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Volumn 26, Issue 4, 2009, Pages 565-567

Copy number variant detection in inbred strains from short read sequence data

Author keywords

[No Author keywords available]

Indexed keywords

MUS;

EID: 77949519000     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btp693     Document Type: Article
Times cited : (39)

References (17)
  • 1
    • 42449115721 scopus 로고    scopus 로고
    • wuHMM: a robust algorithm to detect DNA copy number variation using long oligonucleotide microarray data
    • Cahan,P. et al. (2008) wuHMM: a robust algorithm to detect DNA copy number variation using long oligonucleotide microarray data. Nucleic Acids Res., 36, e41.
    • (2008) Nucleic Acids Res. , vol.36
    • Cahan, P.1
  • 2
    • 63449086972 scopus 로고    scopus 로고
    • The impact of copy number variation on local gene expression in mouse hematopoietic stem and progenitor cells
    • Cahan,P. et al. (2009) The impact of copy number variation on local gene expression in mouse hematopoietic stem and progenitor cells. Nat. Genet., 41, 430-437.
    • (2009) Nat. Genet. , vol.41 , pp. 430-437
    • Cahan, P.1
  • 3
    • 77950460950 scopus 로고    scopus 로고
    • Origins and functional impact of copy number variation in the human genome
    • [Epub ahead of print, doi: 1038/nature08516, October 7, 2009]
    • Conrad, D.F. et al. (2009) Origins and functional impact of copy number variation in the human genome. Nature [Epub ahead of print, doi: 1038/nature08516, October 7, 2009].
    • (2009) Nature
    • Conrad, D.F.1
  • 4
    • 38849101781 scopus 로고    scopus 로고
    • Significant gene content variation characterizes the genomes of inbred mouse strains
    • Cutler, G. et al. (2007) Significant gene content variation characterizes the genomes of inbred mouse strains. Genome Res., 17, 1743-1754.
    • (2007) Genome Res. , vol.17 , pp. 1743-1754
    • Cutler, G.1
  • 6
    • 9244229940 scopus 로고    scopus 로고
    • Hidden Markov models approach to the analysis of array CGH data
    • Fridlyand, J. et al. (2004) Hidden Markov models approach to the analysis of array CGH data. J. Multivar. Anal., 90, 132-153.
    • (2004) J. Multivar. Anal. , vol.90 , pp. 132-153
    • Fridlyand, J.1
  • 7
    • 33846614650 scopus 로고    scopus 로고
    • A high-resolution map of segmental DNA copy number variation in the mouse genome
    • Graubert, T.A. et al. (2007) A high-resolution map of segmental DNA copy number variation in the mouse genome. PLoS Genet., 3, e3.
    • (2007) PLoS Genet. , vol.3
    • Graubert, T.A.1
  • 8
    • 63449117467 scopus 로고    scopus 로고
    • Segmental copy number variation shapes tissue transcriptomes
    • Henrichsen, C.N. et al. (2009) Segmental copy number variation shapes tissue transcriptomes. Nat. Genet., 41, 424-429.
    • (2009) Nat. Genet. , vol.41 , pp. 424-429
    • Henrichsen, C.N.1
  • 9
    • 55549097836 scopus 로고    scopus 로고
    • Mapping short DNA sequencing reads and calling variants using mapping quality scores
    • Li, H. et al. (2008) Mapping short DNA sequencing reads and calling variants using mapping quality scores. Genome Res., 18, 1851-1858.
    • (2008) Genome Res. , vol.18 , pp. 1851-1858
    • Li, H.1
  • 10
    • 58249088497 scopus 로고    scopus 로고
    • Genomic imbalances in neonates with birth defects: high detection rates by using chromosomal microarray analysis
    • Lu ,X.Y. et al. (2008) Genomic imbalances in neonates with birth defects: high detection rates by using chromosomal microarray analysis. Pediatrics, 122, 1310-1318.
    • (2008) Pediatrics , vol.122 , pp. 1310-1318
    • Lu, X.Y.1
  • 11
    • 33646085110 scopus 로고    scopus 로고
    • Identification of DNA copy-number aberrations by arraycomparative genomic hybridization in patients with schizophrenia
    • Moon, H.J. et al. (2006) Identification of DNA copy-number aberrations by arraycomparative genomic hybridization in patients with schizophrenia. Biochem. Biophys. Res. Commun., 344, 531-539.
    • (2006) Biochem. Biophys. Res. Commun. , vol.344 , pp. 531-539
    • Moon, H.J.1
  • 12
    • 1542563409 scopus 로고    scopus 로고
    • Initial sequencing and comparative analysis of the mouse genome
    • Mouse Genome Sequencing Consortium
    • Mouse Genome Sequencing Consortium,Waterston, R.H. et al. (2002) Initial sequencing and comparative analysis of the mouse genome. Nature, 420, 520-562.
    • (2002) Nature , vol.420 , pp. 520-562
    • Waterston, R.H.1
  • 13
    • 33751329250 scopus 로고    scopus 로고
    • Global variation in copy number in the human genome
    • Redon, R. et al. (2006) Global variation in copy number in the human genome. Nature, 444, 444-454.
    • (2006) Nature , vol.444 , pp. 444-454
    • Redon, R.1
  • 14
    • 34247481814 scopus 로고    scopus 로고
    • Strong association of de novo copy number mutations with autism
    • Sebat, J. et al. (2007) Strong association of de novo copy number mutations with autism. Science, 316, 445-449.
    • (2007) Science , vol.316 , pp. 445-449
    • Sebat, J.1
  • 15
    • 34347348166 scopus 로고    scopus 로고
    • Challenges and standards in integrating surveys of structural variation
    • Scherer, S.W. et al. (2007) Challenges and standards in integrating surveys of structural variation. Nat. Genet., 39, S7-S15.
    • (2007) Nat. Genet. , vol.39
    • Scherer, S.W.1
  • 16
    • 46249114293 scopus 로고    scopus 로고
    • Mouse segmental duplication and copy number variation
    • She, X. et al. (2008) Mouse segmental duplication and copy number variation. Nat. Genet., 40, 909-914.
    • (2008) Nat. Genet. , vol.40 , pp. 909-914
    • She, X.1
  • 17
    • 64849083125 scopus 로고    scopus 로고
    • CNV-seq, a new method to detect copy number variation using high-throughput sequencing
    • Xie, C. and Tammi,M.T. (2009) CNV-seq, a new method to detect copy number variation using high-throughput sequencing. BMC Bioinformatics, 10, 80.
    • (2009) BMC Bioinformatics , vol.10 , pp. 80
    • Xie, C.1    Tammi, M.T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.