-
1
-
-
13444249852
-
Prediction of cancer outcome with microarrays: A multiple random validation strategy
-
C. H. S. Michiels and S. Koscielny, "Prediction of cancer outcome with microarrays: A multiple random validation strategy," The Lancet, vol. 365, pp. 488-492, 2005.
-
(2005)
The Lancet
, vol.365
, pp. 488-492
-
-
Michiels, C.H.S.1
Koscielny, S.2
-
2
-
-
33846978784
-
Critical review of published microarray studies for cancer outcome and guildelines on statistical analysis and reporting
-
A. Dupuy and R. Simon, "Critical review of published microarray studies for cancer outcome and guildelines on statistical analysis and reporting," J. Nat. Cancer Inst., vol. 99, p. 147, 2007.
-
(2007)
J. Nat. Cancer Inst
, vol.99
, pp. 147
-
-
Dupuy, A.1
Simon, R.2
-
3
-
-
1342330535
-
Is cross-validation valid for microarray classification?
-
U. Braga-Neto and E. Dougherty, "Is cross-validation valid for microarray classification?," Bioinformatics, vol. 20, no. 3, pp. 374-380, 2004.
-
(2004)
Bioinformatics
, vol.20
, Issue.3
, pp. 374-380
-
-
Braga-Neto, U.1
Dougherty, E.2
-
4
-
-
85032751958
-
Fads and fallacies in the name of small-sample microarray classification
-
U. Braga-Neto, "Fads and fallacies in the name of small-sample microarray classification," IEEE Signal Processing Mag., vol. 24, no. 1, pp. 91-99, 2007.
-
(2007)
IEEE Signal Processing Mag
, vol.24
, Issue.1
, pp. 91-99
-
-
Braga-Neto, U.1
-
5
-
-
33947684240
-
Validation of computational methods in genomics
-
E. Dougherty, J. Hua, and M. Bittner, "Validation of computational methods in genomics," Curr. Genom., vol. 8, no. 1, pp. 1-19, 2007.
-
(2007)
Curr. Genom
, vol.8
, Issue.1
, pp. 1-19
-
-
Dougherty, E.1
Hua, J.2
Bittner, M.3
-
6
-
-
1042280954
-
Is cross-validation better than resubstitution for ranking genes?
-
U. Braga-Neto, R. Hashimoto, E. Dougherty, D. Nguyen, and R. Carroll, "Is cross-validation better than resubstitution for ranking genes?," Bioinformatics, vol. 20, no. 2, pp. 253-258, 2004.
-
(2004)
Bioinformatics
, vol.20
, Issue.2
, pp. 253-258
-
-
Braga-Neto, U.1
Hashimoto, R.2
Dougherty, E.3
Nguyen, D.4
Carroll, R.5
-
7
-
-
0001352933
-
Some examples of discrimination
-
C. Smith, "Some examples of discrimination," Ann. Eugen., vol. 18, pp. 272-282, 1947.
-
(1947)
Ann. Eugen
, vol.18
, pp. 272-282
-
-
Smith, C.1
-
8
-
-
84879799188
-
Estimation of error rates in discriminant analysis
-
P. Lachenbruch and M. Mickey, "Estimation of error rates in discriminant analysis," Technometrics, vol. 10, pp. 1-11, 1968.
-
(1968)
Technometrics
, vol.10
, pp. 1-11
-
-
Lachenbruch, P.1
Mickey, M.2
-
9
-
-
0346892470
-
Learning in pattern recognition
-
S. Watanabe, Ed. New York: Academic
-
T. Cover, "Learning in pattern recognition," in Methodologies of Pattern Recognition, S. Watanabe, Ed. New York: Academic, 1969, pp. 111-132.
-
(1969)
Methodologies of Pattern Recognition
, pp. 111-132
-
-
Cover, T.1
-
10
-
-
0014796565
-
Algorithms for recognizing contour-traced hand-printed characters
-
G. Toussaint and R. Donaldson, "Algorithms for recognizing contour-traced hand-printed characters," IEEE Trans. Comput., vol. 19, pp. 541-546, 1970.
-
(1970)
IEEE Trans. Comput
, vol.19
, pp. 541-546
-
-
Toussaint, G.1
Donaldson, R.2
-
11
-
-
0000629975
-
Cross-validatory choice and assessment of statistical predictions
-
M. Stone, "Cross-validatory choice and assessment of statistical predictions," J. Roy. Statist. Soc. Series B (Methodol.), vol. 36, pp. 111-147, 1974.
