메뉴 건너뛰기




Volumn 5, Issue 1, 2010, Pages

Parallel and convergent evolution of the dim-light vision gene RH1 in bats (order: Chiroptera)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; ARTICLE; BAT; BOOTSTRAPPING; CONE OPSIN GENE M/LWS; CONE OPSIN GENE SWS1; CONTROLLED STUDY; CONVERGENT EVOLUTION; ECOLOGICAL SPECIALIZATION; GENE; NIGHT VISION; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; ROD OPSIN GENE RH1;

EID: 77749249670     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0008838     Document Type: Article
Times cited : (36)

References (37)
  • 1
    • 52949133360 scopus 로고    scopus 로고
    • Evolution of dim-light and color vision pigments
    • Yokoyama S (2008) Evolution of dim-light and color vision pigments. Annu Rev Genomics Hum Genet 9: 259-282.
    • (2008) Annu Rev Genomics Hum Genet , vol.9 , pp. 259-282
    • Yokoyama, S.1
  • 2
    • 0028118719 scopus 로고
    • Phototransduction mechanism in retinal rods and cones. The Friedenwald Lecture
    • Yau KW (1994) Phototransduction mechanism in retinal rods and cones. The Friedenwald Lecture. Invest Ophthalmol Vis Sci 35: 9-32.
    • (1994) Invest Ophthalmol Vis Sci , vol.35 , pp. 9-32
    • Yau, K.W.1
  • 3
    • 0030484359 scopus 로고    scopus 로고
    • Adaptive evolution of photoreceptors and visual pigments in vertebrates
    • Yokoyama S, Yokoyama R (1996) Adaptive evolution of photoreceptors and visual pigments in vertebrates. Annu Rev Ecol Syst 27: 543-567.
    • (1996) Annu Rev Ecol Syst , vol.27 , pp. 543-567
    • Yokoyama, S.1    Yokoyama, R.2
  • 4
    • 0037376562 scopus 로고    scopus 로고
    • Evolution and selection of trichromatic vision in primates
    • Surridge AK, Osorio D, Mundy NI (2003) Evolution and selection of trichromatic vision in primates. Trends Ecol Evol 18: 198-205.
    • (2003) Trends Ecol Evol , vol.18 , pp. 198-205
    • Surridge, A.K.1    Osorio, D.2    Mundy, N.I.3
  • 5
    • 0035868699 scopus 로고    scopus 로고
    • Ecological importance of trichromatic vision to primates
    • Dominy NJ, Lucas PW (2001) Ecological importance of trichromatic vision to primates. Nature 410: 363-366.
    • (2001) Nature , vol.410 , pp. 363-366
    • Dominy, N.J.1    Lucas, P.W.2
  • 6
    • 70349666540 scopus 로고    scopus 로고
    • Evolution of colour vision in mammals
    • Jacobs GH (2009) Evolution of colour vision in mammals. Phil Trans R Soc B 364: 2957-2967.
    • (2009) Phil Trans R Soc B , vol.364 , pp. 2957-2967
    • Jacobs, G.H.1
  • 8
    • 0033064473 scopus 로고    scopus 로고
    • Cone receptor variations and their functional consequences in two species of hamster
    • Calderone JB, Jacobs GH (1999) Cone receptor variations and their functional consequences in two species of hamster. Vis Neurosci 16: 53-63.
    • (1999) Vis Neurosci , vol.16 , pp. 53-63
    • Calderone, J.B.1    Jacobs, G.H.2
  • 9
    • 0001387052 scopus 로고    scopus 로고
    • Cone types and cone/rod ratios in the crab-eating raccoon and coati (Procyonidae)
    • Peichl L, Pohl B (2000) Cone types and cone/rod ratios in the crab-eating raccoon and coati (Procyonidae). Invest Ophthalmol Vis Sci 41: S494.
    • (2000) Invest Ophthalmol Vis Sci , vol.41
    • Peichl, L.1    Pohl, B.2
  • 10
    • 70349663499 scopus 로고    scopus 로고
    • Evolution and spectral tuning of visual pigments in birds and mammals
    • Hunt DM, Carvalho LS, Cowing JA, Davies WL (2009) Evolution and spectral tuning of visual pigments in birds and mammals. Phil Trans R Soc B 364: 2941-2955.
