Performance assessment PCR-based assays targeting Bacteroidales genetic markers of bovine fecal pollution

Applied and Environmental Microbiology

Volumn 76, Issue 5, 2010, Pages 1359-1366

  Shanks, Orin C ^a   White, Karen ^a   Kelty, Catherine A ^a   Hayes, Sam ^a   Sivaganesan, Mano ^a   Jenkins, Michael ^b   Varma, Manju ^c   Haugland, Richard A ^c  

^a U S ENVIRONMENTAL PROTECTION AGENCY   (United States)

^b AGRICULTURAL RESEARCH SERVICE   (United States)

^c U S ENVIRONMENTAL PROTECTION AGENCY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

16S RRNA GENE SEQUENCE; AMBIENT WATERS; ANIMAL SPECIES; APRIORI; BOVINE FECES; DNA EXTRACTS; END POINTS; FECAL DNA; FECAL POLLUTION; FECAL SAMPLES; FIELD APPLICATION; GENETIC MARKERS; MICROBIAL SOURCES; PERFORMANCE ASSESSMENT; PERFORMANCE EVALUATION; REAL-TIME QUANTITATIVE PCR; REFERENCE COLLECTIONS; TRACKING APPLICATION;

DNA; GENES; POINT CONTACTS; POLYMERASE CHAIN REACTION; RNA; WATER POLLUTION;

ASSAYS;

BACTERIAL DNA; RIBOSOME DNA; RNA 16S;

BACTERIUM; CATTLE; FECAL PELLET; GENE; GENETIC MARKER; POLYMERASE CHAIN REACTION; POPULATION DISTRIBUTION;

ANIMAL; ARTICLE; BACTEROIDETES; CATTLE; CLASSIFICATION; COMPARATIVE STUDY; EVALUATION; FECES; GENETIC MARKER; GENETICS; ISOLATION AND PURIFICATION; METHODOLOGY; MICROBIOLOGY; POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; WATER POLLUTANT;

ANIMALS; BACTEROIDETES; CATTLE; DNA, BACTERIAL; DNA, RIBOSOMAL; FECES; GENETIC MARKERS; POLYMERASE CHAIN REACTION; RNA, RIBOSOMAL, 16S; SENSITIVITY AND SPECIFICITY; WATER POLLUTANTS;

ANIMALIA; BACTEROIDALES; BOVIDAE; BOVINAE;

EID: 77649221029     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.02033-09     Document Type: Article

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