-
(1974)
J. Roy. Statist. Soc. Series B (Methodol.)
, vol.36
, pp. 111-147
-
-
Stone, M.1
-
12
-
-
11144357671
-
Expression profiling to predict postoperative prognosis for estrogen receptor-negative breast cancers by analysis of 25,344 genes on a cdna microarray
-
T. Nagahata et al., "Expression profiling to predict postoperative prognosis for estrogen receptor-negative breast cancers by analysis of 25,344 genes on a cdna microarray," Cancer Sci., vol. 95, no. 3, pp. 218-225, 2004.
-
(2004)
Cancer Sci
, vol.95
, Issue.3
, pp. 218-225
-
-
Nagahata, T.1
-
13
-
-
1642317557
-
Gene expression profile of adult t-cell acute lymphocytic leukemia identifies distinct subsets of patients with different response to therapy and survival
-
S. Chiaretti et al., "Gene expression profile of adult t-cell acute lymphocytic leukemia identifies distinct subsets of patients with different response to therapy and survival," Blood, vol. 103, no. 7, pp. 2771-2778, 2004.
-
(2004)
Blood
, vol.103
, Issue.7
, pp. 2771-2778
-
-
Chiaretti, S.1
-
14
-
-
33645363016
-
-
F. De Smet, N. Pochet, K. Engelen, T. Van Gorp, P. Van Hummelen, K. Marchal, F. Amant, D. Timmerman, B. De Moor, and I. Vergote, Predicting the clinical behavior of ovarian cancer from gene expression profiles, Int. J. Gynecol. Cancer, 16, no. Suppl 1, pp. 147-151, 2006.
-
F. De Smet, N. Pochet, K. Engelen, T. Van Gorp, P. Van Hummelen, K. Marchal, F. Amant, D. Timmerman, B. De Moor, and I. Vergote, "Predicting the clinical behavior of ovarian cancer from gene expression profiles," Int. J. Gynecol. Cancer, vol. 16, no. Suppl 1, pp. 147-151, 2006.
-
-
-
-
15
-
-
38749094406
-
A three-gene predictor for early intrahepatic recurrence of hepatocellular carcinoma after curative hepatectomy
-
H. Somura, N. Iizuka, T. Tamesa, K. Sakamoto, T. Hamaguchi, R. Tsunedomi, H. Yamada-Okabe, M. Sawamura, M. Eramoto, T. Miyamoto, Y. Hamamoto, and M. Oka, "A three-gene predictor for early intrahepatic recurrence of hepatocellular carcinoma after curative hepatectomy," Oncol. Rep., vol. 19, no. 2, pp. 489-495, 2008.
-
(2008)
Oncol. Rep
, vol.19
, Issue.2
, pp. 489-495
-
-
Somura, H.1
Iizuka, N.2
Tamesa, T.3
Sakamoto, K.4
Hamaguchi, T.5
Tsunedomi, R.6
Yamada-Okabe, H.7
Sawamura, M.8
Eramoto, M.9
Miyamoto, T.10
Hamamoto, Y.11
Oka, M.12
-
16
-
-
37549007198
-
Gene expression-based molecular diagnostic system for malignant gliomas is superior to histological diagnosis
-
M. Shirahata, K. Iwao-Koizumi, S. Saito, N. Ueno, M. Oda, N. Hashimoto, J. Takahashi, and K. Kato, "Gene expression-based molecular diagnostic system for malignant gliomas is superior to histological diagnosis," Clin. Cancer Res., vol. 13, no. 24, pp. 7341-7356, 2007.
-
(2007)
Clin. Cancer Res
, vol.13
, Issue.24
, pp. 7341-7356
-
-
Shirahata, M.1
Iwao-Koizumi, K.2
Saito, S.3
Ueno, N.4
Oda, M.5
Hashimoto, N.6
Takahashi, J.7
Kato, K.8
-
17
-
-
37349051638
-
Microarray-based prediction of tumor response to neoadjuvant radiochemotherapy of patients with locally advanced rectal cancer
-
C. Rimkus, J. Friederichs, A. Boulesteix, J. Theisen, J. Mages, K. Becker, H. Nekarda, R. Rosenberg, K. Janssen, and J. Siewert, "Microarray-based prediction of tumor response to neoadjuvant radiochemotherapy of patients with locally advanced rectal cancer," Clin. Gastroenterol. Hepatol., vol. 6, no. 1, pp. 53-61, 2008.