    • (2009) Phil Trans R Soc B , vol.364 , pp. 2941-2955
    • Hunt, D.M.1    Carvalho, L.S.2    Cowing, J.A.3    Davies, W.L.4
  • 11
    • 33745116590 scopus 로고    scopus 로고
    • Ethanol and methanol as possible odor cues for Egyptian fruit bats (Rousettus aegyptiacus)
    • Sánchez F, Korine C, Steeghs M, Laarhoven LJ, Cristescu SM, et al. (2006) Ethanol and methanol as possible odor cues for Egyptian fruit bats (Rousettus aegyptiacus). J Chem Ecol 32: 1289-1300.
    • (2006) J Chem Ecol , vol.32 , pp. 1289-1300
    • Sánchez, F.1    Korine, C.2    Steeghs, M.3    Laarhoven, L.J.4    Cristescu, S.M.5
  • 12
    • 0037291150 scopus 로고    scopus 로고
    • The use of olfaction in the foraging behaviour of the golden-mantled flying fox, Pteropus pumilus, and the greater musky fruit bat, Ptenochirus jagori (Megachiroptera: Pteropodidae)
    • Luft S, Curio E, Tacud B (2003) The use of olfaction in the foraging behaviour of the golden-mantled flying fox, Pteropus pumilus, and the greater musky fruit bat, Ptenochirus jagori (Megachiroptera: Pteropodidae). Naturwissenschaften 90: 84-87.
    • (2003) Naturwissenschaften , vol.90 , pp. 84-87
    • Luft, S.1    Curio, E.2    Tacud, B.3
  • 14
    • 0032415508 scopus 로고    scopus 로고
    • Relative role of olfactory cues and certain non-olfactory factors in foraging of fruit-eating bats
    • Acharya KK, Roy A, Krishna A (1998) Relative role of olfactory cues and certain non-olfactory factors in foraging of fruit-eating bats. Behav Processes 44: 59-64.
    • (1998) Behav Processes , vol.44 , pp. 59-64
    • Acharya, K.K.1    Roy, A.2    Krishna, A.3
  • 16
    • 0034897661 scopus 로고    scopus 로고
    • Echolocation by insect-eating bats
    • Schnitzler HU, Kalko EKV (2001) Echolocation by insect-eating bats. Bioscience 51: 557-569.
    • (2001) Bioscience , vol.51 , pp. 557-569
    • Schnitzler, H.U.1    Kalko, E.K.V.2
  • 17
    • 0035161648 scopus 로고    scopus 로고
    • Sound localization in a new-world frugivorous bat, Artibeus jamaicensis: Acuity, use of binaural cues, and relationship to vision
    • Heffner RS, Koay G, Heffner HE (2001) Sound localization in a new-world frugivorous bat, Artibeus jamaicensis: acuity, use of binaural cues, and relationship to vision. J Acoust Soc Am 109: 412-421.
    • (2001) J Acoust Soc Am , vol.109 , pp. 412-421
    • Heffner, R.S.1    Koay, G.2    Heffner, H.E.3
  • 18
    • 58049216148 scopus 로고    scopus 로고
    • Bats and lighting
    • Fure A (2006) Bats and lighting. London Naturalist 85: 93-112.
    • (2006) London Naturalist , vol.85 , pp. 93-112
    • Fure, A.1
  • 19
    • 58049218566 scopus 로고    scopus 로고
    • The Photoreceptor Populations in the Retina of the Greater Horseshoe Bat Rhinolophus ferrumequinum
    • Kim TJ, Jeon YK, Lee JY, Lee ES, Jeon CJ (2008) The Photoreceptor Populations in the Retina of the Greater Horseshoe Bat Rhinolophus ferrumequinum. Mol Cells 26: 373-379.
    • (2008) Mol Cells , vol.26 , pp. 373-379
    • Kim, T.J.1    Jeon, Y.K.2    Lee, J.Y.3    Lee, E.S.4    Jeon, C.J.5
  • 21
    • 12844251802 scopus 로고    scopus 로고
    • A molecular phylogeny for bats illuminates biogeography and the fossil record
    • Teeling EC, Springer MS, Madsen O, Bates P, O'Brien SJ, et al. (2005) A molecular phylogeny for bats illuminates biogeography and the fossil record. Science 307: 580-584.
