-
1
-
-
43749109187
-
Crystal structure of squid rhodopsin
-
Murakami, M.; Kouyama, T. Crystal Structure of Squid Rhodopsin. Nature 2008, 453, 363-367.
-
(2008)
Nature
, vol.453
, pp. 363-367
-
-
Murakami, M.1
Kouyama, T.2
-
2
-
-
49649086226
-
Crystal structure of squid rhodopsin with intracellularly extended cytoplasmic region
-
Shimamura, T.; Hiraki, N.; Takahashi, T.; Hori, H.; Ago, K.; Masuda, K.; Takio, M.; Ishiguro, M.; Miyano, M. Crystal Structure of Squid Rhodopsin with Intracellularly Extended Cytoplasmic Region. J. Biol. Chem. 2008, 283, 17753-17756.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 17753-17756
-
-
Shimamura, T.1
Hiraki, N.2
Takahashi, T.3
Hori, H.4
Ago, K.5
Masuda, K.6
Takio, M.7
Ishiguro, M.8
Miyano, M.9
-
4
-
-
77749319224
-
Insights from structural and spectral tuning studies on squid rhodopsin
-
DOI: 10.1002/ chem.200903194
-
Insights from Structural and Spectral Tuning Studies on Squid Rhodopsin. Chem.;Eur. J. 2010, DOI: 10.1002/ chem.200903194.
-
(2010)
Chem.;Eur. J.
-
-
-
5
-
-
0025653013
-
Photophysics and molecular electronic applications of the rhodopsins
-
Birge, R. R. Photophysics and Molecular Electronic Applications of the Rhodopsins. Annu. Rev. Phys. Chem. 1990, 41, 683-733.
-
(1990)
Annu. Rev. Phys. Chem.
, vol.41
, pp. 683-733
-
-
Birge, R.R.1
-
6
-
-
33746381417
-
Combining quantum mechanics methods with molecular mechanics methods in ONIOM
-
Vreven, T.;Byun,K. S.;Komáromi, I.;Dapprich, S.;Montgomery, J. A., Jr.; Morokuma, K.; Frisch, M. J. Combining Quantum Mechanics Methods with Molecular Mechanics Methods in ONIOM. J. Chem. Theory Comput. 2006, 2, 815-826.
-
(2006)
J. Chem. Theory Comput.
, vol.2
, pp. 815-826
-
-
Vreven, T.1
Byun, K.S.2
Komáromi, I.3
Dapprich, S.4
Montgomery Jr., J.A.5
Morokuma, K.6
Frisch, M.J.7
-
7
-
-
0345713551
-
Hybrid models for combined quanum mechanical and molecular mechanical approaches
-
Bakowies, D.; Thiel,W. Hybrid Models for Combined Quanum Mechanical and Molecular Mechanical Approaches. J. Phys. Chem. 1996, 100, 10580-10594.
-
(1996)
J. Phys. Chem.
, vol.100
, pp. 10580-10594
-
-
Bakowies, D.1
Thiel, W.2
-
8
-
-
0344667545
-
A spectroscopy oriented configuration interaction procedure
-
Neese, F. A Spectroscopy Oriented Configuration Interaction Procedure. J. Chem. Phys. 2003, 119, 9428-9443.
-
(2003)
J. Chem. Phys.
, vol.119
, pp. 9428-9443
-
-
Neese, F.1
-
9
-
-
58149170421
-
Mechanismof spectral tuning going from retinal in vacuo to bovine rhodopsin and itsmutants: Multireference Ab initio and quantummechanics/ molecular mechanics studies
-
Altun, A.; Yokoyama, S.;Morokuma, K.Mechanismof Spectral Tuning Going from Retinal in Vacuo to Bovine Rhodopsin and itsMutants:Multireference Ab Initio and QuantumMechanics/ Molecular Mechanics Studies. J. Phys. Chem. B. 2008, 112, 16883-16890.
-
(2008)
J. Phys. Chem. B.
, vol.112
, pp. 16883-16890
-
-
Altun, A.1
Yokoyama, S.2
Morokuma, K.3
-
10
-
-
24944574732
-
Solvent and protein effects on the structure and dynamics of the rhodopsin chromophore.
-
Röhrig, U. F.; Guidoni, L.; Rothilsberger, U. Solvent and Protein Effects on the Structure and Dynamics of the Rhodopsin Chromophore. ChemPhysChem 2005, 6, 1836-1847.
-
(2005)
ChemPhysChem
, vol.6
, pp. 1836-1847
-
-
Röhrig, U.F.1
Guidoni, L.2
Rothilsberger, U.3
-
11
-
-
35848936525
-
An opsin shift in rhodopsin: Retinal s0-s1 excitation in protein, in solution and in the gas phase
-
Bravaya, K.; Bochenkova, A.; Granovsky, A.; Nemukhin, A. An Opsin Shift in Rhodopsin: Retinal S0-S1 Excitation in Protein, in Solution and in the Gas Phase. J. Am. Chem. Soc. 2007, 129, 13035-13042.
-
(2007)
J. Am. Chem. Soc.
, vol.129
, pp. 13035-13042
-
-
Bravaya, K.1
Bochenkova, A.2
Granovsky, A.3
Nemukhin, A.4
-
12
-
-
0001612847
-
Femtosecond spectroscopy of 13-demethylrhodopsin visual pigment analogue: The role of nonbonded interactions in the isomerization process
-
Wang, Q.; Kochendoerfer, G. G.; Schoenlein, R.W.; Verdegem, P. J. E.; Lugtenburg, J.; Mathies, R. A.; Shank, C. V. Femtosecond Spectroscopy of 13-Demethylrhodopsin Visual Pigment Analogue: The Role of Nonbonded Interactions in the Isomerization Process. J. Phys. Chem. 1996, 100, 17388-17394.