-
(2008)
Clin. Gastroenterol. Hepatol
, vol.6
, Issue.1
, pp. 53-61
-
-
Rimkus, C.1
Friederichs, J.2
Boulesteix, A.3
Theisen, J.4
Mages, J.5
Becker, K.6
Nekarda, H.7
Rosenberg, R.8
Janssen, K.9
Siewert, J.10
-
18
-
-
40349111098
-
Expression profiling to predict the clinical behaviour of ovarian cancer fails independent evaluation
-
O. Gevaert, F. De Smet, T. Van Gorp, N. Pochet, K. Engelen, F. Amant, B. De Moor, D. Timmerman, and I. Vergote, "Expression profiling to predict the clinical behaviour of ovarian cancer fails independent evaluation," BMC Cancer, vol. 8, p. 18, 2008.
-
(2008)
BMC Cancer
, vol.8
, pp. 18
-
-
Gevaert, O.1
De Smet, F.2
Van Gorp, T.3
Pochet, N.4
Engelen, K.5
Amant, F.6
De Moor, B.7
Timmerman, D.8
Vergote, I.9
-
20
-
-
0020100273
-
Statistical properties of error estimators in performance assessment of recognition systems
-
J. Kittler and P. DeVijver, "Statistical properties of error estimators in performance assessment of recognition systems," IEEE Trans. Pattern Anal. Machine Intell., vol. 4, pp. 215-220, 1982.
-
(1982)
IEEE Trans. Pattern Anal. Machine Intell
, vol.4
, pp. 215-220
-
-
Kittler, J.1
DeVijver, P.2
-
21
-
-
0001020401
-
Recent advances in error rate estimation
-
D. Hand, "Recent advances in error rate estimation," Pattern Recogn. Lett., vol. 4, pp. 335-346, 1986.
-
(1986)
Pattern Recogn. Lett
, vol.4
, pp. 335-346
-
-
Hand, D.1
-
22
-
-
0001165055
-
Frequency distribution of the values of the correlation coefficient in samples from an indefinitely large population
-
R. Fisher, "Frequency distribution of the values of the correlation coefficient in samples from an indefinitely large population," Biometrika, vol. 10, pp. 507-521, 1915.
-
(1915)
Biometrika
, vol.10
, pp. 507-521
-
-
Fisher, R.1
-
23
-
-
0002532939
-
On the probable error of a coefficient of correlation deduced from a small sample
-
R. Fisher, "On the probable error of a coefficient of correlation deduced from a small sample," Metron, vol. 1, pp. 3-32, 1921.
-
(1921)
Metron
, vol.1
, pp. 3-32
-
-
Fisher, R.1
-
24
-
-
0001727379
-
The general sampling distribution of the multiple correlation coefficient
-
R. Fisher, "The general sampling distribution of the multiple correlation coefficient," Proc. Roy. Soc., Ser. A., vol. 121, pp. 654-673, 1928.
-
(1928)
Proc. Roy. Soc., Ser. A
, vol.121
, pp. 654-673
-
-
Fisher, R.1
-
25
-
-
33745886270
-
Classifier technology and the illusion of progress
-
D. Hand, "Classifier technology and the illusion of progress," Statistic. Sci., vol. 21, pp. 1-14, 2006.
-
(2006)
Statistic. Sci
, vol.21
, pp. 1-14
-
-
Hand, D.1
-
26
-
-
2642576537
-
Classifier performance as a function of distributional complexity
-
S. Attoor and E. Dougherty, "Classifier performance as a function of distributional complexity," Pattern Recogn., vol. 37, no. 8, pp. 1629-1640, 2004.
-
(2004)
Pattern Recogn
, vol.37
, Issue.8
, pp. 1629-1640
-
-
Attoor, S.1
Dougherty, E.2
-
27
-
-
0000764772
-
The use of multiple measurements in taxonomic problems
-
R. Fisher, "The use of multiple measurements in taxonomic problems," Ann. Eugen., vol. 7, pp. 179-188, 1936.
-
(1936)
Ann. Eugen
, vol.7
, pp. 179-188
-
-
Fisher, R.1
-
28
-
-
0000776643
-
On a statistical problem arising in the classification of an individual into one of two groups
-
A. Wald, "On a statistical problem arising in the classification of an individual into one of two groups," Ann. Math. Statist., vol. 15, pp. 145-162, 1944.
