)1522-2683(19990101)20:4/5<738:: AID-ELPS738>3.0.CO;2-2 10344242
46. B Winer, Statistical principles in experimental design McGraw-Hill, New York 1971
47. Techniques of analysis of variance in experimental marine biology and ecology. AJ Underwood, Oceanogr Mar Biol Annu Rev 1981 19 513 605
48. RR Sokal FJ Rohlf, Biometry Freeman and Co, New York 1995
49. A new multitest correction (SGoF) that increases its statistical power when increasing the number of tests. A Carvajal-Rodriguez J Ũa- Álvarez E Rolán-Álvarez, BMC bioinformatics 2008 10 209 10.1186/1471-2105-10-209
50. Genetics and evolution of phenotypic plasticity. SM Scheiner, Annu Rev Ecol Syst 1993 24 35 68 10.1146/annurev.es.24.110193.000343
51. Cautionary note on reporting eta-squared values from multifactor ANOVA designs. CA Pierce RA Block H Aguinis, Educ Psychol Meas 2004 64 916 924 10.1177/0013164404264848
52. Comparing geographical genetic differentiation between candidate and noncandidate loci for adaptation strengthens support for parallel ecological divergence in the marine snail Littorina saxatilis. J Galindo P Morán E Rolán-Alvarez, Mol Ecol 2009 18 919 930 10.1111/j.1365-294X.2008.04076.x