    • (2005) Science , vol.307 , pp. 580-584
    • Teeling, E.C.1    Springer, M.S.2    Madsen, O.3    Bates, P.4    O'Brien, S.J.5
  • 22
    • 0034642538 scopus 로고    scopus 로고
    • Molecular evidence regarding the origin of echolocation and flight in bats
    • Teeling EC, Scally M, Kao DJ, Romagnoli ML, Springer MS, et al. (2000) Molecular evidence regarding the origin of echolocation and flight in bats. Nature 403: 188-192.
    • (2000) Nature , vol.403 , pp. 188-192
    • Teeling, E.C.1    Scally, M.2    Kao, D.J.3    Romagnoli, M.L.4    Springer, M.S.5
  • 23
    • 51649122492 scopus 로고    scopus 로고
    • Elucidation of phenotypic adaptations: Molecular analyses of dim-light vision proteins in vertebrates
    • Yokoyama S, Tada T, Zhang H, Britt L (2008) Elucidation of phenotypic adaptations: molecular analyses of dim-light vision proteins in vertebrates. Proc Natl Acad Sci USA 105: 13480.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 13480
    • Yokoyama, S.1    Tada, T.2    Zhang, H.3    Britt, L.4
  • 25
    • 66149086564 scopus 로고    scopus 로고
    • Reliabilities of identifying positive selection by the branch-site and the site-prediction methods
    • Nozawa M, Suzuki Y, Nei M (2009) Reliabilities of identifying positive selection by the branch-site and the site-prediction methods. Proc Natl Acad Sci USA 106: 6700-6705.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 6700-6705
    • Nozawa, M.1    Suzuki, Y.2    Nei, M.3
  • 26
    • 39149126294 scopus 로고    scopus 로고
    • Primitive early Eocene bat from Wyoming and the evolution of flight and echolocation
    • Simmons NB, Seymour KL, Habersetzer J, Gunnell GF (2008) Primitive early Eocene bat from Wyoming and the evolution of flight and echolocation. Nature 451: 818-821.
    • (2008) Nature , vol.451 , pp. 818-821
    • Simmons, N.B.1    Seymour, K.L.2    Habersetzer, J.3    Gunnell, G.F.4
  • 27
    • 0034002482 scopus 로고    scopus 로고
    • Molecular evolution of vertebrate visual pigments
    • Yokoyama S (2000) Molecular evolution of vertebrate visual pigments. Prog Retin Eye Res 19: 385-419.
    • (2000) Prog Retin Eye Res , vol.19 , pp. 385-419
    • Yokoyama, S.1
  • 28
    • 34248551283 scopus 로고    scopus 로고
    • Bat echolocation calls: Adaptation and convergent evolution
    • Jones G, Holderied MW (2007) Bat echolocation calls: adaptation and convergent evolution. Proc R Soc Lond B 274: 905-912.
    • (2007) Proc R Soc Lond B , vol.274 , pp. 905-912
    • Jones, G.1    Holderied, M.W.2
  • 30
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL-X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 31
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • Posada D (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics 14: 817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1
  • 32
    • 84879793366 scopus 로고    scopus 로고
    • Swofford DL PAUP*: phylogenetic analysis using parsimony (* and other methods). version4.0.
    • Swofford DL PAUP*: phylogenetic analysis using parsimony (* and other methods). version4.0.
  • 34
    • 0022005270 scopus 로고
    • A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes
    • Li WH, Wu CI, Luo CC (1985) A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes. Mol Biol Evol 2: 150-174.
    • (1985) Mol Biol Evol , vol.2 , pp. 150-174
    • Li, W.H.1    Wu, C.I.2    Luo, C.C.3
  • 35
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang ZH (1997) PAML: a program package for phylogenetic analysis by maximum likelihood. Comput Appl Biosci 13: 555-556.
    • (1997) Comput Appl Biosci , vol.13 , pp. 555-556
    • Yang, Z.H.1
  • 36
    • 34547803197 scopus 로고    scopus 로고
    • PAML 4: Phylogenetic analysis by maximum likelihood
    • Yang Z (2007) PAML 4: Phylogenetic analysis by maximum likelihood. Mol Biol Evol 24: 1586-1591.
    • (2007) Mol Biol Evol , vol.24 , pp. 1586-1591
    • Yang, Z.1
  • 37
    • 27844439855 scopus 로고    scopus 로고
    • Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level
    • Zhang J, Nielsen R, Yang Z (2005) Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level. Mol Biol Evol 22: 2472-2479.
    • (2005) Mol Biol Evol , vol.22 , pp. 2472-2479
    • Zhang, J.1    Nielsen, R.2    Yang, Z.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.