-
(1944)
Ann. Math. Statist
, vol.15
, pp. 145-162
-
-
Wald, A.1
-
29
-
-
0001893585
-
Classification by multivariate analysis
-
T. Anderson, "Classification by multivariate analysis," Psychometrika, vol. 16, pp. 31-50, 1951.
-
(1951)
Psychometrika
, vol.16
, pp. 31-50
-
-
Anderson, T.1
-
30
-
-
0007284561
-
Errors in discrimination
-
S. John, "Errors in discrimination," Ann. Math. Statist., vol. 32, pp. 1125-1144, 1961.
-
(1961)
Ann. Math. Statist
, vol.32
, pp. 1125-1144
-
-
John, S.1
-
31
-
-
0344853942
-
Some results on the distribution of the w-classification
-
H. Solomon, Ed. Stanford, CA: Stanford University Press
-
R. Sitgreaves, "Some results on the distribution of the w-classification," in Studies in Item Analysis and Prediction, H. Solomon, Ed. Stanford, CA: Stanford University Press, 1961, pp. 241-251.
-
(1961)
Studies in Item Analysis and Prediction
, pp. 241-251
-
-
Sitgreaves, R.1
-
32
-
-
0005474168
-
2 and anderson's classification statistic w in terms of simple statistics
-
H. Solomon, Ed. Stanford, CA: Stanford University Press
-
2 and anderson's classification statistic w in terms of simple statistics," in Studies in Item Analysis and Prediction, H. Solomon, Ed. Stanford, CA: Stanford University Press, 1961, pp. 285-292.
-
(1961)
Studies in Item Analysis and Prediction
, pp. 285-292
-
-
Bowker, A.1
-
33
-
-
0011541276
-
An asymptotic expansion for the distribution function of the w-classification statistic
-
H. Solomon, Ed. Stanford, CA: Stanford University Press
-
A. Bowker and R. Sitgreaves, "An asymptotic expansion for the distribution function of the w-classification statistic," in Studies in Item Analysis and Prediction, H. Solomon, Ed. Stanford, CA: Stanford University Press, 1961, pp. 292-310.
-
(1961)
Studies in Item Analysis and Prediction
, pp. 292-310
-
-
Bowker, A.1
Sitgreaves, R.2
-
34
-
-
19844365187
-
On the distribution of wald's classification statistics
-
H. Harter, "On the distribution of wald's classification statistics," Ann. Math. Statist., vol. 22, pp. 58-67, 1951.
-
(1951)
Ann. Math. Statist
, vol.22
, pp. 58-67
-
-
Harter, H.1
-
35
-
-
0000475366
-
On the distribution of two random matrices used in classification procedures
-
R. Sitgreaves, "On the distribution of two random matrices used in classification procedures," Ann. Math. Statist., vol. 23, pp. 263-270, 1951.
-
(1951)
Ann. Math. Statist
, vol.23
, pp. 263-270
-
-
Sitgreaves, R.1
-
36
-
-
67649401077
-
Computation of an empirical sampling distribution for the w-classification statistic
-
H. Solomon, Ed. Stanford, CA: Stanford University Press
-
D. Teichroew and R. Sitgreaves, "Computation of an empirical sampling distribution for the w-classification statistic," in Studies in Item Analysis and Prediction, H. Solomon, Ed. Stanford, CA: Stanford University Press, 1961, pp. 285-292.
-
(1961)
Studies in Item Analysis and Prediction
, pp. 285-292
-
-
Teichroew, D.1
Sitgreaves, R.2
-
37
-
-
0007300760
-
An asymptotic expansion for the distribution of the linear discriminant function
-
M. Okamoto, "An asymptotic expansion for the distribution of the linear discriminant function," Ann. Math. Statist., vol. 39, pp. 1358-1359, 1968.
-
(1968)
Ann. Math. Statist
, vol.39
, pp. 1358-1359
-
-
Okamoto, M.1
-
38
-
-
0347214604
-
Some results on the distribution of two random matrices used in classification procedures
-
D. Kabe, "Some results on the distribution of two random matrices used in classification procedures," Ann. Math. Statist., vol. 34, pp. 181-185, 1963.
-
(1963)
Ann. Math. Statist
, vol.34
, pp. 181-185
-
-
Kabe, D.1
-
39
-
-
0003093479
-
Allocation rules and their error rates
-
M. Hills, "Allocation rules and their error rates," J. Roy. Statistic. Soc. Series B (Methodol.), vol. 28, no. 1, pp. 1-31, 1966.
-
(1966)
J. Roy. Statistic. Soc. Series B (Methodol.)
, vol.28
, Issue.1
, pp. 1-31
-
-
Hills, M.1
-
40
-
-
85041937814
-
On the expectation of errors of allocation associated with a linear discriminant function
-
M. Moran, "On the expectation of errors of allocation associated with a linear discriminant function," Biometrika, vol. 62, no. 1, pp. 141-148, 1975.