-
(1996)
J. Phys. Chem.
, vol.100
, pp. 17388-17394
-
-
Wang, Q.1
Kochendoerfer, G.G.2
Schoenlein, R.W.3
Verdegem, P.J.E.4
Lugtenburg, J.5
Mathies, R.A.6
Shank, C.V.7
-
13
-
-
31144468743
-
Origin and consequences of steric strain in the rhodopsin binding pocket
-
Sugihara, M.; Hufen, J.; Buss, V. Origin and Consequences of Steric Strain in the Rhodopsin Binding Pocket. Biochemistry 2006, 45, 801-810.
-
(2006)
Biochemistry
, vol.45
, pp. 801-810
-
-
Sugihara, M.1
Hufen, J.2
Buss, V.3
-
15
-
-
0014194153
-
Vision in octopus and squid
-
Hara, T.; Hara, R.; Takeuchi, J. Vision in Octopus and Squid. Nature 1967, 214, 572-573.
-
(1967)
Nature
, vol.214
, pp. 572-573
-
-
Hara, T.1
Hara, R.2
Takeuchi, J.3
-
16
-
-
33645527222
-
Computational studies of the primary phototransduction event in visual rhodopsin
-
Gascon, J. A.; Sproviero, E. M.; Batista, V. Computational Studies of the Primary Phototransduction Event in Visual Rhodopsin. Acc. Chem. Res. 2006, 39, 184-193.
-
(2006)
Acc. Chem. Res.
, vol.39
, pp. 184-193
-
-
Gascon, J.A.1
Sproviero, E.M.2
Batista, V.3
-
17
-
-
33846807572
-
Protein assistance in the photoisomerization of rhodopsin and 9-cis-rhodopsin;insights fromexperiment and theory
-
Sekharan, S.; Sugihara, M.; Weingart, O.; Okada, T.; Buss, V. Protein Assistance in the Photoisomerization of Rhodopsin and 9-cis-Rhodopsin;Insights fromExperiment and Theory. J. Am. Chem. Soc. 2007, 129, 1052-1105
-
(2007)
J. Am. Chem. Soc.
, vol.129
, pp. 1052-1105
-
-
Sekharan, S.1
Sugihara, M.2
Weingart, O.3
Okada, T.4
Buss, V.5
-
18
-
-
34347212074
-
Coupled cluster studies of the lowest excited states of the 11-cis-retinal chromophore
-
Send, R.; Sundholm, D. Coupled Cluster Studies of the Lowest Excited States of the 11-cis-Retinal Chromophore. Phys. Chem. Chem. Phys. 2007, 9, 2862-2867.
-
(2007)
Phys. Chem. Chem. Phys.
, vol.9
, pp. 2862-2867
-
-
Send, R.1
Sundholm, D.2
-
19
-
-
0005853391
-
Two-photon spectroscopy of locked-11-cis-rhodopsin: Evidence for a protonated schiff base in the neutral protein binding site
-
Birge, R. R.; Murray, L. P.; Pierce, B. M.; Akita, H.; Balogh-Nair, V.; Findsen, L. A.; Nakanishi, K. Two-Photon Spectroscopy of Locked-11-cis- Rhodopsin: Evidence for a Protonated Schiff Base in the Neutral Protein Binding Site. Proc. Natl. Acad. Sci. U.S.A. 1985, 82, 4117-4121.
-
(1985)
Proc. Natl. Acad. Sci. U.S.A.
, vol.82
, pp. 4117-4121
-
-
Birge, R.R.1
Murray, L.P.2
Pierce, B.M.3
Akita, H.4
Balogh-Nair, V.5
Findsen, L.A.6
Nakanishi, K.7
-
20
-
-
0030174901
-
Fluorescent properties of protonated and unprotonated schiff bases of retinal at room temperature
-
Bachilo, S. M.; Bondarev, S. L.; Gillbro, T. Fluorescent Properties of Protonated and Unprotonated Schiff Bases of Retinal at Room Temperature. J. Photochem. Photobiol., B 1996, 34, 39-46.
-
(1996)
J. Photochem. Photobiol., B
, vol.34
, pp. 39-46
-
-
Bachilo, S.M.1
Bondarev, S.L.2
Gillbro, T.3
-
21
-
-
47249158505
-
The molecular structure of a curl-shaped retinal isomer
-
Send, R.; Sundholm, D. The Molecular Structure of a Curl-Shaped Retinal Isomer. J. Mol. Model. 2008, 14, 717-726.
-
(2008)
J. Mol. Model.
, vol.14
, pp. 717-726
-
-
Send, R.1
Sundholm, D.2
-
22
-
-
0018076990
-
Circular dichroism of squid rhodopsin and its intermediates
-
Shichida, S.; Tokunaga, F.; Yoshizawa, T. Circular Dichroism of Squid Rhodopsin and its Intermediates. Biochim. Biophys. Acta 1978, 504, 413-430.
-
(1978)
Biochim. Biophys. Acta
, vol.504
, pp. 413-430
-
-
Shichida, S.1
Tokunaga, F.2
Yoshizawa, T.3
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