-
(1975)
Biometrika
, vol.62
, Issue.1
, pp. 141-148
-
-
Moran, M.1
-
41
-
-
85042336383
-
The bias of the apparent error in discriminant analysis
-
G. McLachlan, "The bias of the apparent error in discriminant analysis," Biometrika, vol. 63, no. 2, pp. 239-244, 1976.
-
(1976)
Biometrika
, vol.63
, Issue.2
, pp. 239-244
-
-
McLachlan, G.1
-
42
-
-
67649396277
-
Comparison of the estimates of the probability of misclassification
-
Kyoto, Japan
-
S. Raudys, "Comparison of the estimates of the probability of misclassification," in Proc. 4th Int. Conf. Pattern Recogn., Kyoto, Japan, 1978, pp. 280-282.
-
(1978)
Proc. 4th Int. Conf. Pattern Recogn
, pp. 280-282
-
-
Raudys, S.1
-
43
-
-
0015395891
-
Considerations of sample and feature size
-
D. Foley, "Considerations of sample and feature size," IEEE Trans. Inf. Theory, vol. IT-18, pp. 618-626, 1972.
-
(1972)
IEEE Trans. Inf. Theory
, vol.IT-18
, pp. 618-626
-
-
Foley, D.1
-
44
-
-
0018253340
-
On the optimal number of features in the classification of multivariate Gaussian data
-
A. Jain and W. Waller, "On the optimal number of features in the classification of multivariate Gaussian data," Pattern Recogn., vol. 10, pp. 365-374, 1978.
-
(1978)
Pattern Recogn
, vol.10
, pp. 365-374
-
-
Jain, A.1
Waller, W.2
-
45
-
-
67649390743
-
On the sampling distribution of resubstitution and leave-one-out error estimators for linear classifiers
-
Nov
-
A. Zollanvari, U. Braga-Neto, and E. R. Dougherty, "On the sampling distribution of resubstitution and leave-one-out error estimators for linear classifiers," Pattern Recognit., vol. 42, no. 11, pp. 2705-2723, Nov. 2009.
-
(2009)
Pattern Recognit
, vol.42
, Issue.11
, pp. 2705-2723
-
-
Zollanvari, A.1
Braga-Neto, U.2
Dougherty, E.R.3
-
46
-
-
0036925884
-
Methods for the computation of multivariate t-probabilities
-
A. Genz and F. Bretz, "Methods for the computation of multivariate t-probabilities," J. Stat. Comp. Simul., vol. 11, pp. 950-971, 2002.
-
(2002)
J. Stat. Comp. Simul
, vol.11
, pp. 950-971
-
-
Genz, A.1
Bretz, F.2
-
47
-
-
0037137519
-
A gene-expression signature as a predictor of survival in breast cancer
-
Dec
-
M. van de Vijver, Y. He, L. van't Veer, H. Dai, A. Hart, D. Voskuil, G. Schreiber, J. Peterse, C. Roberts, M. Marton, M. Parrish, D. Astma, A. Witteveen, A. Glas, L. Delahaye, T. van der Velde, H. Bartelink, S. Rodenhuis, E. Rutgers, S. Friend, and R. Bernards, "A gene-expression signature as a predictor of survival in breast cancer," The New England J. Med., vol. 347, pp. 1999-2009, Dec. 2002.
-
(2002)
The New England J. Med
, vol.347
, pp. 1999-2009
-
-
van de Vijver, M.1
He, Y.2
van't Veer, L.3
Dai, H.4
Hart, A.5
Voskuil, D.6
Schreiber, G.7
Peterse, J.8
Roberts, C.9
Marton, M.10
Parrish, M.11
Astma, D.12
Witteveen, A.13
Glas, A.14
Delahaye, L.15
van der Velde, T.16
Bartelink, H.17
Rodenhuis, S.18
Rutgers, E.19
Friend, S.20
Bernards, R.21
more..
-
48
-
-
37649015028
-
Decorrelation of the true and estimated classifier errors in high-dimensional settings
-
Article ID 38473
-
B. Hanczar, J. Hua, and E. Dougherty, "Decorrelation of the true and estimated classifier errors in high-dimensional settings," EURASIP J. Bioinform. Syst. Biol., vol. 2007, p. 12, 2007, Article ID 38473.
-
(2007)
EURASIP J. Bioinform. Syst. Biol
, vol.2007
, pp. 12
-
-
Hanczar, B.1
Hua, J.2
Dougherty, E.3
|